Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.97□□□□□ -1.61
CLCNKAP51800 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC4.97□□□□□ -1.61
CLCNKAP51800 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.97□□□□□ -1.61
CLCNKAP51800 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CLCNKAP51800 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
CLCNKAP51800 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CLCNKAP51800 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CLCNKAP51800 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
CLCNKAP51800 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC4.96□□□□□ -1.61
CLCNKAP51800 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
CLCNKAP51800 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
CLCNKAP51800 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.96□□□□□ -1.61
CLCNKAP51800 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.96□□□□□ -1.61
CLCNKAP51800 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
CLCNKAP51800 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
CLCNKAP51800 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
CLCNKAP51800 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
CLCNKAP51800 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
CLCNKAP51800 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
CLCNKAP51800 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CLCNKAP51800 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CLCNKAP51800 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CLCNKAP51800 RPL22P22-201ENST00000395439 379 ntBASIC4.96□□□□□ -1.62
CLCNKAP51800 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CLCNKAP51800 AP002530.1-201ENST00000405705 684 ntBASIC4.96□□□□□ -1.62
CLCNKAP51800 RPS26P13-201ENST00000419030 330 ntBASIC4.96□□□□□ -1.62
CLCNKAP51800 OR6K4P-201ENST00000423179 955 ntBASIC4.96□□□□□ -1.62
CLCNKAP51800 AC073310.1-201ENST00000423226 1033 ntBASIC4.96□□□□□ -1.62
CLCNKAP51800 RPL23AP4-201ENST00000427757 463 ntBASIC4.96□□□□□ -1.62
CLCNKAP51800 AL160175.1-201ENST00000428124 247 ntBASIC4.96□□□□□ -1.62
CLCNKAP51800 RHOT1P3-201ENST00000436571 331 ntBASIC4.96□□□□□ -1.62
CLCNKAP51800 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC4.96□□□□□ -1.62
CLCNKAP51800 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC4.96□□□□□ -1.62
CLCNKAP51800 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC4.96□□□□□ -1.62
CLCNKAP51800 AC012512.1-201ENST00000446594 718 ntBASIC4.96□□□□□ -1.62
CLCNKAP51800 AC004980.3-201ENST00000447046 365 ntBASIC4.96□□□□□ -1.62
CLCNKAP51800 OR52E3P-201ENST00000452083 936 ntBASIC4.96□□□□□ -1.62
CLCNKAP51800 AC069277.2-201ENST00000454211 432 ntBASIC4.96□□□□□ -1.62
CLCNKAP51800 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CLCNKAP51800 CYCSP20-201ENST00000473154 315 ntBASIC4.96□□□□□ -1.62
CLCNKAP51800 SYT14P1-201ENST00000481459 721 ntBASIC4.96□□□□□ -1.62
CLCNKAP51800 AC108729.1-201ENST00000487812 947 ntBASIC4.96□□□□□ -1.62
CLCNKAP51800 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC4.96□□□□□ -1.62
CLCNKAP51800 BTG4P1-201ENST00000510421 183 ntBASIC4.96□□□□□ -1.62
CLCNKAP51800 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC4.96□□□□□ -1.62
CLCNKAP51800 AC110775.1-201ENST00000513721 462 ntBASIC4.96□□□□□ -1.62
CLCNKAP51800 RNA5SP43-201ENST00000516559 110 ntBASIC4.96□□□□□ -1.62
CLCNKAP51800 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC4.96□□□□□ -1.62
CLCNKAP51800 AP001922.4-201ENST00000526967 290 ntBASIC4.96□□□□□ -1.62
CLCNKAP51800 AP003066.2-201ENST00000529375 555 ntBASIC4.96□□□□□ -1.62
CLCNKAP51800 AGGF1P9-201ENST00000561884 913 ntBASIC4.96□□□□□ -1.62
CLCNKAP51800 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
CLCNKAP51800 PRPF19P1-201ENST00000584766 898 ntBASIC4.96□□□□□ -1.62
CLCNKAP51800 EIF1P5-201ENST00000585002 234 ntBASIC4.96□□□□□ -1.62
CLCNKAP51800 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC4.96□□□□□ -1.62
CLCNKAP51800 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC4.96□□□□□ -1.62
CLCNKAP51800 SNX6P1-201ENST00000601728 1224 ntBASIC4.96□□□□□ -1.62
CLCNKAP51800 AC091057.3-201ENST00000602684 733 ntBASIC4.96□□□□□ -1.62
CLCNKAP51800 AC008536.1-201ENST00000602872 669 ntBASIC4.96□□□□□ -1.62
CLCNKAP51800 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC4.96□□□□□ -1.62
CLCNKAP51800 AC008759.3-201ENST00000613300 508 ntBASIC4.96□□□□□ -1.62
CLCNKAP51800 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC4.96□□□□□ -1.62
CLCNKAP51800 METTL8-218ENST00000638989 876 ntTSL 5 BASIC4.96□□□□□ -1.62
CLCNKAP51800 METTL8-219ENST00000640734 726 ntTSL 2 BASIC4.96□□□□□ -1.62
CLCNKAP51800 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC4.96□□□□□ -1.62
CLCNKAP51800 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
CLCNKAP51800 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
CLCNKAP51800 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
CLCNKAP51800 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CLCNKAP51800 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.96□□□□□ -1.62
CLCNKAP51800 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.96□□□□□ -1.62
CLCNKAP51800 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC4.96□□□□□ -1.62
CLCNKAP51800 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC4.96□□□□□ -1.62
CLCNKAP51800 SMG1P6-201ENST00000532337 2930 ntBASIC4.96□□□□□ -1.62
CLCNKAP51800 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CLCNKAP51800 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC4.96□□□□□ -1.62
CLCNKAP51800 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CLCNKAP51800 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CLCNKAP51800 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CLCNKAP51800 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CLCNKAP51800 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CLCNKAP51800 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
CLCNKAP51800 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC4.95□□□□□ -1.62
CLCNKAP51800 RMST-202ENST00000541282 2099 ntTSL 2 BASIC4.95□□□□□ -1.62
CLCNKAP51800 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CLCNKAP51800 RNA5SP123-201ENST00000363244 119 ntBASIC4.95□□□□□ -1.62
CLCNKAP51800 AC007618.1-201ENST00000366455 732 ntBASIC4.95□□□□□ -1.62
CLCNKAP51800 RNU6-1005P-201ENST00000384519 107 ntBASIC4.95□□□□□ -1.62
CLCNKAP51800 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
CLCNKAP51800 ATP5HP3-201ENST00000396994 486 ntBASIC4.95□□□□□ -1.62
CLCNKAP51800 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CLCNKAP51800 AL158825.1-201ENST00000414735 521 ntBASIC4.95□□□□□ -1.62
CLCNKAP51800 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC4.95□□□□□ -1.62
CLCNKAP51800 FO393414.1-201ENST00000428697 1184 ntBASIC4.95□□□□□ -1.62
CLCNKAP51800 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC4.95□□□□□ -1.62
CLCNKAP51800 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.95□□□□□ -1.62
CLCNKAP51800 TRBV26OR9-2-201ENST00000432077 293 ntBASIC4.95□□□□□ -1.62
CLCNKAP51800 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC4.95□□□□□ -1.62
CLCNKAP51800 AC006994.1-201ENST00000438212 839 ntBASIC4.95□□□□□ -1.62
CLCNKAP51800 PA2G4P6-201ENST00000438325 1197 ntBASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms