Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 AL513218.1-201ENST00000606527 391 ntBASIC5.7□□□□□ -1.5
GFRA1P56159 AL451049.1-201ENST00000608672 497 ntBASIC5.7□□□□□ -1.5
GFRA1P56159 AC103710.4-201ENST00000609301 899 ntBASIC5.7□□□□□ -1.5
GFRA1P56159 AC091834.1-201ENST00000614543 472 ntBASIC5.7□□□□□ -1.5
GFRA1P56159 AC116563.2-201ENST00000624751 535 ntBASIC5.7□□□□□ -1.5
GFRA1P56159 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC5.7□□□□□ -1.5
GFRA1P56159 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC5.7□□□□□ -1.5
GFRA1P56159 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC5.7□□□□□ -1.5
GFRA1P56159 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
GFRA1P56159 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
GFRA1P56159 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC5.7□□□□□ -1.5
GFRA1P56159 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC5.7□□□□□ -1.5
GFRA1P56159 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
GFRA1P56159 CYP2G2P-201ENST00000594920 1485 ntBASIC5.7□□□□□ -1.5
GFRA1P56159 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
GFRA1P56159 ZNF402P-201ENST00000404435 3100 ntBASIC5.7□□□□□ -1.5
GFRA1P56159 AL731556.1-201ENST00000394628 3711 ntBASIC5.7□□□□□ -1.5
GFRA1P56159 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
GFRA1P56159 AC022905.1-201ENST00000503430 3048 ntBASIC5.69□□□□□ -1.5
GFRA1P56159 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
GFRA1P56159 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.69□□□□□ -1.5
GFRA1P56159 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
GFRA1P56159 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
GFRA1P56159 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
GFRA1P56159 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
GFRA1P56159 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC5.69□□□□□ -1.5
GFRA1P56159 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
GFRA1P56159 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.69□□□□□ -1.5
GFRA1P56159 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
GFRA1P56159 AP000547.3-204ENST00000588548 2523 ntBASIC5.69□□□□□ -1.5
GFRA1P56159 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC5.69□□□□□ -1.5
GFRA1P56159 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
GFRA1P56159 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
GFRA1P56159 RNA5SP346-201ENST00000363541 121 ntBASIC5.69□□□□□ -1.5
GFRA1P56159 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
GFRA1P56159 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
GFRA1P56159 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
GFRA1P56159 RNU6-444P-201ENST00000383988 108 ntBASIC5.69□□□□□ -1.5
GFRA1P56159 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
GFRA1P56159 GAPDHP42-201ENST00000406848 981 ntBASIC5.69□□□□□ -1.5
GFRA1P56159 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC5.69□□□□□ -1.5
GFRA1P56159 HMGB3P23-201ENST00000414981 585 ntBASIC5.69□□□□□ -1.5
GFRA1P56159 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC5.69□□□□□ -1.5
GFRA1P56159 B3GALNT1P1-201ENST00000420569 975 ntBASIC5.69□□□□□ -1.5
GFRA1P56159 AKR1B10P1-201ENST00000425765 942 ntBASIC5.69□□□□□ -1.5
GFRA1P56159 RPS7P14-201ENST00000426405 583 ntBASIC5.69□□□□□ -1.5
GFRA1P56159 AL158073.1-201ENST00000426848 1104 ntBASIC5.69□□□□□ -1.5
GFRA1P56159 AC099796.1-201ENST00000433377 683 ntTSL 3 BASIC5.69□□□□□ -1.5
GFRA1P56159 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC5.69□□□□□ -1.5
GFRA1P56159 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC5.69□□□□□ -1.5
GFRA1P56159 RPL5P7-201ENST00000444235 813 ntBASIC5.69□□□□□ -1.5
GFRA1P56159 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC5.69□□□□□ -1.5
GFRA1P56159 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC5.69□□□□□ -1.5
GFRA1P56159 TRGVB-201ENST00000453257 471 ntBASIC5.69□□□□□ -1.5
GFRA1P56159 AC098824.1-201ENST00000453565 980 ntBASIC5.69□□□□□ -1.5
GFRA1P56159 snoU109.1-201ENST00000459339 135 ntBASIC5.69□□□□□ -1.5
GFRA1P56159 UCK2-205ENST00000469256 753 ntTSL 3 BASIC5.69□□□□□ -1.5
GFRA1P56159 LARP1BP2-201ENST00000486594 519 ntBASIC5.69□□□□□ -1.5
GFRA1P56159 AC105252.1-201ENST00000503089 286 ntBASIC5.69□□□□□ -1.5
GFRA1P56159 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
GFRA1P56159 PDLIM1P4-201ENST00000504327 1006 ntBASIC5.69□□□□□ -1.5
GFRA1P56159 OR7E99P-201ENST00000505750 922 ntBASIC5.69□□□□□ -1.5
GFRA1P56159 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC5.69□□□□□ -1.5
GFRA1P56159 AC026412.2-201ENST00000512270 1075 ntBASIC5.69□□□□□ -1.5
GFRA1P56159 AF131216.2-201ENST00000512316 564 ntBASIC5.69□□□□□ -1.5
GFRA1P56159 AC008549.1-201ENST00000512900 643 ntBASIC5.69□□□□□ -1.5
GFRA1P56159 RNU6-718P-201ENST00000516166 105 ntBASIC5.69□□□□□ -1.5
GFRA1P56159 RNU6-150P-201ENST00000516237 95 ntBASIC5.69□□□□□ -1.5
GFRA1P56159 RNU6-314P-201ENST00000516574 104 ntBASIC5.69□□□□□ -1.5
GFRA1P56159 RN7SKP70-201ENST00000516655 271 ntBASIC5.69□□□□□ -1.5
GFRA1P56159 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC5.69□□□□□ -1.5
GFRA1P56159 AC008429.4-201ENST00000521201 182 ntBASIC5.69□□□□□ -1.5
GFRA1P56159 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
GFRA1P56159 EIF4A2P5-201ENST00000529914 499 ntBASIC5.69□□□□□ -1.5
GFRA1P56159 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC5.69□□□□□ -1.5
GFRA1P56159 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC5.69□□□□□ -1.5
GFRA1P56159 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
GFRA1P56159 AC073916.1-201ENST00000545095 130 ntBASIC5.69□□□□□ -1.5
GFRA1P56159 AC027667.1-201ENST00000545814 304 ntBASIC5.69□□□□□ -1.5
GFRA1P56159 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC5.69□□□□□ -1.5
GFRA1P56159 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC5.69□□□□□ -1.5
GFRA1P56159 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC5.69□□□□□ -1.5
GFRA1P56159 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
GFRA1P56159 RPS3AP4-201ENST00000555161 764 ntBASIC5.69□□□□□ -1.5
GFRA1P56159 AL845552.1-201ENST00000556820 323 ntBASIC5.69□□□□□ -1.5
GFRA1P56159 AC009120.3-201ENST00000563335 499 ntBASIC5.69□□□□□ -1.5
GFRA1P56159 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
GFRA1P56159 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC5.69□□□□□ -1.5
GFRA1P56159 MIR548S-201ENST00000581352 82 ntBASIC5.69□□□□□ -1.5
GFRA1P56159 AC233702.7-202ENST00000582941 211 ntBASIC5.69□□□□□ -1.5
GFRA1P56159 MIR4701-201ENST00000583094 63 ntBASIC5.69□□□□□ -1.5
GFRA1P56159 BNIP3P8-201ENST00000597863 560 ntBASIC5.69□□□□□ -1.5
GFRA1P56159 AC008687.2-201ENST00000597865 520 ntBASIC5.69□□□□□ -1.5
GFRA1P56159 BNIP3P23-201ENST00000599655 511 ntBASIC5.69□□□□□ -1.5
GFRA1P56159 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC5.69□□□□□ -1.5
GFRA1P56159 AC124916.2-201ENST00000604416 224 ntBASIC5.69□□□□□ -1.5
GFRA1P56159 CYCSP1-201ENST00000604815 315 ntBASIC5.69□□□□□ -1.5
GFRA1P56159 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC5.69□□□□□ -1.5
GFRA1P56159 AC131902.3-201ENST00000611767 581 ntBASIC5.69□□□□□ -1.5
GFRA1P56159 AC243654.2-201ENST00000612843 443 ntBASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms