Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 AL445183.3-201ENST00000414168 502 ntBASIC5.23□□□□□ -1.57
PTPN9P43378 OR13Z1P-201ENST00000416141 834 ntBASIC5.23□□□□□ -1.57
PTPN9P43378 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.23□□□□□ -1.57
PTPN9P43378 OR6K4P-201ENST00000423179 955 ntBASIC5.23□□□□□ -1.57
PTPN9P43378 MTCO2P17-201ENST00000424336 677 ntBASIC5.23□□□□□ -1.57
PTPN9P43378 IGKV1OR9-1-201ENST00000424370 284 ntBASIC5.23□□□□□ -1.57
PTPN9P43378 DEFB130D-201ENST00000426866 237 ntBASIC5.23□□□□□ -1.57
PTPN9P43378 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC5.23□□□□□ -1.57
PTPN9P43378 Z80107.1-201ENST00000436830 412 ntBASIC5.23□□□□□ -1.57
PTPN9P43378 RRM2P4-201ENST00000441721 562 ntBASIC5.23□□□□□ -1.57
PTPN9P43378 AC092685.1-201ENST00000447960 1243 ntBASIC5.23□□□□□ -1.57
PTPN9P43378 AL691482.1-201ENST00000453255 87 ntBASIC5.23□□□□□ -1.57
PTPN9P43378 PSMC1P13-201ENST00000458195 985 ntBASIC5.23□□□□□ -1.57
PTPN9P43378 AC104164.3-201ENST00000467363 1258 ntBASIC5.23□□□□□ -1.57
PTPN9P43378 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC5.23□□□□□ -1.57
PTPN9P43378 HMGB1P38-201ENST00000490557 577 ntBASIC5.23□□□□□ -1.57
PTPN9P43378 AC109462.1-201ENST00000491087 368 ntBASIC5.23□□□□□ -1.57
PTPN9P43378 RN7SL244P-201ENST00000493405 297 ntBASIC5.23□□□□□ -1.57
PTPN9P43378 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC5.23□□□□□ -1.57
PTPN9P43378 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC5.23□□□□□ -1.57
PTPN9P43378 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC5.23□□□□□ -1.57
PTPN9P43378 MTND2P32-201ENST00000521584 1038 ntBASIC5.23□□□□□ -1.57
PTPN9P43378 LECT2-205ENST00000522943 574 ntTSL 3 BASIC5.23□□□□□ -1.57
PTPN9P43378 AP003717.3-201ENST00000544832 1180 ntBASIC5.23□□□□□ -1.57
PTPN9P43378 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC5.23□□□□□ -1.57
PTPN9P43378 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC5.23□□□□□ -1.57
PTPN9P43378 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC5.23□□□□□ -1.57
PTPN9P43378 AC069431.2-201ENST00000604149 1099 ntBASIC5.23□□□□□ -1.57
PTPN9P43378 SAMMSON-227ENST00000642114 1199 ntBASIC5.23□□□□□ -1.57
PTPN9P43378 TTC39DP-201ENST00000416781 1688 ntBASIC5.23□□□□□ -1.57
PTPN9P43378 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
PTPN9P43378 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.23□□□□□ -1.57
PTPN9P43378 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
PTPN9P43378 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC5.23□□□□□ -1.57
PTPN9P43378 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.23□□□□□ -1.57
PTPN9P43378 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.23□□□□□ -1.57
PTPN9P43378 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.23□□□□□ -1.57
PTPN9P43378 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.23□□□□□ -1.57
PTPN9P43378 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
PTPN9P43378 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.22□□□□□ -1.57
PTPN9P43378 C4BPAP1-201ENST00000415474 1893 ntBASIC5.22□□□□□ -1.57
PTPN9P43378 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC5.22□□□□□ -1.57
PTPN9P43378 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
PTPN9P43378 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
PTPN9P43378 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
PTPN9P43378 RNU6-1005P-201ENST00000384519 107 ntBASIC5.22□□□□□ -1.57
PTPN9P43378 HMGB3P7-201ENST00000400214 611 ntBASIC5.22□□□□□ -1.57
PTPN9P43378 AL078599.1-201ENST00000402075 293 ntBASIC5.22□□□□□ -1.57
PTPN9P43378 MIR1178-201ENST00000408396 91 ntBASIC5.22□□□□□ -1.57
PTPN9P43378 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC5.22□□□□□ -1.57
PTPN9P43378 AC013429.2-201ENST00000418798 781 ntBASIC5.22□□□□□ -1.57
PTPN9P43378 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
PTPN9P43378 AC073310.1-201ENST00000423226 1033 ntBASIC5.22□□□□□ -1.57
PTPN9P43378 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC5.22□□□□□ -1.57
PTPN9P43378 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC5.22□□□□□ -1.57
PTPN9P43378 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC5.22□□□□□ -1.57
PTPN9P43378 RHOT1P3-201ENST00000436571 331 ntBASIC5.22□□□□□ -1.57
PTPN9P43378 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.22□□□□□ -1.57
PTPN9P43378 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC5.22□□□□□ -1.57
PTPN9P43378 RN7SL591P-201ENST00000496150 292 ntBASIC5.22□□□□□ -1.57
PTPN9P43378 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC5.22□□□□□ -1.57
PTPN9P43378 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC5.22□□□□□ -1.57
PTPN9P43378 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC5.22□□□□□ -1.57
PTPN9P43378 AL671862.1-201ENST00000515851 349 ntBASIC5.22□□□□□ -1.57
PTPN9P43378 RNU6-1004P-201ENST00000516584 111 ntBASIC5.22□□□□□ -1.57
PTPN9P43378 OR7E13P-201ENST00000526052 910 ntBASIC5.22□□□□□ -1.57
PTPN9P43378 MIR3691-201ENST00000578066 90 ntBASIC5.22□□□□□ -1.57
PTPN9P43378 MIR4691-201ENST00000583764 85 ntBASIC5.22□□□□□ -1.57
PTPN9P43378 AL049844.2-201ENST00000604280 628 ntBASIC5.22□□□□□ -1.57
PTPN9P43378 AC018618.2-201ENST00000604770 446 ntBASIC5.22□□□□□ -1.57
PTPN9P43378 AL121652.1-201ENST00000608851 448 ntBASIC5.22□□□□□ -1.57
PTPN9P43378 AC093799.2-201ENST00000610062 578 ntBASIC5.22□□□□□ -1.57
PTPN9P43378 AC009163.6-201ENST00000612367 342 ntBASIC5.22□□□□□ -1.57
PTPN9P43378 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC5.22□□□□□ -1.57
PTPN9P43378 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC5.22□□□□□ -1.57
PTPN9P43378 RNF123-214ENST00000629802 207 ntTSL 5 BASIC5.22□□□□□ -1.57
PTPN9P43378 AC008993.2-201ENST00000631744 806 ntBASIC5.22□□□□□ -1.57
PTPN9P43378 AL590396.4-201ENST00000636779 956 ntBASIC5.22□□□□□ -1.57
PTPN9P43378 AC119674.1-212ENST00000641155 993 ntBASIC5.22□□□□□ -1.57
PTPN9P43378 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
PTPN9P43378 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
PTPN9P43378 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5.22□□□□□ -1.57
PTPN9P43378 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC5.22□□□□□ -1.57
PTPN9P43378 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
PTPN9P43378 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
PTPN9P43378 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
PTPN9P43378 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
PTPN9P43378 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
PTPN9P43378 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.21□□□□□ -1.57
PTPN9P43378 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC5.21□□□□□ -1.57
PTPN9P43378 ECM1P2-201ENST00000503354 1577 ntBASIC5.21□□□□□ -1.57
PTPN9P43378 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC5.21□□□□□ -1.57
PTPN9P43378 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
PTPN9P43378 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.21□□□□□ -1.58
PTPN9P43378 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
PTPN9P43378 AC112198.2-201ENST00000426589 6996 ntBASIC5.21□□□□□ -1.58
PTPN9P43378 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.21□□□□□ -1.58
PTPN9P43378 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC5.21□□□□□ -1.58
PTPN9P43378 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
PTPN9P43378 SNORA73.1-201ENST00000363107 205 ntBASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms