Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 MIR5096-201ENST00000583713 70 ntBASIC4.39□□□□□ -1.71
H3F3CQ6NXT2 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC4.39□□□□□ -1.71
H3F3CQ6NXT2 AC010615.3-201ENST00000597319 394 ntBASIC4.39□□□□□ -1.71
H3F3CQ6NXT2 AC068790.4-201ENST00000602474 263 ntBASIC4.39□□□□□ -1.71
H3F3CQ6NXT2 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
H3F3CQ6NXT2 AC005332.5-201ENST00000591222 2919 ntBASIC4.39□□□□□ -1.71
H3F3CQ6NXT2 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
H3F3CQ6NXT2 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.39□□□□□ -1.71
H3F3CQ6NXT2 AC123912.3-201ENST00000600907 1367 ntBASIC4.39□□□□□ -1.71
H3F3CQ6NXT2 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.39□□□□□ -1.71
H3F3CQ6NXT2 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC4.38□□□□□ -1.71
H3F3CQ6NXT2 AL132640.2-201ENST00000559968 1698 ntBASIC4.38□□□□□ -1.71
H3F3CQ6NXT2 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
H3F3CQ6NXT2 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
H3F3CQ6NXT2 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
H3F3CQ6NXT2 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.38□□□□□ -1.71
H3F3CQ6NXT2 BX005019.1-201ENST00000561881 1810 ntBASIC4.38□□□□□ -1.71
H3F3CQ6NXT2 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
H3F3CQ6NXT2 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
H3F3CQ6NXT2 GLULP6-201ENST00000399502 913 ntBASIC4.38□□□□□ -1.71
H3F3CQ6NXT2 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.38□□□□□ -1.71
H3F3CQ6NXT2 RN7SKP267-201ENST00000410381 285 ntBASIC4.38□□□□□ -1.71
H3F3CQ6NXT2 OR51B3P-201ENST00000412287 913 ntBASIC4.38□□□□□ -1.71
H3F3CQ6NXT2 AL591848.1-201ENST00000413092 322 ntBASIC4.38□□□□□ -1.71
H3F3CQ6NXT2 ATG4AP1-201ENST00000416893 538 ntBASIC4.38□□□□□ -1.71
H3F3CQ6NXT2 AC140479.3-201ENST00000418944 1126 ntBASIC4.38□□□□□ -1.71
H3F3CQ6NXT2 MTCYBP7-201ENST00000419540 1134 ntBASIC4.38□□□□□ -1.71
H3F3CQ6NXT2 HMGB1P32-201ENST00000425971 565 ntBASIC4.38□□□□□ -1.71
H3F3CQ6NXT2 NIPA2P1-201ENST00000426223 976 ntBASIC4.38□□□□□ -1.71
H3F3CQ6NXT2 AC097523.2-201ENST00000435551 652 ntBASIC4.38□□□□□ -1.71
H3F3CQ6NXT2 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
H3F3CQ6NXT2 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC4.38□□□□□ -1.71
H3F3CQ6NXT2 CLIC4P1-201ENST00000453177 535 ntBASIC4.38□□□□□ -1.71
H3F3CQ6NXT2 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.38□□□□□ -1.71
H3F3CQ6NXT2 TCP11X3P-202ENST00000514289 1254 ntBASIC4.38□□□□□ -1.71
H3F3CQ6NXT2 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC4.38□□□□□ -1.71
H3F3CQ6NXT2 RN7SKP92-201ENST00000517266 244 ntBASIC4.38□□□□□ -1.71
H3F3CQ6NXT2 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.38□□□□□ -1.71
H3F3CQ6NXT2 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC4.38□□□□□ -1.71
H3F3CQ6NXT2 AL049830.4-201ENST00000555149 351 ntBASIC4.38□□□□□ -1.71
H3F3CQ6NXT2 AC105129.1-201ENST00000560250 297 ntBASIC4.38□□□□□ -1.71
H3F3CQ6NXT2 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.38□□□□□ -1.71
H3F3CQ6NXT2 AC209154.1-201ENST00000582156 337 ntBASIC4.38□□□□□ -1.71
H3F3CQ6NXT2 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC4.38□□□□□ -1.71
H3F3CQ6NXT2 AF230666.2-201ENST00000602328 725 ntBASIC4.38□□□□□ -1.71
H3F3CQ6NXT2 AC019131.2-201ENST00000609071 870 ntBASIC4.38□□□□□ -1.71
H3F3CQ6NXT2 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
H3F3CQ6NXT2 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC4.38□□□□□ -1.71
H3F3CQ6NXT2 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.38□□□□□ -1.71
H3F3CQ6NXT2 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.38□□□□□ -1.71
H3F3CQ6NXT2 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.38□□□□□ -1.71
H3F3CQ6NXT2 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
H3F3CQ6NXT2 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.38□□□□□ -1.71
H3F3CQ6NXT2 AC110792.3-201ENST00000595906 1614 ntBASIC4.38□□□□□ -1.71
H3F3CQ6NXT2 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
H3F3CQ6NXT2 AP000756.2-201ENST00000624168 2567 ntBASIC4.38□□□□□ -1.71
H3F3CQ6NXT2 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.38□□□□□ -1.71
H3F3CQ6NXT2 Z98755.1-201ENST00000407015 1384 ntBASIC4.38□□□□□ -1.71
H3F3CQ6NXT2 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.38□□□□□ -1.71
H3F3CQ6NXT2 RMST-202ENST00000541282 2099 ntTSL 2 BASIC4.37□□□□□ -1.71
H3F3CQ6NXT2 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
H3F3CQ6NXT2 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
H3F3CQ6NXT2 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC4.37□□□□□ -1.71
H3F3CQ6NXT2 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
H3F3CQ6NXT2 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
H3F3CQ6NXT2 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
H3F3CQ6NXT2 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
H3F3CQ6NXT2 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
H3F3CQ6NXT2 RNA5SP332-201ENST00000391063 115 ntBASIC4.37□□□□□ -1.71
H3F3CQ6NXT2 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.37□□□□□ -1.71
H3F3CQ6NXT2 DNAJC19P7-201ENST00000428811 344 ntBASIC4.37□□□□□ -1.71
H3F3CQ6NXT2 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.37□□□□□ -1.71
H3F3CQ6NXT2 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4.37□□□□□ -1.71
H3F3CQ6NXT2 AC073587.1-201ENST00000447093 876 ntBASIC4.37□□□□□ -1.71
H3F3CQ6NXT2 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.37□□□□□ -1.71
H3F3CQ6NXT2 EIF4A1P11-201ENST00000451239 222 ntBASIC4.37□□□□□ -1.71
H3F3CQ6NXT2 CYCSP34-201ENST00000458172 304 ntBASIC4.37□□□□□ -1.71
H3F3CQ6NXT2 RN7SL354P-201ENST00000469282 294 ntBASIC4.37□□□□□ -1.71
H3F3CQ6NXT2 RN7SL481P-201ENST00000477764 299 ntBASIC4.37□□□□□ -1.71
H3F3CQ6NXT2 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC4.37□□□□□ -1.71
H3F3CQ6NXT2 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC4.37□□□□□ -1.71
H3F3CQ6NXT2 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC4.37□□□□□ -1.71
H3F3CQ6NXT2 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC4.37□□□□□ -1.71
H3F3CQ6NXT2 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.37□□□□□ -1.71
H3F3CQ6NXT2 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC4.37□□□□□ -1.71
H3F3CQ6NXT2 AC093249.4-201ENST00000564755 259 ntBASIC4.37□□□□□ -1.71
H3F3CQ6NXT2 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC4.37□□□□□ -1.71
H3F3CQ6NXT2 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC4.37□□□□□ -1.71
H3F3CQ6NXT2 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC4.37□□□□□ -1.71
H3F3CQ6NXT2 AC073091.2-201ENST00000603205 907 ntBASIC4.37□□□□□ -1.71
H3F3CQ6NXT2 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.37□□□□□ -1.71
H3F3CQ6NXT2 SNORD91B-202ENST00000608459 222 ntBASIC4.37□□□□□ -1.71
H3F3CQ6NXT2 MIR8069-1-201ENST00000616627 86 ntBASIC4.37□□□□□ -1.71
H3F3CQ6NXT2 MIR8069-2-201ENST00000621412 86 ntBASIC4.37□□□□□ -1.71
H3F3CQ6NXT2 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.37□□□□□ -1.71
H3F3CQ6NXT2 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC4.37□□□□□ -1.71
H3F3CQ6NXT2 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC4.37□□□□□ -1.71
H3F3CQ6NXT2 DDX18P3-201ENST00000404856 2007 ntBASIC4.37□□□□□ -1.71
H3F3CQ6NXT2 AP000542.2-201ENST00000623199 6179 ntBASIC4.37□□□□□ -1.71
H3F3CQ6NXT2 CASC19-204ENST00000641001 2055 ntBASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms