Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC5.52□□□□□ -1.53
UPF2Q9HAU5 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC5.52□□□□□ -1.53
UPF2Q9HAU5 IGLV2-34-201ENST00000490007 283 ntBASIC5.52□□□□□ -1.53
UPF2Q9HAU5 RPL36AP41-201ENST00000493820 306 ntBASIC5.52□□□□□ -1.53
UPF2Q9HAU5 RPL37AP8-201ENST00000494116 276 ntBASIC5.52□□□□□ -1.53
UPF2Q9HAU5 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC5.52□□□□□ -1.53
UPF2Q9HAU5 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC5.52□□□□□ -1.53
UPF2Q9HAU5 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC5.52□□□□□ -1.53
UPF2Q9HAU5 RFPL4AP3-201ENST00000515267 345 ntBASIC5.52□□□□□ -1.53
UPF2Q9HAU5 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC5.52□□□□□ -1.53
UPF2Q9HAU5 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC5.52□□□□□ -1.53
UPF2Q9HAU5 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC5.52□□□□□ -1.53
UPF2Q9HAU5 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC5.52□□□□□ -1.53
UPF2Q9HAU5 AC125612.1-201ENST00000547580 377 ntBASIC5.52□□□□□ -1.53
UPF2Q9HAU5 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC5.52□□□□□ -1.53
UPF2Q9HAU5 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC5.52□□□□□ -1.53
UPF2Q9HAU5 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC5.52□□□□□ -1.53
UPF2Q9HAU5 AL731537.2-201ENST00000561565 951 ntBASIC5.52□□□□□ -1.53
UPF2Q9HAU5 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC5.52□□□□□ -1.53
UPF2Q9HAU5 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC5.52□□□□□ -1.53
UPF2Q9HAU5 BPIFA4P-203ENST00000603168 689 ntBASIC5.52□□□□□ -1.53
UPF2Q9HAU5 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC5.52□□□□□ -1.53
UPF2Q9HAU5 TEX41-256ENST00000626411 368 ntTSL 5 BASIC5.52□□□□□ -1.53
UPF2Q9HAU5 AL355480.1-201ENST00000629041 99 ntBASIC5.52□□□□□ -1.53
UPF2Q9HAU5 UOX-205ENST00000640983 544 ntTSL 4 BASIC5.52□□□□□ -1.53
UPF2Q9HAU5 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC5.52□□□□□ -1.53
UPF2Q9HAU5 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC5.52□□□□□ -1.53
UPF2Q9HAU5 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC5.52□□□□□ -1.53
UPF2Q9HAU5 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
UPF2Q9HAU5 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
UPF2Q9HAU5 OR14L1P-202ENST00000641545 3009 ntBASIC5.51□□□□□ -1.53
UPF2Q9HAU5 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC5.51□□□□□ -1.53
UPF2Q9HAU5 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC5.51□□□□□ -1.53
UPF2Q9HAU5 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
UPF2Q9HAU5 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
UPF2Q9HAU5 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC5.51□□□□□ -1.53
UPF2Q9HAU5 AC011266.1-201ENST00000624119 3569 ntBASIC5.51□□□□□ -1.53
UPF2Q9HAU5 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC5.51□□□□□ -1.53
UPF2Q9HAU5 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
UPF2Q9HAU5 RN7SKP95-201ENST00000362860 303 ntBASIC5.51□□□□□ -1.53
UPF2Q9HAU5 SNORA71.2-201ENST00000364941 134 ntBASIC5.51□□□□□ -1.53
UPF2Q9HAU5 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
UPF2Q9HAU5 AC092642.1-201ENST00000392417 425 ntBASIC5.51□□□□□ -1.53
UPF2Q9HAU5 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC5.51□□□□□ -1.53
UPF2Q9HAU5 AC140479.3-201ENST00000418944 1126 ntBASIC5.51□□□□□ -1.53
UPF2Q9HAU5 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC5.51□□□□□ -1.53
UPF2Q9HAU5 OR2B7P-201ENST00000429302 934 ntBASIC5.51□□□□□ -1.53
UPF2Q9HAU5 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC5.51□□□□□ -1.53
UPF2Q9HAU5 RPL7P33-201ENST00000444159 742 ntBASIC5.51□□□□□ -1.53
UPF2Q9HAU5 PPIAP20-201ENST00000449839 135 ntBASIC5.51□□□□□ -1.53
UPF2Q9HAU5 AC016687.1-201ENST00000482574 353 ntBASIC5.51□□□□□ -1.53
UPF2Q9HAU5 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC5.51□□□□□ -1.53
UPF2Q9HAU5 AC025445.1-201ENST00000502728 300 ntBASIC5.51□□□□□ -1.53
UPF2Q9HAU5 SCARNA22-201ENST00000503991 125 ntBASIC5.51□□□□□ -1.53
UPF2Q9HAU5 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
UPF2Q9HAU5 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC5.51□□□□□ -1.53
UPF2Q9HAU5 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
UPF2Q9HAU5 RNU4-18P-201ENST00000516751 149 ntBASIC5.51□□□□□ -1.53
UPF2Q9HAU5 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC5.51□□□□□ -1.53
UPF2Q9HAU5 IFITM8P-201ENST00000522529 394 ntBASIC5.51□□□□□ -1.53
UPF2Q9HAU5 AC069240.1-201ENST00000548774 375 ntBASIC5.51□□□□□ -1.53
UPF2Q9HAU5 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC5.51□□□□□ -1.53
UPF2Q9HAU5 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC5.51□□□□□ -1.53
UPF2Q9HAU5 MIR3176-201ENST00000582210 90 ntBASIC5.51□□□□□ -1.53
UPF2Q9HAU5 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC5.51□□□□□ -1.53
UPF2Q9HAU5 AC005972.3-201ENST00000606304 481 ntBASIC5.51□□□□□ -1.53
UPF2Q9HAU5 AL008729.2-201ENST00000606393 473 ntBASIC5.51□□□□□ -1.53
UPF2Q9HAU5 AC015813.4-201ENST00000610469 179 ntBASIC5.51□□□□□ -1.53
UPF2Q9HAU5 MIR6862-1-201ENST00000613016 70 ntBASIC5.51□□□□□ -1.53
UPF2Q9HAU5 MIR6862-2-201ENST00000614755 70 ntBASIC5.51□□□□□ -1.53
UPF2Q9HAU5 AC007546.2-201ENST00000623996 360 ntBASIC5.51□□□□□ -1.53
UPF2Q9HAU5 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
UPF2Q9HAU5 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC5.5□□□□□ -1.53
UPF2Q9HAU5 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
UPF2Q9HAU5 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
UPF2Q9HAU5 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC5.5□□□□□ -1.53
UPF2Q9HAU5 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
UPF2Q9HAU5 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
UPF2Q9HAU5 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
UPF2Q9HAU5 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC5.5□□□□□ -1.53
UPF2Q9HAU5 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
UPF2Q9HAU5 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
UPF2Q9HAU5 RNA5SP307-201ENST00000362863 116 ntBASIC5.5□□□□□ -1.53
UPF2Q9HAU5 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC5.5□□□□□ -1.53
UPF2Q9HAU5 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC5.5□□□□□ -1.53
UPF2Q9HAU5 CHMP1B2P-201ENST00000399581 597 ntBASIC5.5□□□□□ -1.53
UPF2Q9HAU5 RNA5SP104-201ENST00000410989 118 ntBASIC5.5□□□□□ -1.53
UPF2Q9HAU5 AL160275.2-201ENST00000412010 394 ntBASIC5.5□□□□□ -1.53
UPF2Q9HAU5 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC5.5□□□□□ -1.53
UPF2Q9HAU5 RPS23P10-201ENST00000416185 486 ntBASIC5.5□□□□□ -1.53
UPF2Q9HAU5 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC5.5□□□□□ -1.53
UPF2Q9HAU5 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC5.5□□□□□ -1.53
UPF2Q9HAU5 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
UPF2Q9HAU5 HLA-N-201ENST00000437516 135 ntBASIC5.5□□□□□ -1.53
UPF2Q9HAU5 OR1H1P-201ENST00000448731 937 ntBASIC5.5□□□□□ -1.53
UPF2Q9HAU5 AC108463.1-201ENST00000450258 347 ntBASIC5.5□□□□□ -1.53
UPF2Q9HAU5 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
UPF2Q9HAU5 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
UPF2Q9HAU5 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC5.5□□□□□ -1.53
UPF2Q9HAU5 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms