Protein–RNA interactions for Protein: Q8NEV1

CSNK2A3, Casein kinase II subunit alpha 3, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2A3Q8NEV1 AC010245.2-201ENST00000606908 1167 ntBASIC4.61□□□□□ -1.67
CSNK2A3Q8NEV1 AC024060.1-201ENST00000607052 494 ntBASIC4.61□□□□□ -1.67
CSNK2A3Q8NEV1 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CSNK2A3Q8NEV1 HOTTIP_3.1-201ENST00000619957 337 ntBASIC4.61□□□□□ -1.67
CSNK2A3Q8NEV1 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC4.61□□□□□ -1.67
CSNK2A3Q8NEV1 AC006963.1-201ENST00000624003 1052 ntBASIC4.61□□□□□ -1.67
CSNK2A3Q8NEV1 AP001962.1-201ENST00000624114 559 ntBASIC4.61□□□□□ -1.67
CSNK2A3Q8NEV1 AL121594.5-201ENST00000631724 573 ntBASIC4.61□□□□□ -1.67
CSNK2A3Q8NEV1 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC4.61□□□□□ -1.67
CSNK2A3Q8NEV1 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
CSNK2A3Q8NEV1 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CSNK2A3Q8NEV1 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC4.61□□□□□ -1.67
CSNK2A3Q8NEV1 AC011755.1-201ENST00000623763 2049 ntBASIC4.61□□□□□ -1.67
CSNK2A3Q8NEV1 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC4.61□□□□□ -1.67
CSNK2A3Q8NEV1 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CSNK2A3Q8NEV1 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CSNK2A3Q8NEV1 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
CSNK2A3Q8NEV1 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CSNK2A3Q8NEV1 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC4.61□□□□□ -1.67
CSNK2A3Q8NEV1 NEAT1-202ENST00000501122 22743 ntBASIC4.61□□□□□ -1.67
CSNK2A3Q8NEV1 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CSNK2A3Q8NEV1 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CSNK2A3Q8NEV1 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
CSNK2A3Q8NEV1 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC4.6□□□□□ -1.67
CSNK2A3Q8NEV1 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
CSNK2A3Q8NEV1 RMST-202ENST00000541282 2099 ntTSL 2 BASIC4.6□□□□□ -1.67
CSNK2A3Q8NEV1 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CSNK2A3Q8NEV1 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
CSNK2A3Q8NEV1 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
CSNK2A3Q8NEV1 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC4.6□□□□□ -1.67
CSNK2A3Q8NEV1 RNU6-353P-201ENST00000364266 108 ntBASIC4.6□□□□□ -1.67
CSNK2A3Q8NEV1 RN7SKP124-201ENST00000364730 341 ntBASIC4.6□□□□□ -1.67
CSNK2A3Q8NEV1 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC4.6□□□□□ -1.67
CSNK2A3Q8NEV1 AP002530.1-201ENST00000405705 684 ntBASIC4.6□□□□□ -1.67
CSNK2A3Q8NEV1 NCSTNP1-201ENST00000406229 144 ntBASIC4.6□□□□□ -1.67
CSNK2A3Q8NEV1 BTF3P8-201ENST00000414577 526 ntBASIC4.6□□□□□ -1.67
CSNK2A3Q8NEV1 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC4.6□□□□□ -1.67
CSNK2A3Q8NEV1 MTND4P3-201ENST00000417829 541 ntBASIC4.6□□□□□ -1.67
CSNK2A3Q8NEV1 SLC9B1P4-201ENST00000421957 1288 ntBASIC4.6□□□□□ -1.67
CSNK2A3Q8NEV1 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CSNK2A3Q8NEV1 AC092648.1-201ENST00000425870 423 ntBASIC4.6□□□□□ -1.67
CSNK2A3Q8NEV1 AC092634.2-201ENST00000428146 1010 ntBASIC4.6□□□□□ -1.67
CSNK2A3Q8NEV1 AC002069.1-201ENST00000429649 1159 ntBASIC4.6□□□□□ -1.67
CSNK2A3Q8NEV1 CDY14P-201ENST00000431260 1014 ntBASIC4.6□□□□□ -1.67
CSNK2A3Q8NEV1 RPS29P14-201ENST00000431518 171 ntBASIC4.6□□□□□ -1.67
CSNK2A3Q8NEV1 MTND6P18-201ENST00000439477 513 ntBASIC4.6□□□□□ -1.67
CSNK2A3Q8NEV1 CDY12P-201ENST00000440679 1015 ntBASIC4.6□□□□□ -1.67
CSNK2A3Q8NEV1 CDY13P-201ENST00000445813 1015 ntBASIC4.6□□□□□ -1.67
CSNK2A3Q8NEV1 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CSNK2A3Q8NEV1 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
CSNK2A3Q8NEV1 MRPL35P2-201ENST00000448009 511 ntBASIC4.6□□□□□ -1.67
CSNK2A3Q8NEV1 CDY23P-201ENST00000451661 1014 ntBASIC4.6□□□□□ -1.67
CSNK2A3Q8NEV1 PRPF38AP1-201ENST00000451976 933 ntBASIC4.6□□□□□ -1.67
CSNK2A3Q8NEV1 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC4.6□□□□□ -1.67
CSNK2A3Q8NEV1 RANP1-206ENST00000455094 651 ntBASIC4.6□□□□□ -1.67
CSNK2A3Q8NEV1 AC100832.1-201ENST00000471945 383 ntBASIC4.6□□□□□ -1.67
CSNK2A3Q8NEV1 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC4.6□□□□□ -1.67
CSNK2A3Q8NEV1 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC4.6□□□□□ -1.67
CSNK2A3Q8NEV1 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC4.6□□□□□ -1.67
CSNK2A3Q8NEV1 AC119751.1-201ENST00000513357 765 ntBASIC4.6□□□□□ -1.67
CSNK2A3Q8NEV1 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC4.6□□□□□ -1.67
CSNK2A3Q8NEV1 PRELID3BP4-201ENST00000515476 571 ntBASIC4.6□□□□□ -1.67
CSNK2A3Q8NEV1 Y_RNA.717-201ENST00000517106 92 ntBASIC4.6□□□□□ -1.67
CSNK2A3Q8NEV1 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC4.6□□□□□ -1.67
CSNK2A3Q8NEV1 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC4.6□□□□□ -1.67
CSNK2A3Q8NEV1 HMGB1P40-201ENST00000525121 540 ntBASIC4.6□□□□□ -1.67
CSNK2A3Q8NEV1 LRRC6P1-201ENST00000532188 885 ntBASIC4.6□□□□□ -1.67
CSNK2A3Q8NEV1 AP004607.2-201ENST00000533949 322 ntBASIC4.6□□□□□ -1.67
CSNK2A3Q8NEV1 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC4.6□□□□□ -1.67
CSNK2A3Q8NEV1 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CSNK2A3Q8NEV1 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC4.6□□□□□ -1.67
CSNK2A3Q8NEV1 SETP1-201ENST00000556014 845 ntBASIC4.6□□□□□ -1.67
CSNK2A3Q8NEV1 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC4.6□□□□□ -1.67
CSNK2A3Q8NEV1 PDCD6IPP2-207ENST00000566321 1069 ntBASIC4.6□□□□□ -1.67
CSNK2A3Q8NEV1 RBM22P1-201ENST00000578589 1214 ntBASIC4.6□□□□□ -1.67
CSNK2A3Q8NEV1 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC4.6□□□□□ -1.67
CSNK2A3Q8NEV1 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC4.6□□□□□ -1.67
CSNK2A3Q8NEV1 AC098935.2-201ENST00000604222 466 ntBASIC4.6□□□□□ -1.67
CSNK2A3Q8NEV1 AC009597.2-201ENST00000604659 592 ntBASIC4.6□□□□□ -1.67
CSNK2A3Q8NEV1 AC015982.1-201ENST00000608113 465 ntBASIC4.6□□□□□ -1.67
CSNK2A3Q8NEV1 AC000068.2-201ENST00000608816 460 ntBASIC4.6□□□□□ -1.67
CSNK2A3Q8NEV1 RNA5SP440-201ENST00000612665 119 ntBASIC4.6□□□□□ -1.67
CSNK2A3Q8NEV1 MIR7973-1-201ENST00000614683 76 ntBASIC4.6□□□□□ -1.67
CSNK2A3Q8NEV1 AC140725.3-201ENST00000616193 880 ntBASIC4.6□□□□□ -1.67
CSNK2A3Q8NEV1 AC126175.1-201ENST00000617041 758 ntBASIC4.6□□□□□ -1.67
CSNK2A3Q8NEV1 MIR8080-201ENST00000622224 89 ntBASIC4.6□□□□□ -1.67
CSNK2A3Q8NEV1 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC4.6□□□□□ -1.67
CSNK2A3Q8NEV1 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC4.6□□□□□ -1.67
CSNK2A3Q8NEV1 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
CSNK2A3Q8NEV1 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
CSNK2A3Q8NEV1 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
CSNK2A3Q8NEV1 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CSNK2A3Q8NEV1 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CSNK2A3Q8NEV1 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CSNK2A3Q8NEV1 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CSNK2A3Q8NEV1 RNF6P1-201ENST00000444889 1784 ntBASIC4.6□□□□□ -1.67
CSNK2A3Q8NEV1 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
CSNK2A3Q8NEV1 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.6□□□□□ -1.67
CSNK2A3Q8NEV1 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
CSNK2A3Q8NEV1 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 188.4 ms