Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 BX842559.2-201ENST00000451418 605 ntBASIC5.39□□□□□ -1.55
ATG4AQ8WYN0 ART2BP-201ENST00000453501 499 ntBASIC5.39□□□□□ -1.55
ATG4AQ8WYN0 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC5.39□□□□□ -1.55
ATG4AQ8WYN0 PSMC1P13-201ENST00000458195 985 ntBASIC5.39□□□□□ -1.55
ATG4AQ8WYN0 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC5.39□□□□□ -1.55
ATG4AQ8WYN0 AC069528.1-202ENST00000482888 637 ntBASIC5.39□□□□□ -1.55
ATG4AQ8WYN0 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC5.39□□□□□ -1.55
ATG4AQ8WYN0 HPRT1P2-201ENST00000505250 544 ntBASIC5.39□□□□□ -1.55
ATG4AQ8WYN0 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC5.39□□□□□ -1.55
ATG4AQ8WYN0 AC008565.1-201ENST00000509046 885 ntBASIC5.39□□□□□ -1.55
ATG4AQ8WYN0 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC5.39□□□□□ -1.55
ATG4AQ8WYN0 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC5.39□□□□□ -1.55
ATG4AQ8WYN0 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC5.39□□□□□ -1.55
ATG4AQ8WYN0 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC5.39□□□□□ -1.55
ATG4AQ8WYN0 OR5AK3P-201ENST00000527486 1297 ntBASIC5.39□□□□□ -1.55
ATG4AQ8WYN0 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC5.39□□□□□ -1.55
ATG4AQ8WYN0 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC5.39□□□□□ -1.55
ATG4AQ8WYN0 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC5.39□□□□□ -1.55
ATG4AQ8WYN0 DUX4L52-201ENST00000549363 777 ntBASIC5.39□□□□□ -1.55
ATG4AQ8WYN0 AC006349.1-201ENST00000555526 235 ntBASIC5.39□□□□□ -1.55
ATG4AQ8WYN0 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC5.39□□□□□ -1.55
ATG4AQ8WYN0 HMGN2P47-201ENST00000559378 272 ntBASIC5.39□□□□□ -1.55
ATG4AQ8WYN0 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.39□□□□□ -1.55
ATG4AQ8WYN0 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC5.39□□□□□ -1.55
ATG4AQ8WYN0 PDCD6IPP2-207ENST00000566321 1069 ntBASIC5.39□□□□□ -1.55
ATG4AQ8WYN0 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC5.39□□□□□ -1.55
ATG4AQ8WYN0 AC109446.2-201ENST00000567872 497 ntBASIC5.39□□□□□ -1.55
ATG4AQ8WYN0 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
ATG4AQ8WYN0 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC5.39□□□□□ -1.55
ATG4AQ8WYN0 AC146944.4-201ENST00000602697 718 ntBASIC5.39□□□□□ -1.55
ATG4AQ8WYN0 AC009237.15-201ENST00000610252 501 ntBASIC5.39□□□□□ -1.55
ATG4AQ8WYN0 AC073869.10-201ENST00000642016 354 ntBASIC5.39□□□□□ -1.55
ATG4AQ8WYN0 LINC02211-204ENST00000642024 1070 ntBASIC5.39□□□□□ -1.55
ATG4AQ8WYN0 AL513185.3-201ENST00000433335 1300 ntBASIC5.39□□□□□ -1.55
ATG4AQ8WYN0 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
ATG4AQ8WYN0 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
ATG4AQ8WYN0 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.39□□□□□ -1.55
ATG4AQ8WYN0 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.39□□□□□ -1.55
ATG4AQ8WYN0 AL442128.2-201ENST00000620246 1824 ntBASIC5.39□□□□□ -1.55
ATG4AQ8WYN0 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
ATG4AQ8WYN0 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
ATG4AQ8WYN0 AC104623.2-202ENST00000623477 4002 ntBASIC5.39□□□□□ -1.55
ATG4AQ8WYN0 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
ATG4AQ8WYN0 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
ATG4AQ8WYN0 AC012078.1-201ENST00000405035 1646 ntBASIC5.38□□□□□ -1.55
ATG4AQ8WYN0 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
ATG4AQ8WYN0 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
ATG4AQ8WYN0 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
ATG4AQ8WYN0 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.38□□□□□ -1.55
ATG4AQ8WYN0 METTL21EP-201ENST00000298105 713 ntBASIC5.38□□□□□ -1.55
ATG4AQ8WYN0 RNU4-7P-201ENST00000364758 141 ntBASIC5.38□□□□□ -1.55
ATG4AQ8WYN0 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5.38□□□□□ -1.55
ATG4AQ8WYN0 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC5.38□□□□□ -1.55
ATG4AQ8WYN0 KCTD9P1-201ENST00000430462 1167 ntBASIC5.38□□□□□ -1.55
ATG4AQ8WYN0 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC5.38□□□□□ -1.55
ATG4AQ8WYN0 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC5.38□□□□□ -1.55
ATG4AQ8WYN0 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
ATG4AQ8WYN0 EXTL2P1-201ENST00000446218 416 ntBASIC5.38□□□□□ -1.55
ATG4AQ8WYN0 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC5.38□□□□□ -1.55
ATG4AQ8WYN0 RSL24D1P3-201ENST00000449255 495 ntBASIC5.38□□□□□ -1.55
ATG4AQ8WYN0 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC5.38□□□□□ -1.55
ATG4AQ8WYN0 USP9YP25-201ENST00000457708 443 ntBASIC5.38□□□□□ -1.55
ATG4AQ8WYN0 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
ATG4AQ8WYN0 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC5.38□□□□□ -1.55
ATG4AQ8WYN0 AC100832.1-201ENST00000471945 383 ntBASIC5.38□□□□□ -1.55
ATG4AQ8WYN0 BET1P1-201ENST00000482276 359 ntBASIC5.38□□□□□ -1.55
ATG4AQ8WYN0 RPS3AP22-201ENST00000488297 769 ntBASIC5.38□□□□□ -1.55
ATG4AQ8WYN0 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.38□□□□□ -1.55
ATG4AQ8WYN0 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
ATG4AQ8WYN0 RNU6-941P-201ENST00000516346 108 ntBASIC5.38□□□□□ -1.55
ATG4AQ8WYN0 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
ATG4AQ8WYN0 AC008126.1-201ENST00000549019 480 ntBASIC5.38□□□□□ -1.55
ATG4AQ8WYN0 LSM3P2-201ENST00000551246 273 ntBASIC5.38□□□□□ -1.55
ATG4AQ8WYN0 MIR4310-201ENST00000582950 57 ntBASIC5.38□□□□□ -1.55
ATG4AQ8WYN0 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC5.38□□□□□ -1.55
ATG4AQ8WYN0 AL109653.1-201ENST00000603091 248 ntBASIC5.38□□□□□ -1.55
ATG4AQ8WYN0 AL022161.1-201ENST00000604390 213 ntBASIC5.38□□□□□ -1.55
ATG4AQ8WYN0 RNA5SP440-201ENST00000612665 119 ntBASIC5.38□□□□□ -1.55
ATG4AQ8WYN0 AC009090.3-201ENST00000616553 565 ntBASIC5.38□□□□□ -1.55
ATG4AQ8WYN0 MIR6861-201ENST00000618657 64 ntBASIC5.38□□□□□ -1.55
ATG4AQ8WYN0 AC118658.2-201ENST00000618697 459 ntBASIC5.38□□□□□ -1.55
ATG4AQ8WYN0 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC5.38□□□□□ -1.55
ATG4AQ8WYN0 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.38□□□□□ -1.55
ATG4AQ8WYN0 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC5.38□□□□□ -1.55
ATG4AQ8WYN0 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
ATG4AQ8WYN0 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
ATG4AQ8WYN0 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC5.38□□□□□ -1.55
ATG4AQ8WYN0 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
ATG4AQ8WYN0 AC116158.1-201ENST00000560231 2129 ntBASIC5.38□□□□□ -1.55
ATG4AQ8WYN0 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.38□□□□□ -1.55
ATG4AQ8WYN0 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.38□□□□□ -1.55
ATG4AQ8WYN0 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
ATG4AQ8WYN0 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
ATG4AQ8WYN0 AC073055.1-201ENST00000456901 1621 ntBASIC5.37□□□□□ -1.55
ATG4AQ8WYN0 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC5.37□□□□□ -1.55
ATG4AQ8WYN0 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
ATG4AQ8WYN0 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
ATG4AQ8WYN0 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
ATG4AQ8WYN0 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
ATG4AQ8WYN0 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms