Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 AC090181.2-201ENST00000602975 672 ntBASIC5□□□□□ -1.61
TPM4P67936 Z98200.1-201ENST00000607298 470 ntBASIC5□□□□□ -1.61
TPM4P67936 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC5□□□□□ -1.61
TPM4P67936 MIR4727-201ENST00000622232 55 ntBASIC5□□□□□ -1.61
TPM4P67936 AC112694.2-201ENST00000623697 768 ntBASIC5□□□□□ -1.61
TPM4P67936 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC5□□□□□ -1.61
TPM4P67936 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC5□□□□□ -1.61
TPM4P67936 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC5□□□□□ -1.61
TPM4P67936 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC5□□□□□ -1.61
TPM4P67936 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC5□□□□□ -1.61
TPM4P67936 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
TPM4P67936 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
TPM4P67936 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC5□□□□□ -1.61
TPM4P67936 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
TPM4P67936 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
TPM4P67936 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC4.99□□□□□ -1.61
TPM4P67936 RNU4-4P-201ENST00000364588 130 ntBASIC4.99□□□□□ -1.61
TPM4P67936 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC4.99□□□□□ -1.61
TPM4P67936 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
TPM4P67936 RNA5SP39-201ENST00000411245 120 ntBASIC4.99□□□□□ -1.61
TPM4P67936 TRIM60P17-201ENST00000415181 719 ntBASIC4.99□□□□□ -1.61
TPM4P67936 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.99□□□□□ -1.61
TPM4P67936 RPS12P10-201ENST00000427031 377 ntBASIC4.99□□□□□ -1.61
TPM4P67936 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC4.99□□□□□ -1.61
TPM4P67936 AC007559.1-201ENST00000428736 355 ntBASIC4.99□□□□□ -1.61
TPM4P67936 NRBF2P3-201ENST00000432731 865 ntBASIC4.99□□□□□ -1.61
TPM4P67936 AC016831.4-201ENST00000438302 307 ntBASIC4.99□□□□□ -1.61
TPM4P67936 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC4.99□□□□□ -1.61
TPM4P67936 AC073850.1-201ENST00000449243 255 ntBASIC4.99□□□□□ -1.61
TPM4P67936 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC4.99□□□□□ -1.61
TPM4P67936 AC012671.1-201ENST00000451912 203 ntBASIC4.99□□□□□ -1.61
TPM4P67936 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC4.99□□□□□ -1.61
TPM4P67936 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC4.99□□□□□ -1.61
TPM4P67936 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC4.99□□□□□ -1.61
TPM4P67936 HNRNPKP5-201ENST00000515300 253 ntBASIC4.99□□□□□ -1.61
TPM4P67936 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC4.99□□□□□ -1.61
TPM4P67936 PHBP17-201ENST00000528576 541 ntBASIC4.99□□□□□ -1.61
TPM4P67936 MTND2P17-201ENST00000550281 688 ntBASIC4.99□□□□□ -1.61
TPM4P67936 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC4.99□□□□□ -1.61
TPM4P67936 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.99□□□□□ -1.61
TPM4P67936 MIR3691-201ENST00000578066 90 ntBASIC4.99□□□□□ -1.61
TPM4P67936 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC4.99□□□□□ -1.61
TPM4P67936 AL031666.3-201ENST00000609320 1006 ntBASIC4.99□□□□□ -1.61
TPM4P67936 AP002967.1-201ENST00000624203 539 ntBASIC4.99□□□□□ -1.61
TPM4P67936 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
TPM4P67936 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
TPM4P67936 LINC00622-201ENST00000562811 1570 ntBASIC4.99□□□□□ -1.61
TPM4P67936 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.98□□□□□ -1.61
TPM4P67936 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
TPM4P67936 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
TPM4P67936 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
TPM4P67936 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
TPM4P67936 HMGB3P10-201ENST00000434734 572 ntBASIC4.98□□□□□ -1.61
TPM4P67936 CYCSP11-201ENST00000436426 315 ntBASIC4.98□□□□□ -1.61
TPM4P67936 OR52J1P-201ENST00000450596 932 ntBASIC4.98□□□□□ -1.61
TPM4P67936 RPL7L1P4-201ENST00000513004 707 ntBASIC4.98□□□□□ -1.61
TPM4P67936 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC4.98□□□□□ -1.61
TPM4P67936 RNU2-30P-201ENST00000516209 141 ntBASIC4.98□□□□□ -1.61
TPM4P67936 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.98□□□□□ -1.61
TPM4P67936 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.98□□□□□ -1.61
TPM4P67936 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.98□□□□□ -1.61
TPM4P67936 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC4.98□□□□□ -1.61
TPM4P67936 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC4.98□□□□□ -1.61
TPM4P67936 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC4.98□□□□□ -1.61
TPM4P67936 AL450326.2-201ENST00000421913 1962 ntBASIC4.98□□□□□ -1.61
TPM4P67936 IQCB2P-201ENST00000401788 1633 ntBASIC4.97□□□□□ -1.61
TPM4P67936 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
TPM4P67936 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
TPM4P67936 AC125257.1-201ENST00000560400 2930 ntBASIC4.97□□□□□ -1.61
TPM4P67936 ARHGAP42P1-201ENST00000507474 1976 ntBASIC4.97□□□□□ -1.61
TPM4P67936 RNU1-106P-201ENST00000384382 164 ntBASIC4.97□□□□□ -1.61
TPM4P67936 AL391361.1-201ENST00000405580 489 ntBASIC4.97□□□□□ -1.61
TPM4P67936 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC4.97□□□□□ -1.61
TPM4P67936 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.97□□□□□ -1.61
TPM4P67936 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC4.97□□□□□ -1.61
TPM4P67936 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC4.97□□□□□ -1.61
TPM4P67936 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC4.97□□□□□ -1.61
TPM4P67936 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC4.97□□□□□ -1.61
TPM4P67936 IGHV3-63-201ENST00000518422 341 ntBASIC4.97□□□□□ -1.61
TPM4P67936 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC4.97□□□□□ -1.61
TPM4P67936 AP001804.2-201ENST00000533932 910 ntBASIC4.97□□□□□ -1.61
TPM4P67936 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.97□□□□□ -1.61
TPM4P67936 AL110118.1-201ENST00000553543 400 ntBASIC4.97□□□□□ -1.61
TPM4P67936 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC4.97□□□□□ -1.61
TPM4P67936 PSMA4-209ENST00000559082 1094 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
TPM4P67936 AC007225.2-201ENST00000562529 256 ntBASIC4.97□□□□□ -1.61
TPM4P67936 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
TPM4P67936 RPL23AP97-201ENST00000568955 471 ntBASIC4.97□□□□□ -1.61
TPM4P67936 AC087763.1-201ENST00000603391 286 ntBASIC4.97□□□□□ -1.61
TPM4P67936 AL160290.3-201ENST00000604869 165 ntBASIC4.97□□□□□ -1.61
TPM4P67936 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.97□□□□□ -1.61
TPM4P67936 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.97□□□□□ -1.61
TPM4P67936 AC131238.1-201ENST00000617135 328 ntBASIC4.97□□□□□ -1.61
TPM4P67936 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
TPM4P67936 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
TPM4P67936 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.97□□□□□ -1.61
TPM4P67936 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
TPM4P67936 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
TPM4P67936 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.97□□□□□ -1.61
TPM4P67936 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms