Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC5.46□□□□□ -1.54
SNED1Q8TER0 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC5.46□□□□□ -1.54
SNED1Q8TER0 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC5.46□□□□□ -1.54
SNED1Q8TER0 AC005520.3-201ENST00000602874 370 ntBASIC5.46□□□□□ -1.54
SNED1Q8TER0 AC023762.1-201ENST00000603280 584 ntBASIC5.46□□□□□ -1.54
SNED1Q8TER0 AL161729.3-201ENST00000603533 673 ntBASIC5.46□□□□□ -1.54
SNED1Q8TER0 AL021368.1-201ENST00000607490 540 ntBASIC5.46□□□□□ -1.54
SNED1Q8TER0 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC5.46□□□□□ -1.54
SNED1Q8TER0 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
SNED1Q8TER0 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SNED1Q8TER0 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SNED1Q8TER0 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
SNED1Q8TER0 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC5.45□□□□□ -1.54
SNED1Q8TER0 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SNED1Q8TER0 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
SNED1Q8TER0 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC5.45□□□□□ -1.54
SNED1Q8TER0 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SNED1Q8TER0 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
SNED1Q8TER0 AL117339.2-201ENST00000430475 180 ntBASIC5.45□□□□□ -1.54
SNED1Q8TER0 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC5.45□□□□□ -1.54
SNED1Q8TER0 AL356276.2-201ENST00000435919 558 ntBASIC5.45□□□□□ -1.54
SNED1Q8TER0 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.45□□□□□ -1.54
SNED1Q8TER0 TPT1P3-201ENST00000492841 512 ntBASIC5.45□□□□□ -1.54
SNED1Q8TER0 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC5.45□□□□□ -1.54
SNED1Q8TER0 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC5.45□□□□□ -1.54
SNED1Q8TER0 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC5.45□□□□□ -1.54
SNED1Q8TER0 NPM1P21-201ENST00000513394 762 ntBASIC5.45□□□□□ -1.54
SNED1Q8TER0 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC5.45□□□□□ -1.54
SNED1Q8TER0 AC087477.6-201ENST00000559595 843 ntBASIC5.45□□□□□ -1.54
SNED1Q8TER0 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC5.45□□□□□ -1.54
SNED1Q8TER0 TMEM30CP-203ENST00000637814 1035 ntBASIC5.45□□□□□ -1.54
SNED1Q8TER0 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SNED1Q8TER0 AL445487.1-201ENST00000415694 1580 ntBASIC5.45□□□□□ -1.54
SNED1Q8TER0 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SNED1Q8TER0 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
SNED1Q8TER0 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SNED1Q8TER0 AC004656.1-201ENST00000568479 4951 ntBASIC5.45□□□□□ -1.54
SNED1Q8TER0 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
SNED1Q8TER0 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC5.44□□□□□ -1.54
SNED1Q8TER0 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC5.44□□□□□ -1.54
SNED1Q8TER0 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SNED1Q8TER0 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SNED1Q8TER0 CASC19-206ENST00000641028 1430 ntBASIC5.44□□□□□ -1.54
SNED1Q8TER0 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SNED1Q8TER0 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SNED1Q8TER0 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SNED1Q8TER0 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC5.44□□□□□ -1.54
SNED1Q8TER0 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
SNED1Q8TER0 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SNED1Q8TER0 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
SNED1Q8TER0 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC5.44□□□□□ -1.54
SNED1Q8TER0 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC5.44□□□□□ -1.54
SNED1Q8TER0 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SNED1Q8TER0 SNORA71.3-201ENST00000362582 128 ntBASIC5.44□□□□□ -1.54
SNED1Q8TER0 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
SNED1Q8TER0 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.44□□□□□ -1.54
SNED1Q8TER0 ZNF736P1Y-201ENST00000440402 1276 ntBASIC5.44□□□□□ -1.54
SNED1Q8TER0 AC104651.2-201ENST00000447549 528 ntBASIC5.44□□□□□ -1.54
SNED1Q8TER0 RPL5P32-201ENST00000454085 879 ntBASIC5.44□□□□□ -1.54
SNED1Q8TER0 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC5.44□□□□□ -1.54
SNED1Q8TER0 ALG13-211ENST00000473389 693 ntTSL 2 BASIC5.44□□□□□ -1.54
SNED1Q8TER0 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC5.44□□□□□ -1.54
SNED1Q8TER0 AC020890.1-201ENST00000491837 504 ntBASIC5.44□□□□□ -1.54
SNED1Q8TER0 AC112184.1-201ENST00000505179 312 ntBASIC5.44□□□□□ -1.54
SNED1Q8TER0 MTCO3P42-201ENST00000509488 518 ntBASIC5.44□□□□□ -1.54
SNED1Q8TER0 MTCO3P39-201ENST00000514812 518 ntBASIC5.44□□□□□ -1.54
SNED1Q8TER0 AC022616.2-201ENST00000523185 300 ntBASIC5.44□□□□□ -1.54
SNED1Q8TER0 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC5.44□□□□□ -1.54
SNED1Q8TER0 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC5.44□□□□□ -1.54
SNED1Q8TER0 HMGN2P47-201ENST00000559378 272 ntBASIC5.44□□□□□ -1.54
SNED1Q8TER0 AC079587.1-201ENST00000603846 277 ntBASIC5.44□□□□□ -1.54
SNED1Q8TER0 AP000720.1-201ENST00000625091 483 ntBASIC5.44□□□□□ -1.54
SNED1Q8TER0 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.44□□□□□ -1.54
SNED1Q8TER0 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC5.44□□□□□ -1.54
SNED1Q8TER0 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC5.44□□□□□ -1.54
SNED1Q8TER0 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SNED1Q8TER0 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SNED1Q8TER0 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC5.43□□□□□ -1.54
SNED1Q8TER0 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SNED1Q8TER0 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SNED1Q8TER0 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC5.43□□□□□ -1.54
SNED1Q8TER0 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
SNED1Q8TER0 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC5.43□□□□□ -1.54
SNED1Q8TER0 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SNED1Q8TER0 CCL7-202ENST00000394627 696 ntTSL 3 BASIC5.43□□□□□ -1.54
SNED1Q8TER0 AC013470.3-201ENST00000420252 1194 ntBASIC5.43□□□□□ -1.54
SNED1Q8TER0 AC114495.1-201ENST00000441274 436 ntBASIC5.43□□□□□ -1.54
SNED1Q8TER0 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5.43□□□□□ -1.54
SNED1Q8TER0 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC5.43□□□□□ -1.54
SNED1Q8TER0 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC5.43□□□□□ -1.54
SNED1Q8TER0 MTND2P31-201ENST00000512602 616 ntBASIC5.43□□□□□ -1.54
SNED1Q8TER0 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC5.43□□□□□ -1.54
SNED1Q8TER0 HNRNPCP4-201ENST00000571636 900 ntBASIC5.43□□□□□ -1.54
SNED1Q8TER0 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC5.43□□□□□ -1.54
SNED1Q8TER0 AL445363.3-201ENST00000623080 671 ntBASIC5.43□□□□□ -1.54
SNED1Q8TER0 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC5.43□□□□□ -1.54
SNED1Q8TER0 AC104260.2-201ENST00000623551 3497 ntBASIC5.43□□□□□ -1.54
SNED1Q8TER0 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.43□□□□□ -1.54
SNED1Q8TER0 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SNED1Q8TER0 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms