Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.46□□□□□ -1.7
CLHC1Q8NHS4 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.46□□□□□ -1.7
CLHC1Q8NHS4 AC021006.3-201ENST00000530771 192 ntBASIC4.46□□□□□ -1.7
CLHC1Q8NHS4 NPM1P35-201ENST00000533043 868 ntBASIC4.46□□□□□ -1.7
CLHC1Q8NHS4 AC068714.1-201ENST00000559623 800 ntBASIC4.46□□□□□ -1.7
CLHC1Q8NHS4 AC112694.2-201ENST00000623697 768 ntBASIC4.46□□□□□ -1.7
CLHC1Q8NHS4 BANCR-201ENST00000624238 473 ntTSL 2 BASIC4.46□□□□□ -1.7
CLHC1Q8NHS4 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC4.46□□□□□ -1.7
CLHC1Q8NHS4 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CLHC1Q8NHS4 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CLHC1Q8NHS4 AC007390.2-201ENST00000606229 3803 ntBASIC4.46□□□□□ -1.7
CLHC1Q8NHS4 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.46□□□□□ -1.7
CLHC1Q8NHS4 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.45□□□□□ -1.7
CLHC1Q8NHS4 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.45□□□□□ -1.7
CLHC1Q8NHS4 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.45□□□□□ -1.7
CLHC1Q8NHS4 AL591848.1-201ENST00000413092 322 ntBASIC4.45□□□□□ -1.7
CLHC1Q8NHS4 TRGV7-201ENST00000427089 353 ntBASIC4.45□□□□□ -1.7
CLHC1Q8NHS4 SUMO2P1-206ENST00000445436 284 ntBASIC4.45□□□□□ -1.7
CLHC1Q8NHS4 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC4.45□□□□□ -1.7
CLHC1Q8NHS4 OR52J1P-201ENST00000450596 932 ntBASIC4.45□□□□□ -1.7
CLHC1Q8NHS4 AC069277.2-201ENST00000454211 432 ntBASIC4.45□□□□□ -1.7
CLHC1Q8NHS4 AC090142.1-201ENST00000465776 462 ntBASIC4.45□□□□□ -1.7
CLHC1Q8NHS4 AC093763.2-201ENST00000505334 1223 ntBASIC4.45□□□□□ -1.7
CLHC1Q8NHS4 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC4.45□□□□□ -1.7
CLHC1Q8NHS4 RNA5SP497-201ENST00000516081 97 ntBASIC4.45□□□□□ -1.7
CLHC1Q8NHS4 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.45□□□□□ -1.7
CLHC1Q8NHS4 AC005000.1-201ENST00000536192 288 ntBASIC4.45□□□□□ -1.7
CLHC1Q8NHS4 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC4.45□□□□□ -1.7
CLHC1Q8NHS4 AP001880.2-201ENST00000538233 448 ntBASIC4.45□□□□□ -1.7
CLHC1Q8NHS4 AC008033.2-201ENST00000542626 177 ntBASIC4.45□□□□□ -1.7
CLHC1Q8NHS4 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.45□□□□□ -1.7
CLHC1Q8NHS4 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC4.45□□□□□ -1.7
CLHC1Q8NHS4 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC4.45□□□□□ -1.7
CLHC1Q8NHS4 AC084757.1-201ENST00000559987 490 ntBASIC4.45□□□□□ -1.7
CLHC1Q8NHS4 SNX6P1-201ENST00000601728 1224 ntBASIC4.45□□□□□ -1.7
CLHC1Q8NHS4 AL158196.1-201ENST00000616786 434 ntBASIC4.45□□□□□ -1.7
CLHC1Q8NHS4 RFC1-217ENST00000639695 867 ntTSL 5 BASIC4.45□□□□□ -1.7
CLHC1Q8NHS4 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.45□□□□□ -1.7
CLHC1Q8NHS4 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CLHC1Q8NHS4 HSPD1P14-201ENST00000432666 1618 ntBASIC4.45□□□□□ -1.7
CLHC1Q8NHS4 INTS6P1-201ENST00000504674 2530 ntBASIC4.45□□□□□ -1.7
CLHC1Q8NHS4 CASC19-284ENST00000642142 1868 ntBASIC4.45□□□□□ -1.7
CLHC1Q8NHS4 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CLHC1Q8NHS4 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
CLHC1Q8NHS4 AC007382.1-201ENST00000624376 2618 ntBASIC4.44□□□□□ -1.7
CLHC1Q8NHS4 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC4.44□□□□□ -1.7
CLHC1Q8NHS4 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CLHC1Q8NHS4 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
CLHC1Q8NHS4 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CLHC1Q8NHS4 OR56B2P-201ENST00000317102 954 ntBASIC4.44□□□□□ -1.7
CLHC1Q8NHS4 RNU1-94P-201ENST00000362627 173 ntBASIC4.44□□□□□ -1.7
CLHC1Q8NHS4 RNU6-697P-201ENST00000363348 107 ntBASIC4.44□□□□□ -1.7
CLHC1Q8NHS4 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.44□□□□□ -1.7
CLHC1Q8NHS4 MIR195-201ENST00000385194 87 ntBASIC4.44□□□□□ -1.7
CLHC1Q8NHS4 MIR1178-201ENST00000408396 91 ntBASIC4.44□□□□□ -1.7
CLHC1Q8NHS4 RSU1P3-201ENST00000412878 835 ntBASIC4.44□□□□□ -1.7
CLHC1Q8NHS4 AC004074.1-201ENST00000421810 1063 ntBASIC4.44□□□□□ -1.7
CLHC1Q8NHS4 RPL21P43-201ENST00000425440 472 ntBASIC4.44□□□□□ -1.7
CLHC1Q8NHS4 DPY19L1P2-201ENST00000426647 915 ntBASIC4.44□□□□□ -1.7
CLHC1Q8NHS4 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.44□□□□□ -1.7
CLHC1Q8NHS4 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.44□□□□□ -1.7
CLHC1Q8NHS4 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.44□□□□□ -1.7
CLHC1Q8NHS4 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.44□□□□□ -1.7
CLHC1Q8NHS4 EIF2S2P5-201ENST00000457635 968 ntBASIC4.44□□□□□ -1.7
CLHC1Q8NHS4 RPL7AP28-201ENST00000464513 571 ntBASIC4.44□□□□□ -1.7
CLHC1Q8NHS4 RPL7AP6-201ENST00000477943 801 ntBASIC4.44□□□□□ -1.7
CLHC1Q8NHS4 METTL15P1-201ENST00000481421 1045 ntBASIC4.44□□□□□ -1.7
CLHC1Q8NHS4 PRELID3BP7-201ENST00000503606 469 ntBASIC4.44□□□□□ -1.7
CLHC1Q8NHS4 TRIM36-IT1-201ENST00000503723 881 ntBASIC4.44□□□□□ -1.7
CLHC1Q8NHS4 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC4.44□□□□□ -1.7
CLHC1Q8NHS4 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC4.44□□□□□ -1.7
CLHC1Q8NHS4 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.44□□□□□ -1.7
CLHC1Q8NHS4 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC4.44□□□□□ -1.7
CLHC1Q8NHS4 HMGN2P6-201ENST00000551091 273 ntBASIC4.44□□□□□ -1.7
CLHC1Q8NHS4 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.44□□□□□ -1.7
CLHC1Q8NHS4 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.44□□□□□ -1.7
CLHC1Q8NHS4 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.44□□□□□ -1.7
CLHC1Q8NHS4 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC4.44□□□□□ -1.7
CLHC1Q8NHS4 RN7SL176P-201ENST00000580352 264 ntBASIC4.44□□□□□ -1.7
CLHC1Q8NHS4 uc_338.18-201ENST00000615451 175 ntBASIC4.44□□□□□ -1.7
CLHC1Q8NHS4 AC009237.17-201ENST00000618111 748 ntBASIC4.44□□□□□ -1.7
CLHC1Q8NHS4 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC4.44□□□□□ -1.7
CLHC1Q8NHS4 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC4.44□□□□□ -1.7
CLHC1Q8NHS4 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
CLHC1Q8NHS4 RARSP1-201ENST00000542842 1418 ntBASIC4.44□□□□□ -1.7
CLHC1Q8NHS4 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CLHC1Q8NHS4 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.44□□□□□ -1.7
CLHC1Q8NHS4 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.44□□□□□ -1.7
CLHC1Q8NHS4 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.44□□□□□ -1.7
CLHC1Q8NHS4 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CLHC1Q8NHS4 CIR1P2-201ENST00000514821 1342 ntBASIC4.44□□□□□ -1.7
CLHC1Q8NHS4 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.43□□□□□ -1.7
CLHC1Q8NHS4 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.43□□□□□ -1.7
CLHC1Q8NHS4 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
CLHC1Q8NHS4 AL391684.1-202ENST00000641293 1636 ntBASIC4.43□□□□□ -1.7
CLHC1Q8NHS4 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CLHC1Q8NHS4 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CLHC1Q8NHS4 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
CLHC1Q8NHS4 AL356489.2-201ENST00000566968 3528 ntBASIC4.43□□□□□ -1.7
CLHC1Q8NHS4 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms