Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
VPS8Q8N3P4 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
VPS8Q8N3P4 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
VPS8Q8N3P4 RNA5SP317-201ENST00000410176 116 ntBASIC6.73□□□□□ -1.33
VPS8Q8N3P4 RNA5SP311-201ENST00000411290 116 ntBASIC6.73□□□□□ -1.33
VPS8Q8N3P4 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC6.73□□□□□ -1.33
VPS8Q8N3P4 AC012519.1-201ENST00000424588 610 ntBASIC6.73□□□□□ -1.33
VPS8Q8N3P4 SKP1P3-201ENST00000429280 487 ntBASIC6.73□□□□□ -1.33
VPS8Q8N3P4 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC6.73□□□□□ -1.33
VPS8Q8N3P4 RPS20P4-201ENST00000461659 355 ntBASIC6.73□□□□□ -1.33
VPS8Q8N3P4 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
VPS8Q8N3P4 AL161747.1-201ENST00000480068 358 ntBASIC6.73□□□□□ -1.33
VPS8Q8N3P4 AC068587.1-201ENST00000483613 781 ntBASIC6.73□□□□□ -1.33
VPS8Q8N3P4 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC6.73□□□□□ -1.33
VPS8Q8N3P4 RNU6-513P-201ENST00000516104 104 ntBASIC6.73□□□□□ -1.33
VPS8Q8N3P4 RNA5SP315-201ENST00000516340 116 ntBASIC6.73□□□□□ -1.33
VPS8Q8N3P4 RNA5SP312-201ENST00000517068 116 ntBASIC6.73□□□□□ -1.33
VPS8Q8N3P4 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
VPS8Q8N3P4 AC025884.1-201ENST00000556034 378 ntBASIC6.73□□□□□ -1.33
VPS8Q8N3P4 RN7SL176P-201ENST00000580352 264 ntBASIC6.73□□□□□ -1.33
VPS8Q8N3P4 AC008759.1-201ENST00000589783 983 ntBASIC6.73□□□□□ -1.33
VPS8Q8N3P4 SLC25A36P1-201ENST00000590111 465 ntBASIC6.73□□□□□ -1.33
VPS8Q8N3P4 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
VPS8Q8N3P4 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
VPS8Q8N3P4 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
VPS8Q8N3P4 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC6.73□□□□□ -1.33
VPS8Q8N3P4 AL133243.3-201ENST00000617415 3004 ntBASIC6.72□□□□□ -1.33
VPS8Q8N3P4 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
VPS8Q8N3P4 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC6.72□□□□□ -1.33
VPS8Q8N3P4 RNA5SP28-201ENST00000363841 119 ntBASIC6.72□□□□□ -1.33
VPS8Q8N3P4 HYKK-202ENST00000408962 847 ntTSL 5 BASIC6.72□□□□□ -1.33
VPS8Q8N3P4 RPL31-204ENST00000409038 817 ntTSL 2 BASIC6.72□□□□□ -1.33
VPS8Q8N3P4 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC6.72□□□□□ -1.33
VPS8Q8N3P4 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC6.72□□□□□ -1.33
VPS8Q8N3P4 AC105137.1-201ENST00000484355 562 ntBASIC6.72□□□□□ -1.33
VPS8Q8N3P4 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC6.72□□□□□ -1.33
VPS8Q8N3P4 AC099522.1-202ENST00000514718 367 ntBASIC6.72□□□□□ -1.33
VPS8Q8N3P4 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC6.72□□□□□ -1.33
VPS8Q8N3P4 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC6.72□□□□□ -1.33
VPS8Q8N3P4 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC6.72□□□□□ -1.33
VPS8Q8N3P4 HYKK-203ENST00000563233 734 ntTSL 2 BASIC6.72□□□□□ -1.33
VPS8Q8N3P4 MIR3160-1-201ENST00000577972 85 ntBASIC6.72□□□□□ -1.33
VPS8Q8N3P4 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
VPS8Q8N3P4 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC6.72□□□□□ -1.33
VPS8Q8N3P4 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
VPS8Q8N3P4 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
VPS8Q8N3P4 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC6.71□□□□□ -1.33
VPS8Q8N3P4 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.33
VPS8Q8N3P4 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC6.71□□□□□ -1.34
VPS8Q8N3P4 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
VPS8Q8N3P4 RNA5SP479-201ENST00000364858 117 ntBASIC6.71□□□□□ -1.34
VPS8Q8N3P4 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC6.71□□□□□ -1.34
VPS8Q8N3P4 SNORD66.1-201ENST00000391230 76 ntBASIC6.71□□□□□ -1.34
VPS8Q8N3P4 ARL4AP3-201ENST00000441452 574 ntBASIC6.71□□□□□ -1.34
VPS8Q8N3P4 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC6.71□□□□□ -1.34
VPS8Q8N3P4 RPL23AP81-201ENST00000455252 467 ntBASIC6.71□□□□□ -1.34
VPS8Q8N3P4 SETP4-201ENST00000455717 868 ntBASIC6.71□□□□□ -1.34
VPS8Q8N3P4 RPL7P22-201ENST00000466005 733 ntBASIC6.71□□□□□ -1.34
VPS8Q8N3P4 AC100770.1-201ENST00000532310 322 ntBASIC6.71□□□□□ -1.34
VPS8Q8N3P4 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC6.71□□□□□ -1.34
VPS8Q8N3P4 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC6.71□□□□□ -1.34
VPS8Q8N3P4 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC6.71□□□□□ -1.34
VPS8Q8N3P4 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC6.71□□□□□ -1.34
VPS8Q8N3P4 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC6.71□□□□□ -1.34
VPS8Q8N3P4 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC6.71□□□□□ -1.34
VPS8Q8N3P4 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC6.71□□□□□ -1.34
VPS8Q8N3P4 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
VPS8Q8N3P4 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC6.71□□□□□ -1.34
VPS8Q8N3P4 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
VPS8Q8N3P4 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC6.7□□□□□ -1.34
VPS8Q8N3P4 AP000641.1-201ENST00000531988 1639 ntBASIC6.7□□□□□ -1.34
VPS8Q8N3P4 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
VPS8Q8N3P4 AC005261.4-201ENST00000600047 1385 ntBASIC6.7□□□□□ -1.34
VPS8Q8N3P4 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
VPS8Q8N3P4 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC6.7□□□□□ -1.34
VPS8Q8N3P4 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
VPS8Q8N3P4 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC6.7□□□□□ -1.34
VPS8Q8N3P4 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC6.7□□□□□ -1.34
VPS8Q8N3P4 AL022722.2-201ENST00000402519 180 ntBASIC6.7□□□□□ -1.34
VPS8Q8N3P4 SEPT7P8-201ENST00000413308 775 ntBASIC6.7□□□□□ -1.34
VPS8Q8N3P4 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
VPS8Q8N3P4 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
VPS8Q8N3P4 GTF2IP2-201ENST00000424290 697 ntBASIC6.7□□□□□ -1.34
VPS8Q8N3P4 NUTF2P3-201ENST00000448540 384 ntBASIC6.7□□□□□ -1.34
VPS8Q8N3P4 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC6.7□□□□□ -1.34
VPS8Q8N3P4 BNIP3P41-201ENST00000503774 571 ntBASIC6.7□□□□□ -1.34
VPS8Q8N3P4 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC6.7□□□□□ -1.34
VPS8Q8N3P4 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC6.7□□□□□ -1.34
VPS8Q8N3P4 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC6.7□□□□□ -1.34
VPS8Q8N3P4 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
VPS8Q8N3P4 IPO5P1-202ENST00000600039 287 ntBASIC6.7□□□□□ -1.34
VPS8Q8N3P4 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC6.7□□□□□ -1.34
VPS8Q8N3P4 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC6.7□□□□□ -1.34
VPS8Q8N3P4 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC6.7□□□□□ -1.34
VPS8Q8N3P4 AC126323.6-202ENST00000568092 3511 ntBASIC6.7□□□□□ -1.34
VPS8Q8N3P4 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC6.7□□□□□ -1.34
VPS8Q8N3P4 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
VPS8Q8N3P4 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
VPS8Q8N3P4 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
VPS8Q8N3P4 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC6.7□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms