Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
SMC1BQ8NDV3 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC6.43□□□□□ -1.38
SMC1BQ8NDV3 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC6.43□□□□□ -1.38
SMC1BQ8NDV3 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC6.43□□□□□ -1.38
SMC1BQ8NDV3 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC6.43□□□□□ -1.38
SMC1BQ8NDV3 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
SMC1BQ8NDV3 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
SMC1BQ8NDV3 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
SMC1BQ8NDV3 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC6.43□□□□□ -1.38
SMC1BQ8NDV3 AC005725.1-201ENST00000577346 2607 ntBASIC6.43□□□□□ -1.38
SMC1BQ8NDV3 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC6.43□□□□□ -1.38
SMC1BQ8NDV3 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
SMC1BQ8NDV3 RNA5SP27-201ENST00000363839 119 ntBASIC6.43□□□□□ -1.38
SMC1BQ8NDV3 RNA5SP455-201ENST00000365190 119 ntBASIC6.43□□□□□ -1.38
SMC1BQ8NDV3 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC6.43□□□□□ -1.38
SMC1BQ8NDV3 RNU6-1263P-201ENST00000384601 106 ntBASIC6.43□□□□□ -1.38
SMC1BQ8NDV3 OR4K12P-201ENST00000406538 961 ntBASIC6.43□□□□□ -1.38
SMC1BQ8NDV3 ATP6V1G1P7-201ENST00000415853 349 ntBASIC6.43□□□□□ -1.38
SMC1BQ8NDV3 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC6.43□□□□□ -1.38
SMC1BQ8NDV3 AC069213.2-201ENST00000420238 366 ntBASIC6.43□□□□□ -1.38
SMC1BQ8NDV3 AL513175.2-201ENST00000422071 443 ntBASIC6.43□□□□□ -1.38
SMC1BQ8NDV3 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC6.43□□□□□ -1.38
SMC1BQ8NDV3 AC096775.1-201ENST00000437724 448 ntBASIC6.43□□□□□ -1.38
SMC1BQ8NDV3 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC6.43□□□□□ -1.38
SMC1BQ8NDV3 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC6.43□□□□□ -1.38
SMC1BQ8NDV3 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC6.43□□□□□ -1.38
SMC1BQ8NDV3 OR6K5P-201ENST00000447050 945 ntBASIC6.43□□□□□ -1.38
SMC1BQ8NDV3 AL589880.1-201ENST00000448271 287 ntBASIC6.43□□□□□ -1.38
SMC1BQ8NDV3 VN1R40P-201ENST00000455196 941 ntBASIC6.43□□□□□ -1.38
SMC1BQ8NDV3 HNRNPDLP3-201ENST00000456745 380 ntBASIC6.43□□□□□ -1.38
SMC1BQ8NDV3 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC6.43□□□□□ -1.38
SMC1BQ8NDV3 SLC25A51P1-201ENST00000468432 871 ntBASIC6.43□□□□□ -1.38
SMC1BQ8NDV3 AC022034.3-201ENST00000471393 478 ntBASIC6.43□□□□□ -1.38
SMC1BQ8NDV3 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC6.43□□□□□ -1.38
SMC1BQ8NDV3 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
SMC1BQ8NDV3 AC090058.1-201ENST00000498788 435 ntBASIC6.43□□□□□ -1.38
SMC1BQ8NDV3 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC6.43□□□□□ -1.38
SMC1BQ8NDV3 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC6.43□□□□□ -1.38
SMC1BQ8NDV3 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC6.43□□□□□ -1.38
SMC1BQ8NDV3 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
SMC1BQ8NDV3 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC6.43□□□□□ -1.38
SMC1BQ8NDV3 AC005341.1-201ENST00000571086 708 ntBASIC6.43□□□□□ -1.38
SMC1BQ8NDV3 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC6.43□□□□□ -1.38
SMC1BQ8NDV3 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC6.43□□□□□ -1.38
SMC1BQ8NDV3 AL513327.3-201ENST00000602618 469 ntBASIC6.43□□□□□ -1.38
SMC1BQ8NDV3 AC021171.1-201ENST00000603137 706 ntBASIC6.43□□□□□ -1.38
SMC1BQ8NDV3 AL035411.2-201ENST00000604022 421 ntBASIC6.43□□□□□ -1.38
SMC1BQ8NDV3 AC093783.1-201ENST00000612976 329 ntBASIC6.43□□□□□ -1.38
SMC1BQ8NDV3 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC6.43□□□□□ -1.38
SMC1BQ8NDV3 AL161637.1-201ENST00000622380 412 ntBASIC6.43□□□□□ -1.38
SMC1BQ8NDV3 AC015660.5-201ENST00000623238 564 ntBASIC6.43□□□□□ -1.38
SMC1BQ8NDV3 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC6.43□□□□□ -1.38
SMC1BQ8NDV3 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC6.43□□□□□ -1.38
SMC1BQ8NDV3 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
SMC1BQ8NDV3 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC6.43□□□□□ -1.38
SMC1BQ8NDV3 MT-RNR2-201ENST00000387347 1559 ntBASIC6.43□□□□□ -1.38
SMC1BQ8NDV3 AC020656.2-201ENST00000613291 5309 ntBASIC6.43□□□□□ -1.38
SMC1BQ8NDV3 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC6.43□□□□□ -1.38
SMC1BQ8NDV3 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC6.43□□□□□ -1.38
SMC1BQ8NDV3 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC6.43□□□□□ -1.38
SMC1BQ8NDV3 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
SMC1BQ8NDV3 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
SMC1BQ8NDV3 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
SMC1BQ8NDV3 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
SMC1BQ8NDV3 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC6.42□□□□□ -1.38
SMC1BQ8NDV3 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
SMC1BQ8NDV3 SNORA57.1-201ENST00000391227 145 ntBASIC6.42□□□□□ -1.38
SMC1BQ8NDV3 AL136310.1-201ENST00000404926 654 ntBASIC6.42□□□□□ -1.38
SMC1BQ8NDV3 HMGB3P31-201ENST00000413333 595 ntBASIC6.42□□□□□ -1.38
SMC1BQ8NDV3 AC007562.1-201ENST00000421819 517 ntBASIC6.42□□□□□ -1.38
SMC1BQ8NDV3 DDX39BP1-205ENST00000422507 192 ntBASIC6.42□□□□□ -1.38
SMC1BQ8NDV3 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC6.42□□□□□ -1.38
SMC1BQ8NDV3 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC6.42□□□□□ -1.38
SMC1BQ8NDV3 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC6.42□□□□□ -1.38
SMC1BQ8NDV3 SETD6P1-201ENST00000444575 317 ntBASIC6.42□□□□□ -1.38
SMC1BQ8NDV3 AC023274.2-201ENST00000445264 521 ntBASIC6.42□□□□□ -1.38
SMC1BQ8NDV3 RPL34P26-201ENST00000445636 354 ntBASIC6.42□□□□□ -1.38
SMC1BQ8NDV3 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC6.42□□□□□ -1.38
SMC1BQ8NDV3 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC6.42□□□□□ -1.38
SMC1BQ8NDV3 PPIAP21-201ENST00000464473 501 ntBASIC6.42□□□□□ -1.38
SMC1BQ8NDV3 AC063943.1-201ENST00000465434 453 ntBASIC6.42□□□□□ -1.38
SMC1BQ8NDV3 AP000563.1-201ENST00000490865 758 ntBASIC6.42□□□□□ -1.38
SMC1BQ8NDV3 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC6.42□□□□□ -1.38
SMC1BQ8NDV3 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC6.42□□□□□ -1.38
SMC1BQ8NDV3 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC6.42□□□□□ -1.38
SMC1BQ8NDV3 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC6.42□□□□□ -1.38
SMC1BQ8NDV3 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC6.42□□□□□ -1.38
SMC1BQ8NDV3 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC6.42□□□□□ -1.38
SMC1BQ8NDV3 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC6.42□□□□□ -1.38
SMC1BQ8NDV3 AC023050.2-201ENST00000544968 387 ntBASIC6.42□□□□□ -1.38
SMC1BQ8NDV3 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
SMC1BQ8NDV3 MIR4691-201ENST00000583764 85 ntBASIC6.42□□□□□ -1.38
SMC1BQ8NDV3 AC011453.2-201ENST00000603737 729 ntBASIC6.42□□□□□ -1.38
SMC1BQ8NDV3 AC010857.1-201ENST00000606398 594 ntBASIC6.42□□□□□ -1.38
SMC1BQ8NDV3 AC096586.1-201ENST00000610267 561 ntBASIC6.42□□□□□ -1.38
SMC1BQ8NDV3 AC010975.3-201ENST00000618727 978 ntBASIC6.42□□□□□ -1.38
SMC1BQ8NDV3 AC241377.1-201ENST00000619797 406 ntBASIC6.42□□□□□ -1.38
SMC1BQ8NDV3 AC011815.3-201ENST00000624194 473 ntBASIC6.42□□□□□ -1.38
SMC1BQ8NDV3 UGP2-231ENST00000627474 264 ntTSL 5 BASIC6.42□□□□□ -1.38
SMC1BQ8NDV3 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 272.3 ms