Protein–RNA interactions for Protein: Q12946

FOXF1, Forkhead box protein F1, humanhuman

Predictions only

Length 379 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXF1Q12946 AC068790.4-201ENST00000602474 263 ntBASIC4.03□□□□□ -1.76
FOXF1Q12946 AL160290.3-201ENST00000604869 165 ntBASIC4.03□□□□□ -1.76
FOXF1Q12946 AC010201.1-201ENST00000605051 540 ntBASIC4.03□□□□□ -1.76
FOXF1Q12946 AC019193.2-201ENST00000610012 634 ntBASIC4.03□□□□□ -1.76
FOXF1Q12946 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
FOXF1Q12946 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.03□□□□□ -1.76
FOXF1Q12946 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
FOXF1Q12946 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC4.03□□□□□ -1.76
FOXF1Q12946 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.76
FOXF1Q12946 EOGT-210ENST00000615922 1931 ntBASIC4.03□□□□□ -1.76
FOXF1Q12946 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
FOXF1Q12946 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
FOXF1Q12946 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
FOXF1Q12946 AL592182.3-201ENST00000642132 3304 ntBASIC4.03□□□□□ -1.76
FOXF1Q12946 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.03□□□□□ -1.76
FOXF1Q12946 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.03□□□□□ -1.77
FOXF1Q12946 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.03□□□□□ -1.77
FOXF1Q12946 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC4.03□□□□□ -1.77
FOXF1Q12946 AC015813.6-201ENST00000624409 5808 ntBASIC4.02□□□□□ -1.77
FOXF1Q12946 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
FOXF1Q12946 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.02□□□□□ -1.77
FOXF1Q12946 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
FOXF1Q12946 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
FOXF1Q12946 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
FOXF1Q12946 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
FOXF1Q12946 IGKV7-3-201ENST00000357453 298 ntBASIC4.02□□□□□ -1.77
FOXF1Q12946 RNU1-130P-201ENST00000363930 160 ntBASIC4.02□□□□□ -1.77
FOXF1Q12946 RNU1-44P-201ENST00000384453 163 ntBASIC4.02□□□□□ -1.77
FOXF1Q12946 RN7SKP167-201ENST00000411047 285 ntBASIC4.02□□□□□ -1.77
FOXF1Q12946 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.02□□□□□ -1.77
FOXF1Q12946 VDAC1P9-201ENST00000412766 841 ntBASIC4.02□□□□□ -1.77
FOXF1Q12946 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.02□□□□□ -1.77
FOXF1Q12946 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC4.02□□□□□ -1.77
FOXF1Q12946 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.02□□□□□ -1.77
FOXF1Q12946 TXNP2-201ENST00000443918 295 ntBASIC4.02□□□□□ -1.77
FOXF1Q12946 AC073587.1-201ENST00000447093 876 ntBASIC4.02□□□□□ -1.77
FOXF1Q12946 AL591623.2-201ENST00000449978 222 ntBASIC4.02□□□□□ -1.77
FOXF1Q12946 VN1R32P-201ENST00000452234 905 ntBASIC4.02□□□□□ -1.77
FOXF1Q12946 AC092905.1-201ENST00000467527 949 ntBASIC4.02□□□□□ -1.77
FOXF1Q12946 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC4.02□□□□□ -1.77
FOXF1Q12946 AC091544.1-201ENST00000484702 348 ntBASIC4.02□□□□□ -1.77
FOXF1Q12946 AC015795.1-201ENST00000513669 327 ntBASIC4.02□□□□□ -1.77
FOXF1Q12946 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.02□□□□□ -1.77
FOXF1Q12946 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC4.02□□□□□ -1.77
FOXF1Q12946 AC022882.1-201ENST00000532142 501 ntBASIC4.02□□□□□ -1.77
FOXF1Q12946 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
FOXF1Q12946 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.02□□□□□ -1.77
FOXF1Q12946 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
FOXF1Q12946 Z98200.1-201ENST00000607298 470 ntBASIC4.02□□□□□ -1.77
FOXF1Q12946 MIR6891-201ENST00000618788 93 ntBASIC4.02□□□□□ -1.77
FOXF1Q12946 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC4.02□□□□□ -1.77
FOXF1Q12946 AC007546.2-201ENST00000623996 360 ntBASIC4.02□□□□□ -1.77
FOXF1Q12946 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
FOXF1Q12946 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
FOXF1Q12946 SCN1A-220ENST00000641603 12506 ntBASIC4.02□□□□□ -1.77
FOXF1Q12946 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.02□□□□□ -1.77
FOXF1Q12946 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.02□□□□□ -1.77
FOXF1Q12946 AC025031.4-201ENST00000621248 3271 ntBASIC4.02□□□□□ -1.77
FOXF1Q12946 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.02□□□□□ -1.77
FOXF1Q12946 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
FOXF1Q12946 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
FOXF1Q12946 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
FOXF1Q12946 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
FOXF1Q12946 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.01□□□□□ -1.77
FOXF1Q12946 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.01□□□□□ -1.77
FOXF1Q12946 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
FOXF1Q12946 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.01□□□□□ -1.77
FOXF1Q12946 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.01□□□□□ -1.77
FOXF1Q12946 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.01□□□□□ -1.77
FOXF1Q12946 AC008033.1-201ENST00000216407 1162 ntBASIC4.01□□□□□ -1.77
FOXF1Q12946 MIR195-201ENST00000385194 87 ntBASIC4.01□□□□□ -1.77
FOXF1Q12946 AL139039.2-201ENST00000407436 479 ntBASIC4.01□□□□□ -1.77
FOXF1Q12946 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC4.01□□□□□ -1.77
FOXF1Q12946 UBE2V1P3-201ENST00000439651 417 ntBASIC4.01□□□□□ -1.77
FOXF1Q12946 CEACAMP9-201ENST00000442990 513 ntBASIC4.01□□□□□ -1.77
FOXF1Q12946 snoU13.1-201ENST00000459157 104 ntBASIC4.01□□□□□ -1.77
FOXF1Q12946 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC4.01□□□□□ -1.77
FOXF1Q12946 AK5-208ENST00000478255 556 ntTSL 2 BASIC4.01□□□□□ -1.77
FOXF1Q12946 AC013356.1-201ENST00000489027 564 ntBASIC4.01□□□□□ -1.77
FOXF1Q12946 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.01□□□□□ -1.77
FOXF1Q12946 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC4.01□□□□□ -1.77
FOXF1Q12946 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.01□□□□□ -1.77
FOXF1Q12946 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.01□□□□□ -1.77
FOXF1Q12946 AC008745.1-201ENST00000604064 271 ntBASIC4.01□□□□□ -1.77
FOXF1Q12946 AC020763.5-201ENST00000623298 430 ntBASIC4.01□□□□□ -1.77
FOXF1Q12946 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC4.01□□□□□ -1.77
FOXF1Q12946 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC4.01□□□□□ -1.77
FOXF1Q12946 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.01□□□□□ -1.77
FOXF1Q12946 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.01□□□□□ -1.77
FOXF1Q12946 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
FOXF1Q12946 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.01□□□□□ -1.77
FOXF1Q12946 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC4.01□□□□□ -1.77
FOXF1Q12946 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
FOXF1Q12946 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
FOXF1Q12946 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
FOXF1Q12946 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4□□□□□ -1.77
FOXF1Q12946 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4□□□□□ -1.77
FOXF1Q12946 ACTR3BP2-202ENST00000623630 1338 ntBASIC4□□□□□ -1.77
FOXF1Q12946 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
FOXF1Q12946 AC068254.2-201ENST00000623938 3577 ntBASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms