Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.57□□□□□ -1.68
SCN1BQ07699 RNU6-334P-201ENST00000517072 102 ntBASIC4.57□□□□□ -1.68
SCN1BQ07699 LY96-202ENST00000518893 430 ntTSL 3 BASIC4.57□□□□□ -1.68
SCN1BQ07699 RPL23AP53-201ENST00000521854 457 ntBASIC4.57□□□□□ -1.68
SCN1BQ07699 AC113192.3-201ENST00000529152 742 ntBASIC4.57□□□□□ -1.68
SCN1BQ07699 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC4.57□□□□□ -1.68
SCN1BQ07699 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC4.57□□□□□ -1.68
SCN1BQ07699 AC107958.1-201ENST00000556576 290 ntBASIC4.57□□□□□ -1.68
SCN1BQ07699 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
SCN1BQ07699 PDCD6IPP2-207ENST00000566321 1069 ntBASIC4.57□□□□□ -1.68
SCN1BQ07699 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC4.57□□□□□ -1.68
SCN1BQ07699 ATP5F1P7-201ENST00000567330 760 ntBASIC4.57□□□□□ -1.68
SCN1BQ07699 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC4.57□□□□□ -1.68
SCN1BQ07699 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.57□□□□□ -1.68
SCN1BQ07699 AC012616.1-201ENST00000600294 197 ntBASIC4.57□□□□□ -1.68
SCN1BQ07699 AC233280.2-201ENST00000603917 1070 ntBASIC4.57□□□□□ -1.68
SCN1BQ07699 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.57□□□□□ -1.68
SCN1BQ07699 AC015804.1-201ENST00000622935 435 ntBASIC4.57□□□□□ -1.68
SCN1BQ07699 OR8A1-204ENST00000642111 1145 ntBASIC4.57□□□□□ -1.68
SCN1BQ07699 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SCN1BQ07699 AL592437.2-201ENST00000421655 2434 ntBASIC4.57□□□□□ -1.68
SCN1BQ07699 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
SCN1BQ07699 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.57□□□□□ -1.68
SCN1BQ07699 AC119744.1-201ENST00000454746 1715 ntBASIC4.57□□□□□ -1.68
SCN1BQ07699 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SCN1BQ07699 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.57□□□□□ -1.68
SCN1BQ07699 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
SCN1BQ07699 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SCN1BQ07699 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SCN1BQ07699 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC4.56□□□□□ -1.68
SCN1BQ07699 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SCN1BQ07699 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SCN1BQ07699 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC4.56□□□□□ -1.68
SCN1BQ07699 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SCN1BQ07699 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC4.56□□□□□ -1.68
SCN1BQ07699 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SCN1BQ07699 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
SCN1BQ07699 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SCN1BQ07699 IL6STP1-201ENST00000346911 1020 ntBASIC4.56□□□□□ -1.68
SCN1BQ07699 RNA5SP46-201ENST00000362370 120 ntBASIC4.56□□□□□ -1.68
SCN1BQ07699 RNA5SP391-201ENST00000363456 119 ntBASIC4.56□□□□□ -1.68
SCN1BQ07699 SNORA16A-201ENST00000384342 137 ntBASIC4.56□□□□□ -1.68
SCN1BQ07699 RNA5SP122-201ENST00000384457 108 ntBASIC4.56□□□□□ -1.68
SCN1BQ07699 MIR621-201ENST00000384919 96 ntBASIC4.56□□□□□ -1.68
SCN1BQ07699 MIR589-201ENST00000385238 99 ntBASIC4.56□□□□□ -1.68
SCN1BQ07699 SNORA40.4-201ENST00000390971 128 ntBASIC4.56□□□□□ -1.68
SCN1BQ07699 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SCN1BQ07699 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SCN1BQ07699 GSTM5P1-201ENST00000434751 660 ntBASIC4.56□□□□□ -1.68
SCN1BQ07699 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.56□□□□□ -1.68
SCN1BQ07699 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SCN1BQ07699 MOB1AP2-201ENST00000446060 614 ntBASIC4.56□□□□□ -1.68
SCN1BQ07699 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC4.56□□□□□ -1.68
SCN1BQ07699 YWHAEP1-201ENST00000453697 763 ntBASIC4.56□□□□□ -1.68
SCN1BQ07699 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC4.56□□□□□ -1.68
SCN1BQ07699 EIF4A2P2-201ENST00000455776 1070 ntBASIC4.56□□□□□ -1.68
SCN1BQ07699 EIF2S2P5-201ENST00000457635 968 ntBASIC4.56□□□□□ -1.68
SCN1BQ07699 AC096992.1-201ENST00000459808 709 ntBASIC4.56□□□□□ -1.68
SCN1BQ07699 RPL32P14-201ENST00000463196 378 ntBASIC4.56□□□□□ -1.68
SCN1BQ07699 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC4.56□□□□□ -1.68
SCN1BQ07699 AC093763.2-201ENST00000505334 1223 ntBASIC4.56□□□□□ -1.68
SCN1BQ07699 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC4.56□□□□□ -1.68
SCN1BQ07699 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC4.56□□□□□ -1.68
SCN1BQ07699 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC4.56□□□□□ -1.68
SCN1BQ07699 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.56□□□□□ -1.68
SCN1BQ07699 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
SCN1BQ07699 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC4.56□□□□□ -1.68
SCN1BQ07699 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC4.56□□□□□ -1.68
SCN1BQ07699 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC4.56□□□□□ -1.68
SCN1BQ07699 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC4.56□□□□□ -1.68
SCN1BQ07699 AP000919.1-202ENST00000581139 1264 ntBASIC4.56□□□□□ -1.68
SCN1BQ07699 RN7SL356P-201ENST00000582228 248 ntBASIC4.56□□□□□ -1.68
SCN1BQ07699 MIR4505-201ENST00000582238 73 ntBASIC4.56□□□□□ -1.68
SCN1BQ07699 MRO-208ENST00000588444 866 ntTSL 3 BASIC4.56□□□□□ -1.68
SCN1BQ07699 ADAD1P2-201ENST00000588476 646 ntBASIC4.56□□□□□ -1.68
SCN1BQ07699 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC4.56□□□□□ -1.68
SCN1BQ07699 ABI1P1-201ENST00000603375 1120 ntBASIC4.56□□□□□ -1.68
SCN1BQ07699 AC011626.1-201ENST00000604710 562 ntBASIC4.56□□□□□ -1.68
SCN1BQ07699 AC005972.3-201ENST00000606304 481 ntBASIC4.56□□□□□ -1.68
SCN1BQ07699 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC4.56□□□□□ -1.68
SCN1BQ07699 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC4.56□□□□□ -1.68
SCN1BQ07699 AC096586.1-201ENST00000610267 561 ntBASIC4.56□□□□□ -1.68
SCN1BQ07699 VN1R9P-201ENST00000614184 867 ntBASIC4.56□□□□□ -1.68
SCN1BQ07699 AL118522.2-201ENST00000616045 615 ntBASIC4.56□□□□□ -1.68
SCN1BQ07699 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SCN1BQ07699 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SCN1BQ07699 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
SCN1BQ07699 CD86-204ENST00000469710 1604 ntTSL 2 BASIC4.56□□□□□ -1.68
SCN1BQ07699 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SCN1BQ07699 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.56□□□□□ -1.68
SCN1BQ07699 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC4.56□□□□□ -1.68
SCN1BQ07699 AC120338.1-201ENST00000625074 1541 ntBASIC4.56□□□□□ -1.68
SCN1BQ07699 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC4.56□□□□□ -1.68
SCN1BQ07699 AC007529.1-201ENST00000418574 2178 ntBASIC4.55□□□□□ -1.68
SCN1BQ07699 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
SCN1BQ07699 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.55□□□□□ -1.68
SCN1BQ07699 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SCN1BQ07699 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC4.55□□□□□ -1.68
SCN1BQ07699 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC4.55□□□□□ -1.68
SCN1BQ07699 RNU1-87P-201ENST00000363727 170 ntBASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms