Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.13□□□□□ -1.75
CX3CR1P49238 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.13□□□□□ -1.75
CX3CR1P49238 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
CX3CR1P49238 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
CX3CR1P49238 RNA5SP123-201ENST00000363244 119 ntBASIC4.13□□□□□ -1.75
CX3CR1P49238 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CX3CR1P49238 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CX3CR1P49238 HDGFP1-201ENST00000405943 252 ntBASIC4.13□□□□□ -1.75
CX3CR1P49238 AL139039.2-201ENST00000407436 479 ntBASIC4.13□□□□□ -1.75
CX3CR1P49238 RNU4-34P-201ENST00000410431 124 ntBASIC4.13□□□□□ -1.75
CX3CR1P49238 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC4.13□□□□□ -1.75
CX3CR1P49238 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CX3CR1P49238 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.13□□□□□ -1.75
CX3CR1P49238 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC4.13□□□□□ -1.75
CX3CR1P49238 PDSS1P1-201ENST00000422953 1114 ntBASIC4.13□□□□□ -1.75
CX3CR1P49238 GTF2IP2-201ENST00000424290 697 ntBASIC4.13□□□□□ -1.75
CX3CR1P49238 AL355994.1-201ENST00000424379 260 ntBASIC4.13□□□□□ -1.75
CX3CR1P49238 Z85994.2-201ENST00000434327 452 ntBASIC4.13□□□□□ -1.75
CX3CR1P49238 RPS20P1-201ENST00000434853 354 ntBASIC4.13□□□□□ -1.75
CX3CR1P49238 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.13□□□□□ -1.75
CX3CR1P49238 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC4.13□□□□□ -1.75
CX3CR1P49238 TXNP2-201ENST00000443918 295 ntBASIC4.13□□□□□ -1.75
CX3CR1P49238 CEACAMP7-201ENST00000444105 496 ntBASIC4.13□□□□□ -1.75
CX3CR1P49238 VN1R48P-201ENST00000448149 1036 ntBASIC4.13□□□□□ -1.75
CX3CR1P49238 AURKAPS2-201ENST00000454983 333 ntBASIC4.13□□□□□ -1.75
CX3CR1P49238 RN7SL41P-201ENST00000476144 297 ntBASIC4.13□□□□□ -1.75
CX3CR1P49238 AC004815.1-201ENST00000484185 331 ntBASIC4.13□□□□□ -1.75
CX3CR1P49238 UBA52P3-201ENST00000491303 382 ntBASIC4.13□□□□□ -1.75
CX3CR1P49238 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC4.13□□□□□ -1.75
CX3CR1P49238 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CX3CR1P49238 GAPDHP56-201ENST00000506031 988 ntBASIC4.13□□□□□ -1.75
CX3CR1P49238 AC091868.1-201ENST00000508746 304 ntBASIC4.13□□□□□ -1.75
CX3CR1P49238 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC4.13□□□□□ -1.75
CX3CR1P49238 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CX3CR1P49238 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC4.13□□□□□ -1.75
CX3CR1P49238 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC4.13□□□□□ -1.75
CX3CR1P49238 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC4.13□□□□□ -1.75
CX3CR1P49238 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.13□□□□□ -1.75
CX3CR1P49238 HMGN2P6-201ENST00000551091 273 ntBASIC4.13□□□□□ -1.75
CX3CR1P49238 AC011487.3-201ENST00000593607 453 ntBASIC4.13□□□□□ -1.75
CX3CR1P49238 AC068020.1-201ENST00000594215 661 ntBASIC4.13□□□□□ -1.75
CX3CR1P49238 AC130352.1-201ENST00000602979 661 ntBASIC4.13□□□□□ -1.75
CX3CR1P49238 AC073137.1-201ENST00000605636 634 ntBASIC4.13□□□□□ -1.75
CX3CR1P49238 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC4.13□□□□□ -1.75
CX3CR1P49238 AL008729.2-201ENST00000606393 473 ntBASIC4.13□□□□□ -1.75
CX3CR1P49238 AC091979.2-201ENST00000607514 214 ntBASIC4.13□□□□□ -1.75
CX3CR1P49238 OR7A19P-201ENST00000608051 733 ntBASIC4.13□□□□□ -1.75
CX3CR1P49238 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC4.13□□□□□ -1.75
CX3CR1P49238 AL512624.1-201ENST00000613638 469 ntBASIC4.13□□□□□ -1.75
CX3CR1P49238 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC4.13□□□□□ -1.75
CX3CR1P49238 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.13□□□□□ -1.75
CX3CR1P49238 AC055839.1-201ENST00000634467 498 ntBASIC4.13□□□□□ -1.75
CX3CR1P49238 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CX3CR1P49238 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.13□□□□□ -1.75
CX3CR1P49238 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CX3CR1P49238 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.13□□□□□ -1.75
CX3CR1P49238 Z95327.2-201ENST00000414579 1873 ntBASIC4.13□□□□□ -1.75
CX3CR1P49238 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CX3CR1P49238 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CX3CR1P49238 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.13□□□□□ -1.75
CX3CR1P49238 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
CX3CR1P49238 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CX3CR1P49238 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.12□□□□□ -1.75
CX3CR1P49238 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CX3CR1P49238 DDX18P3-201ENST00000404856 2007 ntBASIC4.12□□□□□ -1.75
CX3CR1P49238 AC007382.1-201ENST00000624376 2618 ntBASIC4.12□□□□□ -1.75
CX3CR1P49238 SPATA2P1-201ENST00000431223 2055 ntBASIC4.12□□□□□ -1.75
CX3CR1P49238 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CX3CR1P49238 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.12□□□□□ -1.75
CX3CR1P49238 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
CX3CR1P49238 MAPK10-263ENST00000641052 4307 ntBASIC4.12□□□□□ -1.75
CX3CR1P49238 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CX3CR1P49238 AL442639.1-201ENST00000625030 1899 ntBASIC4.12□□□□□ -1.75
CX3CR1P49238 INTS6P1-201ENST00000504674 2530 ntBASIC4.12□□□□□ -1.75
CX3CR1P49238 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
CX3CR1P49238 RNU1-20P-201ENST00000363314 162 ntBASIC4.12□□□□□ -1.75
CX3CR1P49238 AC019155.1-201ENST00000382242 574 ntBASIC4.12□□□□□ -1.75
CX3CR1P49238 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
CX3CR1P49238 AL590762.2-201ENST00000395798 571 ntBASIC4.12□□□□□ -1.75
CX3CR1P49238 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC4.12□□□□□ -1.75
CX3CR1P49238 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC4.12□□□□□ -1.75
CX3CR1P49238 AC048351.1-201ENST00000420064 602 ntBASIC4.12□□□□□ -1.75
CX3CR1P49238 AL645608.4-201ENST00000423619 154 ntBASIC4.12□□□□□ -1.75
CX3CR1P49238 AL158073.1-201ENST00000426848 1104 ntBASIC4.12□□□□□ -1.75
CX3CR1P49238 MTCO3P21-201ENST00000430791 643 ntBASIC4.12□□□□□ -1.75
CX3CR1P49238 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC4.12□□□□□ -1.75
CX3CR1P49238 RPL12P46-201ENST00000436610 195 ntBASIC4.12□□□□□ -1.75
CX3CR1P49238 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC4.12□□□□□ -1.75
CX3CR1P49238 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.12□□□□□ -1.75
CX3CR1P49238 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC4.12□□□□□ -1.75
CX3CR1P49238 EIF4A2P4-201ENST00000458691 1196 ntBASIC4.12□□□□□ -1.75
CX3CR1P49238 RPL23AP65-201ENST00000475608 468 ntBASIC4.12□□□□□ -1.75
CX3CR1P49238 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC4.12□□□□□ -1.75
CX3CR1P49238 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CX3CR1P49238 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CX3CR1P49238 AC093763.2-201ENST00000505334 1223 ntBASIC4.12□□□□□ -1.75
CX3CR1P49238 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC4.12□□□□□ -1.75
CX3CR1P49238 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC4.12□□□□□ -1.75
CX3CR1P49238 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC4.12□□□□□ -1.75
CX3CR1P49238 BTF3P13-201ENST00000513224 490 ntBASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms