Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.36□□□□□ -1.71
HMGCS1Q01581 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.36□□□□□ -1.71
HMGCS1Q01581 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.36□□□□□ -1.71
HMGCS1Q01581 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC4.36□□□□□ -1.71
HMGCS1Q01581 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC4.36□□□□□ -1.71
HMGCS1Q01581 RPS27AP15-201ENST00000447672 466 ntBASIC4.36□□□□□ -1.71
HMGCS1Q01581 MTND4LP12-201ENST00000448237 295 ntBASIC4.36□□□□□ -1.71
HMGCS1Q01581 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC4.36□□□□□ -1.71
HMGCS1Q01581 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
HMGCS1Q01581 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.36□□□□□ -1.71
HMGCS1Q01581 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
HMGCS1Q01581 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.36□□□□□ -1.71
HMGCS1Q01581 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.36□□□□□ -1.71
HMGCS1Q01581 HSPE1P22-201ENST00000456856 327 ntBASIC4.36□□□□□ -1.71
HMGCS1Q01581 AC090013.1-201ENST00000485147 480 ntBASIC4.36□□□□□ -1.71
HMGCS1Q01581 AC011005.3-201ENST00000491624 395 ntBASIC4.36□□□□□ -1.71
HMGCS1Q01581 MTND4LP2-201ENST00000502312 285 ntBASIC4.36□□□□□ -1.71
HMGCS1Q01581 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.36□□□□□ -1.71
HMGCS1Q01581 OR5M2P-201ENST00000529003 936 ntBASIC4.36□□□□□ -1.71
HMGCS1Q01581 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
HMGCS1Q01581 AC008147.3-201ENST00000548666 354 ntBASIC4.36□□□□□ -1.71
HMGCS1Q01581 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.36□□□□□ -1.71
HMGCS1Q01581 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC4.36□□□□□ -1.71
HMGCS1Q01581 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC4.36□□□□□ -1.71
HMGCS1Q01581 AC091979.2-201ENST00000607514 214 ntBASIC4.36□□□□□ -1.71
HMGCS1Q01581 AP002360.3-201ENST00000607673 710 ntBASIC4.36□□□□□ -1.71
HMGCS1Q01581 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC4.36□□□□□ -1.71
HMGCS1Q01581 AC116651.1-201ENST00000609724 556 ntBASIC4.36□□□□□ -1.71
HMGCS1Q01581 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC4.36□□□□□ -1.71
HMGCS1Q01581 AC107027.3-201ENST00000565095 3473 ntBASIC4.36□□□□□ -1.71
HMGCS1Q01581 ZNF137P-201ENST00000456718 1920 ntBASIC4.36□□□□□ -1.71
HMGCS1Q01581 AC139769.1-204ENST00000472297 1931 ntBASIC4.36□□□□□ -1.71
HMGCS1Q01581 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
HMGCS1Q01581 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.36□□□□□ -1.71
HMGCS1Q01581 AC073429.2-201ENST00000569694 1444 ntBASIC4.36□□□□□ -1.71
HMGCS1Q01581 KARSP3-201ENST00000571212 1504 ntBASIC4.36□□□□□ -1.71
HMGCS1Q01581 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
HMGCS1Q01581 MFSD4BP1-201ENST00000513330 1552 ntBASIC4.36□□□□□ -1.71
HMGCS1Q01581 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.35□□□□□ -1.71
HMGCS1Q01581 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC4.35□□□□□ -1.71
HMGCS1Q01581 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
HMGCS1Q01581 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.35□□□□□ -1.71
HMGCS1Q01581 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
HMGCS1Q01581 SNORA71.2-201ENST00000364941 134 ntBASIC4.35□□□□□ -1.71
HMGCS1Q01581 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
HMGCS1Q01581 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
HMGCS1Q01581 CCL7-202ENST00000394627 696 ntTSL 3 BASIC4.35□□□□□ -1.71
HMGCS1Q01581 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
HMGCS1Q01581 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC4.35□□□□□ -1.71
HMGCS1Q01581 RPL23AP25-201ENST00000430973 463 ntBASIC4.35□□□□□ -1.71
HMGCS1Q01581 HMGB3P10-201ENST00000434734 572 ntBASIC4.35□□□□□ -1.71
HMGCS1Q01581 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.35□□□□□ -1.71
HMGCS1Q01581 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC4.35□□□□□ -1.71
HMGCS1Q01581 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.35□□□□□ -1.71
HMGCS1Q01581 MTND6P32-201ENST00000457611 483 ntBASIC4.35□□□□□ -1.71
HMGCS1Q01581 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC4.35□□□□□ -1.71
HMGCS1Q01581 RPL23AP65-201ENST00000475608 468 ntBASIC4.35□□□□□ -1.71
HMGCS1Q01581 RN7SL41P-201ENST00000476144 297 ntBASIC4.35□□□□□ -1.71
HMGCS1Q01581 IGLV2-34-201ENST00000490007 283 ntBASIC4.35□□□□□ -1.71
HMGCS1Q01581 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
HMGCS1Q01581 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC4.35□□□□□ -1.71
HMGCS1Q01581 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC4.35□□□□□ -1.71
HMGCS1Q01581 IGKV1-32-201ENST00000519290 311 ntBASIC4.35□□□□□ -1.71
HMGCS1Q01581 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC4.35□□□□□ -1.71
HMGCS1Q01581 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
HMGCS1Q01581 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC4.35□□□□□ -1.71
HMGCS1Q01581 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC4.35□□□□□ -1.71
HMGCS1Q01581 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
HMGCS1Q01581 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC4.35□□□□□ -1.71
HMGCS1Q01581 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC4.35□□□□□ -1.71
HMGCS1Q01581 CD24P2-201ENST00000565486 219 ntBASIC4.35□□□□□ -1.71
HMGCS1Q01581 AC010615.3-201ENST00000597319 394 ntBASIC4.35□□□□□ -1.71
HMGCS1Q01581 NF1P10-201ENST00000613227 742 ntBASIC4.35□□□□□ -1.71
HMGCS1Q01581 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
HMGCS1Q01581 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
HMGCS1Q01581 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC4.35□□□□□ -1.71
HMGCS1Q01581 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
HMGCS1Q01581 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
HMGCS1Q01581 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.35□□□□□ -1.71
HMGCS1Q01581 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
HMGCS1Q01581 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC4.35□□□□□ -1.71
HMGCS1Q01581 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
HMGCS1Q01581 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
HMGCS1Q01581 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
HMGCS1Q01581 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
HMGCS1Q01581 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.34□□□□□ -1.71
HMGCS1Q01581 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
HMGCS1Q01581 MAPK10-286ENST00000641208 8747 ntBASIC4.34□□□□□ -1.71
HMGCS1Q01581 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
HMGCS1Q01581 ADIG-201ENST00000373348 430 ntTSL 2 BASIC4.34□□□□□ -1.71
HMGCS1Q01581 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
HMGCS1Q01581 SNORA11B-201ENST00000408175 129 ntBASIC4.34□□□□□ -1.71
HMGCS1Q01581 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC4.34□□□□□ -1.71
HMGCS1Q01581 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC4.34□□□□□ -1.71
HMGCS1Q01581 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.34□□□□□ -1.71
HMGCS1Q01581 RAD23BP1-201ENST00000421404 1227 ntBASIC4.34□□□□□ -1.71
HMGCS1Q01581 RPS12P10-201ENST00000427031 377 ntBASIC4.34□□□□□ -1.71
HMGCS1Q01581 AL138787.1-202ENST00000437804 898 ntBASIC4.34□□□□□ -1.71
HMGCS1Q01581 NPM1P33-201ENST00000438918 872 ntBASIC4.34□□□□□ -1.71
HMGCS1Q01581 RPL23AP93-201ENST00000440847 484 ntBASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms