Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 RNA5SP34-201ENST00000516887 130 ntBASIC4.28□□□□□ -1.72
RFX4Q33E94 OR5M7P-201ENST00000526140 972 ntBASIC4.28□□□□□ -1.72
RFX4Q33E94 RGS5-219ENST00000528019 512 ntTSL 4 BASIC4.28□□□□□ -1.72
RFX4Q33E94 CYP4A43P-201ENST00000568156 121 ntBASIC4.28□□□□□ -1.72
RFX4Q33E94 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
RFX4Q33E94 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC4.28□□□□□ -1.72
RFX4Q33E94 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC4.28□□□□□ -1.72
RFX4Q33E94 AC022726.1-201ENST00000587475 207 ntBASIC4.28□□□□□ -1.72
RFX4Q33E94 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC4.28□□□□□ -1.72
RFX4Q33E94 AC008638.3-201ENST00000603341 463 ntBASIC4.28□□□□□ -1.72
RFX4Q33E94 AC020910.3-201ENST00000603701 874 ntBASIC4.28□□□□□ -1.72
RFX4Q33E94 AC011453.2-201ENST00000603737 729 ntBASIC4.28□□□□□ -1.72
RFX4Q33E94 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC4.28□□□□□ -1.72
RFX4Q33E94 AL121612.2-201ENST00000612261 482 ntBASIC4.28□□□□□ -1.72
RFX4Q33E94 AC009163.6-201ENST00000612367 342 ntBASIC4.28□□□□□ -1.72
RFX4Q33E94 MIR6862-1-201ENST00000613016 70 ntBASIC4.28□□□□□ -1.72
RFX4Q33E94 EIF3FP1-201ENST00000613970 806 ntBASIC4.28□□□□□ -1.72
RFX4Q33E94 MIR6862-2-201ENST00000614755 70 ntBASIC4.28□□□□□ -1.72
RFX4Q33E94 MIR6729-201ENST00000618194 65 ntBASIC4.28□□□□□ -1.72
RFX4Q33E94 AC009704.2-201ENST00000618739 483 ntBASIC4.28□□□□□ -1.72
RFX4Q33E94 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.28□□□□□ -1.72
RFX4Q33E94 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC4.28□□□□□ -1.72
RFX4Q33E94 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC4.28□□□□□ -1.72
RFX4Q33E94 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
RFX4Q33E94 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.28□□□□□ -1.73
RFX4Q33E94 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
RFX4Q33E94 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.27□□□□□ -1.73
RFX4Q33E94 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
RFX4Q33E94 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.27□□□□□ -1.73
RFX4Q33E94 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
RFX4Q33E94 AC011266.1-201ENST00000624119 3569 ntBASIC4.27□□□□□ -1.73
RFX4Q33E94 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
RFX4Q33E94 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
RFX4Q33E94 U8.4-201ENST00000363626 134 ntBASIC4.27□□□□□ -1.73
RFX4Q33E94 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC4.27□□□□□ -1.73
RFX4Q33E94 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC4.27□□□□□ -1.73
RFX4Q33E94 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC4.27□□□□□ -1.73
RFX4Q33E94 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC4.27□□□□□ -1.73
RFX4Q33E94 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
RFX4Q33E94 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC4.27□□□□□ -1.73
RFX4Q33E94 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC4.27□□□□□ -1.73
RFX4Q33E94 AC092905.1-201ENST00000467527 949 ntBASIC4.27□□□□□ -1.73
RFX4Q33E94 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC4.27□□□□□ -1.73
RFX4Q33E94 PPM1AP1-201ENST00000502740 1135 ntBASIC4.27□□□□□ -1.73
RFX4Q33E94 AC006499.3-201ENST00000506077 748 ntBASIC4.27□□□□□ -1.73
RFX4Q33E94 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC4.27□□□□□ -1.73
RFX4Q33E94 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.27□□□□□ -1.73
RFX4Q33E94 IFITM8P-201ENST00000522529 394 ntBASIC4.27□□□□□ -1.73
RFX4Q33E94 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.27□□□□□ -1.73
RFX4Q33E94 AC133555.2-201ENST00000550213 292 ntBASIC4.27□□□□□ -1.73
RFX4Q33E94 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC4.27□□□□□ -1.73
RFX4Q33E94 MIR3691-201ENST00000578066 90 ntBASIC4.27□□□□□ -1.73
RFX4Q33E94 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC4.27□□□□□ -1.73
RFX4Q33E94 MIR6886-201ENST00000619864 61 ntBASIC4.27□□□□□ -1.73
RFX4Q33E94 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
RFX4Q33E94 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC4.27□□□□□ -1.73
RFX4Q33E94 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
RFX4Q33E94 AC097504.1-201ENST00000515103 2415 ntBASIC4.27□□□□□ -1.73
RFX4Q33E94 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC4.27□□□□□ -1.73
RFX4Q33E94 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.27□□□□□ -1.73
RFX4Q33E94 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.27□□□□□ -1.73
RFX4Q33E94 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
RFX4Q33E94 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
RFX4Q33E94 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
RFX4Q33E94 AC068254.2-201ENST00000623938 3577 ntBASIC4.27□□□□□ -1.73
RFX4Q33E94 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
RFX4Q33E94 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.26□□□□□ -1.73
RFX4Q33E94 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
RFX4Q33E94 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
RFX4Q33E94 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
RFX4Q33E94 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
RFX4Q33E94 RNU1-15P-201ENST00000353977 144 ntBASIC4.26□□□□□ -1.73
RFX4Q33E94 RNA5SP151-201ENST00000365632 117 ntBASIC4.26□□□□□ -1.73
RFX4Q33E94 RNU1-106P-201ENST00000384382 164 ntBASIC4.26□□□□□ -1.73
RFX4Q33E94 RNU6-178P-201ENST00000384631 104 ntBASIC4.26□□□□□ -1.73
RFX4Q33E94 AL645733.1-201ENST00000402250 217 ntBASIC4.26□□□□□ -1.73
RFX4Q33E94 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC4.26□□□□□ -1.73
RFX4Q33E94 EIF4A1P3-201ENST00000411521 244 ntBASIC4.26□□□□□ -1.73
RFX4Q33E94 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
RFX4Q33E94 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
RFX4Q33E94 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.26□□□□□ -1.73
RFX4Q33E94 AC005532.2-201ENST00000467154 373 ntBASIC4.26□□□□□ -1.73
RFX4Q33E94 AC109462.1-201ENST00000491087 368 ntBASIC4.26□□□□□ -1.73
RFX4Q33E94 AC098799.3-201ENST00000506095 438 ntBASIC4.26□□□□□ -1.73
RFX4Q33E94 PARP4P3-201ENST00000510265 317 ntBASIC4.26□□□□□ -1.73
RFX4Q33E94 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC4.26□□□□□ -1.73
RFX4Q33E94 RN7SKP147-201ENST00000517154 244 ntBASIC4.26□□□□□ -1.73
RFX4Q33E94 IGHV3-63-201ENST00000518422 341 ntBASIC4.26□□□□□ -1.73
RFX4Q33E94 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.26□□□□□ -1.73
RFX4Q33E94 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC4.26□□□□□ -1.73
RFX4Q33E94 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC4.26□□□□□ -1.73
RFX4Q33E94 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.26□□□□□ -1.73
RFX4Q33E94 AP002360.3-201ENST00000607673 710 ntBASIC4.26□□□□□ -1.73
RFX4Q33E94 OR7A19P-201ENST00000608051 733 ntBASIC4.26□□□□□ -1.73
RFX4Q33E94 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC4.26□□□□□ -1.73
RFX4Q33E94 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
RFX4Q33E94 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.26□□□□□ -1.73
RFX4Q33E94 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
RFX4Q33E94 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC4.26□□□□□ -1.73
RFX4Q33E94 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms