Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC4.81□□□□□ -1.64
LTBQ06643 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC4.81□□□□□ -1.64
LTBQ06643 AP000916.1-201ENST00000533869 835 ntBASIC4.81□□□□□ -1.64
LTBQ06643 YWHABP2-201ENST00000540201 713 ntBASIC4.81□□□□□ -1.64
LTBQ06643 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC4.81□□□□□ -1.64
LTBQ06643 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC4.81□□□□□ -1.64
LTBQ06643 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC4.81□□□□□ -1.64
LTBQ06643 AC104229.1-201ENST00000561364 255 ntBASIC4.81□□□□□ -1.64
LTBQ06643 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC4.81□□□□□ -1.64
LTBQ06643 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC4.81□□□□□ -1.64
LTBQ06643 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC4.81□□□□□ -1.64
LTBQ06643 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC4.81□□□□□ -1.64
LTBQ06643 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC4.81□□□□□ -1.64
LTBQ06643 AC012557.2-201ENST00000605919 418 ntBASIC4.81□□□□□ -1.64
LTBQ06643 AC107952.2-201ENST00000606048 486 ntBASIC4.81□□□□□ -1.64
LTBQ06643 AC109583.2-201ENST00000617367 129 ntBASIC4.81□□□□□ -1.64
LTBQ06643 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC4.81□□□□□ -1.64
LTBQ06643 AL121594.5-201ENST00000631724 573 ntBASIC4.81□□□□□ -1.64
LTBQ06643 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC4.81□□□□□ -1.64
LTBQ06643 BX649567.1-201ENST00000642071 1134 ntBASIC4.81□□□□□ -1.64
LTBQ06643 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
LTBQ06643 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC4.81□□□□□ -1.64
LTBQ06643 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
LTBQ06643 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC4.81□□□□□ -1.64
LTBQ06643 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC4.81□□□□□ -1.64
LTBQ06643 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
LTBQ06643 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
LTBQ06643 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
LTBQ06643 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
LTBQ06643 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
LTBQ06643 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
LTBQ06643 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
LTBQ06643 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
LTBQ06643 MUC2-202ENST00000613187 4845 ntBASIC4.8□□□□□ -1.64
LTBQ06643 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
LTBQ06643 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
LTBQ06643 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.8□□□□□ -1.64
LTBQ06643 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
LTBQ06643 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
LTBQ06643 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
LTBQ06643 ADAM5-202ENST00000399789 1942 ntBASIC4.8□□□□□ -1.64
LTBQ06643 AL513185.3-201ENST00000433335 1300 ntBASIC4.8□□□□□ -1.64
LTBQ06643 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
LTBQ06643 AL034549.2-201ENST00000618285 3373 ntBASIC4.8□□□□□ -1.64
LTBQ06643 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
LTBQ06643 ZNF733P-202ENST00000444809 1573 ntBASIC4.8□□□□□ -1.64
LTBQ06643 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
LTBQ06643 SSX3-202ENST00000376893 800 ntTSL 2 BASIC4.8□□□□□ -1.64
LTBQ06643 SNORD116-8-201ENST00000384365 95 ntBASIC4.8□□□□□ -1.64
LTBQ06643 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
LTBQ06643 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC4.8□□□□□ -1.64
LTBQ06643 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC4.8□□□□□ -1.64
LTBQ06643 AL449283.1-202ENST00000418249 604 ntBASIC4.8□□□□□ -1.64
LTBQ06643 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
LTBQ06643 DSTNP5-201ENST00000427921 523 ntBASIC4.8□□□□□ -1.64
LTBQ06643 AC124944.2-201ENST00000429866 1242 ntBASIC4.8□□□□□ -1.64
LTBQ06643 UBE2V1P1-201ENST00000430836 445 ntBASIC4.8□□□□□ -1.64
LTBQ06643 CYCSP6-201ENST00000434498 302 ntBASIC4.8□□□□□ -1.64
LTBQ06643 MTND4P32-201ENST00000437189 1237 ntBASIC4.8□□□□□ -1.64
LTBQ06643 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
LTBQ06643 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC4.8□□□□□ -1.64
LTBQ06643 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
LTBQ06643 AL627224.1-201ENST00000448334 444 ntBASIC4.8□□□□□ -1.64
LTBQ06643 BUD31P2-201ENST00000449374 300 ntBASIC4.8□□□□□ -1.64
LTBQ06643 AC112492.1-201ENST00000449607 712 ntBASIC4.8□□□□□ -1.64
LTBQ06643 OFD1P7Y-201ENST00000454643 1155 ntBASIC4.8□□□□□ -1.64
LTBQ06643 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC4.8□□□□□ -1.64
LTBQ06643 RPL7P41-201ENST00000485823 957 ntBASIC4.8□□□□□ -1.64
LTBQ06643 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC4.8□□□□□ -1.64
LTBQ06643 RN7SL346P-201ENST00000491561 294 ntBASIC4.8□□□□□ -1.64
LTBQ06643 AC021087.2-201ENST00000504656 1203 ntBASIC4.8□□□□□ -1.64
LTBQ06643 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC4.8□□□□□ -1.64
LTBQ06643 ENPP7P11-201ENST00000505915 627 ntBASIC4.8□□□□□ -1.64
LTBQ06643 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC4.8□□□□□ -1.64
LTBQ06643 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC4.8□□□□□ -1.64
LTBQ06643 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC4.8□□□□□ -1.64
LTBQ06643 AC118465.1-201ENST00000513820 1271 ntBASIC4.8□□□□□ -1.64
LTBQ06643 RFPL4AP3-201ENST00000515267 345 ntBASIC4.8□□□□□ -1.64
LTBQ06643 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC4.8□□□□□ -1.64
LTBQ06643 BUD31P1-201ENST00000521828 359 ntBASIC4.8□□□□□ -1.64
LTBQ06643 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC4.8□□□□□ -1.64
LTBQ06643 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC4.8□□□□□ -1.64
LTBQ06643 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC4.8□□□□□ -1.64
LTBQ06643 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC4.8□□□□□ -1.64
LTBQ06643 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC4.8□□□□□ -1.64
LTBQ06643 AL442163.2-201ENST00000553912 710 ntBASIC4.8□□□□□ -1.64
LTBQ06643 AC005341.1-201ENST00000571086 708 ntBASIC4.8□□□□□ -1.64
LTBQ06643 AC127024.5-201ENST00000580085 462 ntBASIC4.8□□□□□ -1.64
LTBQ06643 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC4.8□□□□□ -1.64
LTBQ06643 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC4.8□□□□□ -1.64
LTBQ06643 VN1R78P-201ENST00000597393 564 ntBASIC4.8□□□□□ -1.64
LTBQ06643 AC110760.3-201ENST00000598794 467 ntBASIC4.8□□□□□ -1.64
LTBQ06643 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC4.8□□□□□ -1.64
LTBQ06643 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC4.8□□□□□ -1.64
LTBQ06643 AC015726.1-201ENST00000602353 681 ntBASIC4.8□□□□□ -1.64
LTBQ06643 AC021171.1-201ENST00000603137 706 ntBASIC4.8□□□□□ -1.64
LTBQ06643 AL162431.4-201ENST00000604674 411 ntBASIC4.8□□□□□ -1.64
LTBQ06643 AC011626.1-201ENST00000604710 562 ntBASIC4.8□□□□□ -1.64
LTBQ06643 AC073387.2-201ENST00000604797 784 ntBASIC4.8□□□□□ -1.64
LTBQ06643 MIR6839-201ENST00000620425 113 ntBASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms