Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 LPA-201ENST00000316300 6414 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
RC3H1Q5TC82 NRCAM-203ENST00000379024 5782 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
RC3H1Q5TC82 AP002907.1-201ENST00000606361 1430 ntBASIC7.96□□□□□ -1.13
RC3H1Q5TC82 IL1RAP-201ENST00000072516 4697 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
RC3H1Q5TC82 AL596244.1-201ENST00000567068 3779 ntBASIC7.96□□□□□ -1.14
RC3H1Q5TC82 KLHL2-204ENST00000506761 2169 ntTSL 5 BASIC7.96□□□□□ -1.14
RC3H1Q5TC82 OR5P1P-201ENST00000299512 925 ntBASIC7.96□□□□□ -1.14
RC3H1Q5TC82 OR52N5-201ENST00000317093 1034 ntAPPRIS P1 BASIC7.96□□□□□ -1.14
RC3H1Q5TC82 AL121977.1-201ENST00000401636 979 ntBASIC7.96□□□□□ -1.14
RC3H1Q5TC82 Z97832.1-201ENST00000402490 328 ntBASIC7.96□□□□□ -1.14
RC3H1Q5TC82 RPL35AP31-201ENST00000418340 337 ntBASIC7.96□□□□□ -1.14
RC3H1Q5TC82 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC7.96□□□□□ -1.14
RC3H1Q5TC82 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC7.96□□□□□ -1.14
RC3H1Q5TC82 USP9YP16-201ENST00000430287 407 ntBASIC7.96□□□□□ -1.14
RC3H1Q5TC82 OR52B5P-201ENST00000435337 951 ntBASIC7.96□□□□□ -1.14
RC3H1Q5TC82 SDCBPP1-201ENST00000440192 890 ntBASIC7.96□□□□□ -1.14
RC3H1Q5TC82 AL512605.1-202ENST00000441919 381 ntBASIC7.96□□□□□ -1.14
RC3H1Q5TC82 AC064862.4-201ENST00000442180 334 ntBASIC7.96□□□□□ -1.14
RC3H1Q5TC82 AL359955.2-201ENST00000445380 353 ntBASIC7.96□□□□□ -1.14
RC3H1Q5TC82 AL035407.2-201ENST00000454090 378 ntBASIC7.96□□□□□ -1.14
RC3H1Q5TC82 USP9YP23-201ENST00000455085 407 ntBASIC7.96□□□□□ -1.14
RC3H1Q5TC82 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
RC3H1Q5TC82 AL136038.1-201ENST00000497246 351 ntBASIC7.96□□□□□ -1.14
RC3H1Q5TC82 AP005597.4-201ENST00000526762 229 ntBASIC7.96□□□□□ -1.14
RC3H1Q5TC82 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC7.96□□□□□ -1.14
RC3H1Q5TC82 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC7.96□□□□□ -1.14
RC3H1Q5TC82 AL512310.1-201ENST00000548639 172 ntBASIC7.96□□□□□ -1.14
RC3H1Q5TC82 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC7.96□□□□□ -1.14
RC3H1Q5TC82 AC007225.2-201ENST00000562529 256 ntBASIC7.96□□□□□ -1.14
RC3H1Q5TC82 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC7.96□□□□□ -1.14
RC3H1Q5TC82 AC137800.2-201ENST00000574375 120 ntBASIC7.96□□□□□ -1.14
RC3H1Q5TC82 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC7.96□□□□□ -1.14
RC3H1Q5TC82 AC008737.2-201ENST00000599446 118 ntBASIC7.96□□□□□ -1.14
RC3H1Q5TC82 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC7.96□□□□□ -1.14
RC3H1Q5TC82 AC013244.1-201ENST00000604279 193 ntBASIC7.96□□□□□ -1.14
RC3H1Q5TC82 RN7SL787P-201ENST00000613000 284 ntBASIC7.96□□□□□ -1.14
RC3H1Q5TC82 AP000648.2-201ENST00000624182 404 ntBASIC7.96□□□□□ -1.14
RC3H1Q5TC82 TTK-211ENST00000627129 240 ntTSL 5 BASIC7.96□□□□□ -1.14
RC3H1Q5TC82 AC134503.1-201ENST00000633048 54 ntBASIC7.96□□□□□ -1.14
RC3H1Q5TC82 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC7.96□□□□□ -1.14
RC3H1Q5TC82 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC7.96□□□□□ -1.14
RC3H1Q5TC82 SERPINB8-203ENST00000397985 3477 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
RC3H1Q5TC82 AC011379.1-201ENST00000508713 3025 ntBASIC7.96□□□□□ -1.14
RC3H1Q5TC82 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC7.96□□□□□ -1.14
RC3H1Q5TC82 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC7.96□□□□□ -1.14
RC3H1Q5TC82 GAS1RR-201ENST00000415801 4387 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
RC3H1Q5TC82 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC7.96□□□□□ -1.14
RC3H1Q5TC82 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
RC3H1Q5TC82 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
RC3H1Q5TC82 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC7.95□□□□□ -1.14
RC3H1Q5TC82 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC7.95□□□□□ -1.14
RC3H1Q5TC82 SLC35E3-202ENST00000398004 17791 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
RC3H1Q5TC82 NRK-201ENST00000243300 8062 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
RC3H1Q5TC82 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
RC3H1Q5TC82 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC7.95□□□□□ -1.14
RC3H1Q5TC82 CBR4-201ENST00000306193 3443 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
RC3H1Q5TC82 NEUROD4-201ENST00000242994 3953 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
RC3H1Q5TC82 TMEM68-219ENST00000617977 4512 ntTSL 5 BASIC7.95□□□□□ -1.14
RC3H1Q5TC82 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC7.95□□□□□ -1.14
RC3H1Q5TC82 RPL21P132-201ENST00000331267 462 ntBASIC7.95□□□□□ -1.14
RC3H1Q5TC82 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
RC3H1Q5TC82 RNU5F-6P-201ENST00000362979 116 ntBASIC7.95□□□□□ -1.14
RC3H1Q5TC82 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
RC3H1Q5TC82 RNU6-31P-201ENST00000384388 108 ntBASIC7.95□□□□□ -1.14
RC3H1Q5TC82 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
RC3H1Q5TC82 ERMN-204ENST00000409925 556 ntTSL 4 BASIC7.95□□□□□ -1.14
RC3H1Q5TC82 RNA5SP156-201ENST00000410250 110 ntBASIC7.95□□□□□ -1.14
RC3H1Q5TC82 RN7SKP286-201ENST00000410894 299 ntBASIC7.95□□□□□ -1.14
RC3H1Q5TC82 Z93019.1-201ENST00000416450 973 ntBASIC7.95□□□□□ -1.14
RC3H1Q5TC82 BTF3P9-201ENST00000418784 283 ntBASIC7.95□□□□□ -1.14
RC3H1Q5TC82 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
RC3H1Q5TC82 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC7.95□□□□□ -1.14
RC3H1Q5TC82 FAM96AP1-201ENST00000430879 482 ntBASIC7.95□□□□□ -1.14
RC3H1Q5TC82 IGKV1OR10-1-201ENST00000442306 329 ntBASIC7.95□□□□□ -1.14
RC3H1Q5TC82 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC7.95□□□□□ -1.14
RC3H1Q5TC82 ARPC3P2-201ENST00000457786 533 ntBASIC7.95□□□□□ -1.14
RC3H1Q5TC82 IGKV1OR22-5-201ENST00000458718 354 ntBASIC7.95□□□□□ -1.14
RC3H1Q5TC82 AC110749.1-201ENST00000462007 357 ntBASIC7.95□□□□□ -1.14
RC3H1Q5TC82 RPSAP39-201ENST00000467439 883 ntBASIC7.95□□□□□ -1.14
RC3H1Q5TC82 RPL23AP37-201ENST00000479658 549 ntBASIC7.95□□□□□ -1.14
RC3H1Q5TC82 AC091544.1-201ENST00000484702 348 ntBASIC7.95□□□□□ -1.14
RC3H1Q5TC82 AC090013.1-201ENST00000485147 480 ntBASIC7.95□□□□□ -1.14
RC3H1Q5TC82 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC7.95□□□□□ -1.14
RC3H1Q5TC82 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC7.95□□□□□ -1.14
RC3H1Q5TC82 Y_RNA.693-201ENST00000516641 110 ntBASIC7.95□□□□□ -1.14
RC3H1Q5TC82 CA1-215ENST00000522389 551 ntTSL 3 BASIC7.95□□□□□ -1.14
RC3H1Q5TC82 OR5M7P-201ENST00000526140 972 ntBASIC7.95□□□□□ -1.14
RC3H1Q5TC82 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC7.95□□□□□ -1.14
RC3H1Q5TC82 YWHABP2-201ENST00000540201 713 ntBASIC7.95□□□□□ -1.14
RC3H1Q5TC82 OR6C73P-201ENST00000546432 358 ntBASIC7.95□□□□□ -1.14
RC3H1Q5TC82 BICD1-206ENST00000551086 423 ntTSL 3 BASIC7.95□□□□□ -1.14
RC3H1Q5TC82 AC011611.1-201ENST00000552179 197 ntBASIC7.95□□□□□ -1.14
RC3H1Q5TC82 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC7.95□□□□□ -1.14
RC3H1Q5TC82 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC7.95□□□□□ -1.14
RC3H1Q5TC82 MIR3171-201ENST00000584270 74 ntBASIC7.95□□□□□ -1.14
RC3H1Q5TC82 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC7.95□□□□□ -1.14
RC3H1Q5TC82 AC022916.3-201ENST00000592961 742 ntBASIC7.95□□□□□ -1.14
RC3H1Q5TC82 AC107214.2-201ENST00000608204 634 ntBASIC7.95□□□□□ -1.14
RC3H1Q5TC82 AL008723.3-201ENST00000608926 449 ntBASIC7.95□□□□□ -1.14
RC3H1Q5TC82 AP005431.1-201ENST00000618479 319 ntBASIC7.95□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 126.2 ms