Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC6.32□□□□□ -1.4
MRE11P49959 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
MRE11P49959 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
MRE11P49959 AP002784.2-201ENST00000397300 549 ntBASIC6.32□□□□□ -1.4
MRE11P49959 AL356968.2-201ENST00000412769 1257 ntBASIC6.32□□□□□ -1.4
MRE11P49959 MFSD13B-201ENST00000420133 1290 ntBASIC6.32□□□□□ -1.4
MRE11P49959 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
MRE11P49959 BX284632.2-201ENST00000421091 399 ntBASIC6.32□□□□□ -1.4
MRE11P49959 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC6.32□□□□□ -1.4
MRE11P49959 DEFB130D-201ENST00000426866 237 ntBASIC6.32□□□□□ -1.4
MRE11P49959 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC6.32□□□□□ -1.4
MRE11P49959 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC6.32□□□□□ -1.4
MRE11P49959 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC6.32□□□□□ -1.4
MRE11P49959 TRIM60P16-201ENST00000444048 694 ntBASIC6.32□□□□□ -1.4
MRE11P49959 AC069540.1-201ENST00000446320 988 ntBASIC6.32□□□□□ -1.4
MRE11P49959 AC092685.1-201ENST00000447960 1243 ntBASIC6.32□□□□□ -1.4
MRE11P49959 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC6.32□□□□□ -1.4
MRE11P49959 AC011225.1-201ENST00000457751 369 ntBASIC6.32□□□□□ -1.4
MRE11P49959 RPS29P22-201ENST00000472363 168 ntBASIC6.32□□□□□ -1.4
MRE11P49959 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
MRE11P49959 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC6.32□□□□□ -1.4
MRE11P49959 OR2A20P-203ENST00000498397 1268 ntBASIC6.32□□□□□ -1.4
MRE11P49959 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC6.32□□□□□ -1.4
MRE11P49959 SLC25A15P5-201ENST00000508033 253 ntBASIC6.32□□□□□ -1.4
MRE11P49959 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC6.32□□□□□ -1.4
MRE11P49959 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC6.32□□□□□ -1.4
MRE11P49959 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC6.32□□□□□ -1.4
MRE11P49959 AP000648.1-201ENST00000529682 397 ntBASIC6.32□□□□□ -1.4
MRE11P49959 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
MRE11P49959 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC6.32□□□□□ -1.4
MRE11P49959 AP001094.1-201ENST00000579805 193 ntBASIC6.32□□□□□ -1.4
MRE11P49959 AC233702.9-201ENST00000581528 203 ntBASIC6.32□□□□□ -1.4
MRE11P49959 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC6.32□□□□□ -1.4
MRE11P49959 BNIP3P22-201ENST00000593399 556 ntBASIC6.32□□□□□ -1.4
MRE11P49959 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC6.32□□□□□ -1.4
MRE11P49959 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC6.32□□□□□ -1.4
MRE11P49959 AL031601.1-201ENST00000605702 394 ntBASIC6.32□□□□□ -1.4
MRE11P49959 AC092106.3-201ENST00000611308 722 ntBASIC6.32□□□□□ -1.4
MRE11P49959 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC6.32□□□□□ -1.4
MRE11P49959 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
MRE11P49959 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
MRE11P49959 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC6.32□□□□□ -1.4
MRE11P49959 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC6.32□□□□□ -1.4
MRE11P49959 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
MRE11P49959 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
MRE11P49959 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC6.32□□□□□ -1.4
MRE11P49959 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC6.32□□□□□ -1.4
MRE11P49959 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
MRE11P49959 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC6.32□□□□□ -1.4
MRE11P49959 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC6.31□□□□□ -1.4
MRE11P49959 AF287957.1-201ENST00000607368 1595 ntBASIC6.31□□□□□ -1.4
MRE11P49959 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
MRE11P49959 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
MRE11P49959 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
MRE11P49959 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
MRE11P49959 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
MRE11P49959 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
MRE11P49959 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
MRE11P49959 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
MRE11P49959 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC6.31□□□□□ -1.4
MRE11P49959 MIR375-201ENST00000362103 64 ntBASIC6.31□□□□□ -1.4
MRE11P49959 RNU1-150P-201ENST00000362491 162 ntBASIC6.31□□□□□ -1.4
MRE11P49959 RNU1-134P-201ENST00000362935 165 ntBASIC6.31□□□□□ -1.4
MRE11P49959 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
MRE11P49959 AL603865.2-201ENST00000401679 213 ntBASIC6.31□□□□□ -1.4
MRE11P49959 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
MRE11P49959 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC6.31□□□□□ -1.4
MRE11P49959 AC007738.1-201ENST00000413892 348 ntBASIC6.31□□□□□ -1.4
MRE11P49959 MRPL53P1-201ENST00000414323 319 ntBASIC6.31□□□□□ -1.4
MRE11P49959 RPL26P29-201ENST00000415623 438 ntBASIC6.31□□□□□ -1.4
MRE11P49959 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC6.31□□□□□ -1.4
MRE11P49959 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC6.31□□□□□ -1.4
MRE11P49959 AL139148.1-201ENST00000427122 680 ntBASIC6.31□□□□□ -1.4
MRE11P49959 AC084290.1-201ENST00000434995 374 ntBASIC6.31□□□□□ -1.4
MRE11P49959 AC006466.1-201ENST00000438721 289 ntBASIC6.31□□□□□ -1.4
MRE11P49959 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC6.31□□□□□ -1.4
MRE11P49959 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC6.31□□□□□ -1.4
MRE11P49959 AC073648.4-201ENST00000442655 781 ntBASIC6.31□□□□□ -1.4
MRE11P49959 MTCO2P7-201ENST00000446518 666 ntBASIC6.31□□□□□ -1.4
MRE11P49959 FTLP8-201ENST00000446770 267 ntBASIC6.31□□□□□ -1.4
MRE11P49959 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC6.31□□□□□ -1.4
MRE11P49959 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC6.31□□□□□ -1.4
MRE11P49959 AC092691.2-201ENST00000461787 803 ntBASIC6.31□□□□□ -1.4
MRE11P49959 SYT14P1-201ENST00000481459 721 ntBASIC6.31□□□□□ -1.4
MRE11P49959 AC126121.1-201ENST00000482313 553 ntBASIC6.31□□□□□ -1.4
MRE11P49959 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC6.31□□□□□ -1.4
MRE11P49959 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC6.31□□□□□ -1.4
MRE11P49959 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC6.31□□□□□ -1.4
MRE11P49959 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
MRE11P49959 LRRC6P1-201ENST00000532188 885 ntBASIC6.31□□□□□ -1.4
MRE11P49959 OR8G3P-201ENST00000533406 921 ntBASIC6.31□□□□□ -1.4
MRE11P49959 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC6.31□□□□□ -1.4
MRE11P49959 NDUFAF4P1-201ENST00000559425 519 ntBASIC6.31□□□□□ -1.4
MRE11P49959 CASC22-201ENST00000569713 386 ntTSL 5 BASIC6.31□□□□□ -1.4
MRE11P49959 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC6.31□□□□□ -1.4
MRE11P49959 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC6.31□□□□□ -1.4
MRE11P49959 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC6.31□□□□□ -1.4
MRE11P49959 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC6.31□□□□□ -1.4
MRE11P49959 AC079610.2-201ENST00000604818 690 ntBASIC6.31□□□□□ -1.4
MRE11P49959 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC6.31□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms