Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 LINC01355-201ENST00000566551 5444 ntBASIC4.84□□□□□ -1.63
RFWD3Q6PCD5 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.84□□□□□ -1.63
RFWD3Q6PCD5 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.84□□□□□ -1.63
RFWD3Q6PCD5 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
RFWD3Q6PCD5 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
RFWD3Q6PCD5 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
RFWD3Q6PCD5 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
RFWD3Q6PCD5 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RFWD3Q6PCD5 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC4.83□□□□□ -1.64
RFWD3Q6PCD5 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.83□□□□□ -1.64
RFWD3Q6PCD5 AP000542.2-201ENST00000623199 6179 ntBASIC4.83□□□□□ -1.64
RFWD3Q6PCD5 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RFWD3Q6PCD5 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RFWD3Q6PCD5 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RFWD3Q6PCD5 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
RFWD3Q6PCD5 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
RFWD3Q6PCD5 AC083799.1-201ENST00000366451 910 ntBASIC4.83□□□□□ -1.64
RFWD3Q6PCD5 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC4.83□□□□□ -1.64
RFWD3Q6PCD5 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.83□□□□□ -1.64
RFWD3Q6PCD5 RN7SKP267-201ENST00000410381 285 ntBASIC4.83□□□□□ -1.64
RFWD3Q6PCD5 VN1R37P-201ENST00000419096 748 ntBASIC4.83□□□□□ -1.64
RFWD3Q6PCD5 RPL7P57-201ENST00000423238 740 ntBASIC4.83□□□□□ -1.64
RFWD3Q6PCD5 AC245028.1-201ENST00000423259 256 ntBASIC4.83□□□□□ -1.64
RFWD3Q6PCD5 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.83□□□□□ -1.64
RFWD3Q6PCD5 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC4.83□□□□□ -1.64
RFWD3Q6PCD5 TDGF1P1-201ENST00000445734 527 ntBASIC4.83□□□□□ -1.64
RFWD3Q6PCD5 H2AFZP5-201ENST00000446960 382 ntBASIC4.83□□□□□ -1.64
RFWD3Q6PCD5 OR6C72P-201ENST00000451403 892 ntBASIC4.83□□□□□ -1.64
RFWD3Q6PCD5 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.83□□□□□ -1.64
RFWD3Q6PCD5 AC005008.1-201ENST00000456151 612 ntBASIC4.83□□□□□ -1.64
RFWD3Q6PCD5 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC4.83□□□□□ -1.64
RFWD3Q6PCD5 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC4.83□□□□□ -1.64
RFWD3Q6PCD5 AK5-208ENST00000478255 556 ntTSL 2 BASIC4.83□□□□□ -1.64
RFWD3Q6PCD5 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RFWD3Q6PCD5 AC111000.3-201ENST00000508057 576 ntBASIC4.83□□□□□ -1.64
RFWD3Q6PCD5 AC134698.5-201ENST00000519444 336 ntBASIC4.83□□□□□ -1.64
RFWD3Q6PCD5 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC4.83□□□□□ -1.64
RFWD3Q6PCD5 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RFWD3Q6PCD5 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC4.83□□□□□ -1.64
RFWD3Q6PCD5 VN1R81P-201ENST00000602085 372 ntBASIC4.83□□□□□ -1.64
RFWD3Q6PCD5 AC068790.4-201ENST00000602474 263 ntBASIC4.83□□□□□ -1.64
RFWD3Q6PCD5 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC4.83□□□□□ -1.64
RFWD3Q6PCD5 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC4.83□□□□□ -1.64
RFWD3Q6PCD5 AC079298.2-201ENST00000623885 459 ntBASIC4.83□□□□□ -1.64
RFWD3Q6PCD5 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC4.83□□□□□ -1.64
RFWD3Q6PCD5 AC005332.5-201ENST00000591222 2919 ntBASIC4.83□□□□□ -1.64
RFWD3Q6PCD5 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RFWD3Q6PCD5 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RFWD3Q6PCD5 AL132640.2-201ENST00000559968 1698 ntBASIC4.83□□□□□ -1.64
RFWD3Q6PCD5 AL445487.1-201ENST00000415694 1580 ntBASIC4.82□□□□□ -1.64
RFWD3Q6PCD5 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
RFWD3Q6PCD5 MFSD4BP1-201ENST00000513330 1552 ntBASIC4.82□□□□□ -1.64
RFWD3Q6PCD5 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
RFWD3Q6PCD5 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
RFWD3Q6PCD5 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.82□□□□□ -1.64
RFWD3Q6PCD5 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
RFWD3Q6PCD5 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
RFWD3Q6PCD5 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
RFWD3Q6PCD5 DHX9P1-201ENST00000436565 3076 ntBASIC4.82□□□□□ -1.64
RFWD3Q6PCD5 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
RFWD3Q6PCD5 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
RFWD3Q6PCD5 RNU1-94P-201ENST00000362627 173 ntBASIC4.82□□□□□ -1.64
RFWD3Q6PCD5 RNA5SP443-201ENST00000363083 132 ntBASIC4.82□□□□□ -1.64
RFWD3Q6PCD5 AL672167.2-201ENST00000377164 879 ntBASIC4.82□□□□□ -1.64
RFWD3Q6PCD5 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
RFWD3Q6PCD5 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.82□□□□□ -1.64
RFWD3Q6PCD5 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
RFWD3Q6PCD5 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC4.82□□□□□ -1.64
RFWD3Q6PCD5 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC4.82□□□□□ -1.64
RFWD3Q6PCD5 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC4.82□□□□□ -1.64
RFWD3Q6PCD5 NMNAT1P2-201ENST00000435192 860 ntBASIC4.82□□□□□ -1.64
RFWD3Q6PCD5 H2AFZP6-201ENST00000444403 394 ntBASIC4.82□□□□□ -1.64
RFWD3Q6PCD5 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC4.82□□□□□ -1.64
RFWD3Q6PCD5 ARL2BPP10-201ENST00000446487 531 ntBASIC4.82□□□□□ -1.64
RFWD3Q6PCD5 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.82□□□□□ -1.64
RFWD3Q6PCD5 OR52A4P-201ENST00000472867 958 ntBASIC4.82□□□□□ -1.64
RFWD3Q6PCD5 RPL36AP41-201ENST00000493820 306 ntBASIC4.82□□□□□ -1.64
RFWD3Q6PCD5 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.82□□□□□ -1.64
RFWD3Q6PCD5 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC4.82□□□□□ -1.64
RFWD3Q6PCD5 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.82□□□□□ -1.64
RFWD3Q6PCD5 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
RFWD3Q6PCD5 MTND2P17-201ENST00000550281 688 ntBASIC4.82□□□□□ -1.64
RFWD3Q6PCD5 AC122134.1-201ENST00000565664 1104 ntBASIC4.82□□□□□ -1.64
RFWD3Q6PCD5 AC209154.1-201ENST00000582156 337 ntBASIC4.82□□□□□ -1.64
RFWD3Q6PCD5 AC004232.3-201ENST00000622977 525 ntBASIC4.82□□□□□ -1.64
RFWD3Q6PCD5 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.82□□□□□ -1.64
RFWD3Q6PCD5 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
RFWD3Q6PCD5 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
RFWD3Q6PCD5 AL121950.1-201ENST00000624993 2077 ntBASIC4.82□□□□□ -1.64
RFWD3Q6PCD5 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.82□□□□□ -1.64
RFWD3Q6PCD5 AC104118.1-201ENST00000607625 1589 ntBASIC4.82□□□□□ -1.64
RFWD3Q6PCD5 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
RFWD3Q6PCD5 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.82□□□□□ -1.64
RFWD3Q6PCD5 DPY19L2P2-203ENST00000435536 1858 ntBASIC4.81□□□□□ -1.64
RFWD3Q6PCD5 DHX40P1-201ENST00000588725 1412 ntBASIC4.81□□□□□ -1.64
RFWD3Q6PCD5 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
RFWD3Q6PCD5 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC4.81□□□□□ -1.64
RFWD3Q6PCD5 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
RFWD3Q6PCD5 AC107068.1-201ENST00000563286 4218 ntBASIC4.81□□□□□ -1.64
RFWD3Q6PCD5 SNORD113.2-201ENST00000364166 89 ntBASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 117.9 ms