Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 LINC02019-201ENST00000608605 2060 ntBASIC5.68□□□□□ -1.5
HIPK4Q8NE63 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
HIPK4Q8NE63 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.68□□□□□ -1.5
HIPK4Q8NE63 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
HIPK4Q8NE63 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
HIPK4Q8NE63 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC5.68□□□□□ -1.5
HIPK4Q8NE63 RN7SKP185-201ENST00000362813 326 ntBASIC5.68□□□□□ -1.5
HIPK4Q8NE63 RNU5D-1-201ENST00000363299 116 ntBASIC5.68□□□□□ -1.5
HIPK4Q8NE63 RNU6-839P-201ENST00000363347 108 ntBASIC5.68□□□□□ -1.5
HIPK4Q8NE63 SNORA4.1-201ENST00000364263 144 ntBASIC5.68□□□□□ -1.5
HIPK4Q8NE63 Y_RNA.359-201ENST00000365498 102 ntBASIC5.68□□□□□ -1.5
HIPK4Q8NE63 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC5.68□□□□□ -1.5
HIPK4Q8NE63 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC5.68□□□□□ -1.5
HIPK4Q8NE63 RNU6-1320P-201ENST00000390838 107 ntBASIC5.68□□□□□ -1.5
HIPK4Q8NE63 RNU6-1269P-201ENST00000391139 107 ntBASIC5.68□□□□□ -1.5
HIPK4Q8NE63 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
HIPK4Q8NE63 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HIPK4Q8NE63 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC5.68□□□□□ -1.5
HIPK4Q8NE63 AC022028.1-201ENST00000412054 408 ntBASIC5.68□□□□□ -1.5
HIPK4Q8NE63 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.68□□□□□ -1.5
HIPK4Q8NE63 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC5.68□□□□□ -1.5
HIPK4Q8NE63 MTCYBP5-201ENST00000423752 1135 ntBASIC5.68□□□□□ -1.5
HIPK4Q8NE63 CCNB1IP1P1-201ENST00000428976 839 ntBASIC5.68□□□□□ -1.5
HIPK4Q8NE63 ARL6IP1P2-201ENST00000431356 563 ntBASIC5.68□□□□□ -1.5
HIPK4Q8NE63 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
HIPK4Q8NE63 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC5.68□□□□□ -1.5
HIPK4Q8NE63 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC5.68□□□□□ -1.5
HIPK4Q8NE63 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC5.68□□□□□ -1.5
HIPK4Q8NE63 CRYZL1-217ENST00000445393 824 ntTSL 5 BASIC5.68□□□□□ -1.5
HIPK4Q8NE63 MTND1P1-201ENST00000445453 368 ntBASIC5.68□□□□□ -1.5
HIPK4Q8NE63 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
HIPK4Q8NE63 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC5.68□□□□□ -1.5
HIPK4Q8NE63 AL445991.1-201ENST00000450381 475 ntBASIC5.68□□□□□ -1.5
HIPK4Q8NE63 RPL5P32-201ENST00000454085 879 ntBASIC5.68□□□□□ -1.5
HIPK4Q8NE63 SEPT7P3-201ENST00000455017 621 ntBASIC5.68□□□□□ -1.5
HIPK4Q8NE63 AC093899.1-201ENST00000457984 376 ntBASIC5.68□□□□□ -1.5
HIPK4Q8NE63 RNU7-27P-201ENST00000459281 62 ntBASIC5.68□□□□□ -1.5
HIPK4Q8NE63 RNU6-599P-201ENST00000459383 107 ntBASIC5.68□□□□□ -1.5
HIPK4Q8NE63 RNU6-1193P-201ENST00000459461 107 ntBASIC5.68□□□□□ -1.5
HIPK4Q8NE63 AC090602.1-201ENST00000469695 252 ntBASIC5.68□□□□□ -1.5
HIPK4Q8NE63 AC015524.1-201ENST00000491585 472 ntBASIC5.68□□□□□ -1.5
HIPK4Q8NE63 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HIPK4Q8NE63 AC104685.1-201ENST00000502445 371 ntBASIC5.68□□□□□ -1.5
HIPK4Q8NE63 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HIPK4Q8NE63 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC5.68□□□□□ -1.5
HIPK4Q8NE63 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC5.68□□□□□ -1.5
HIPK4Q8NE63 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC5.68□□□□□ -1.5
HIPK4Q8NE63 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HIPK4Q8NE63 AC098799.3-201ENST00000506095 438 ntBASIC5.68□□□□□ -1.5
HIPK4Q8NE63 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC5.68□□□□□ -1.5
HIPK4Q8NE63 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC5.68□□□□□ -1.5
HIPK4Q8NE63 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HIPK4Q8NE63 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC5.68□□□□□ -1.5
HIPK4Q8NE63 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC5.68□□□□□ -1.5
HIPK4Q8NE63 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC5.68□□□□□ -1.5
HIPK4Q8NE63 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HIPK4Q8NE63 GTF2IP8-201ENST00000560687 584 ntBASIC5.68□□□□□ -1.5
HIPK4Q8NE63 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5.68□□□□□ -1.5
HIPK4Q8NE63 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC5.68□□□□□ -1.5
HIPK4Q8NE63 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC5.68□□□□□ -1.5
HIPK4Q8NE63 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC5.68□□□□□ -1.5
HIPK4Q8NE63 AC087683.1-201ENST00000591187 441 ntBASIC5.68□□□□□ -1.5
HIPK4Q8NE63 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.68□□□□□ -1.5
HIPK4Q8NE63 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.68□□□□□ -1.5
HIPK4Q8NE63 AL390838.2-201ENST00000602394 274 ntBASIC5.68□□□□□ -1.5
HIPK4Q8NE63 AL513327.3-201ENST00000602618 469 ntBASIC5.68□□□□□ -1.5
HIPK4Q8NE63 AC133552.5-201ENST00000604266 540 ntBASIC5.68□□□□□ -1.5
HIPK4Q8NE63 AL451049.1-201ENST00000608672 497 ntBASIC5.68□□□□□ -1.5
HIPK4Q8NE63 AL121873.1-201ENST00000616013 524 ntBASIC5.68□□□□□ -1.5
HIPK4Q8NE63 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC5.68□□□□□ -1.5
HIPK4Q8NE63 RNU6-368P-201ENST00000620928 107 ntBASIC5.68□□□□□ -1.5
HIPK4Q8NE63 RNU6-538P-201ENST00000622329 107 ntBASIC5.68□□□□□ -1.5
HIPK4Q8NE63 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HIPK4Q8NE63 OXSM-209ENST00000626005 309 ntTSL 3 BASIC5.68□□□□□ -1.5
HIPK4Q8NE63 THAP12P9-201ENST00000503971 2360 ntBASIC5.68□□□□□ -1.5
HIPK4Q8NE63 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HIPK4Q8NE63 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HIPK4Q8NE63 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.68□□□□□ -1.5
HIPK4Q8NE63 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC5.68□□□□□ -1.5
HIPK4Q8NE63 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HIPK4Q8NE63 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
HIPK4Q8NE63 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
HIPK4Q8NE63 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
HIPK4Q8NE63 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
HIPK4Q8NE63 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC5.67□□□□□ -1.5
HIPK4Q8NE63 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
HIPK4Q8NE63 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.67□□□□□ -1.5
HIPK4Q8NE63 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
HIPK4Q8NE63 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.67□□□□□ -1.5
HIPK4Q8NE63 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
HIPK4Q8NE63 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HIPK4Q8NE63 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
HIPK4Q8NE63 AL121657.1-201ENST00000327215 531 ntBASIC5.67□□□□□ -1.5
HIPK4Q8NE63 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.67□□□□□ -1.5
HIPK4Q8NE63 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HIPK4Q8NE63 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
HIPK4Q8NE63 RNA5SP279-201ENST00000365513 117 ntBASIC5.67□□□□□ -1.5
HIPK4Q8NE63 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.67□□□□□ -1.5
HIPK4Q8NE63 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.67□□□□□ -1.5
HIPK4Q8NE63 SNORA70.6-201ENST00000383934 134 ntBASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms