Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
HOXD13P35453 SOCS5P3-201ENST00000425115 1576 ntBASIC5.31□□□□□ -1.56
HOXD13P35453 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
HOXD13P35453 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
HOXD13P35453 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
HOXD13P35453 AMELX-201ENST00000348912 737 ntTSL 5 BASIC5.31□□□□□ -1.56
HOXD13P35453 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
HOXD13P35453 RNA5SP191-201ENST00000362585 102 ntBASIC5.31□□□□□ -1.56
HOXD13P35453 RNU6-252P-201ENST00000363232 107 ntBASIC5.31□□□□□ -1.56
HOXD13P35453 RNU6-792P-201ENST00000363490 107 ntBASIC5.31□□□□□ -1.56
HOXD13P35453 RNU6-178P-201ENST00000384631 104 ntBASIC5.31□□□□□ -1.56
HOXD13P35453 AC093719.1-202ENST00000392735 373 ntBASIC5.31□□□□□ -1.56
HOXD13P35453 AC004074.1-201ENST00000421810 1063 ntBASIC5.31□□□□□ -1.56
HOXD13P35453 OR2AH1P-201ENST00000425717 928 ntBASIC5.31□□□□□ -1.56
HOXD13P35453 AC092162.1-201ENST00000432828 434 ntBASIC5.31□□□□□ -1.56
HOXD13P35453 AL353093.1-201ENST00000441292 436 ntBASIC5.31□□□□□ -1.56
HOXD13P35453 RPL31P44-201ENST00000447680 377 ntBASIC5.31□□□□□ -1.56
HOXD13P35453 CYCSP42-201ENST00000450823 238 ntBASIC5.31□□□□□ -1.56
HOXD13P35453 AC010733.1-201ENST00000451515 401 ntBASIC5.31□□□□□ -1.56
HOXD13P35453 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC5.31□□□□□ -1.56
HOXD13P35453 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC5.31□□□□□ -1.56
HOXD13P35453 GYG1P1-201ENST00000460864 698 ntBASIC5.31□□□□□ -1.56
HOXD13P35453 RN7SL329P-201ENST00000467740 299 ntBASIC5.31□□□□□ -1.56
HOXD13P35453 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
HOXD13P35453 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC5.31□□□□□ -1.56
HOXD13P35453 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC5.31□□□□□ -1.56
HOXD13P35453 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC5.31□□□□□ -1.56
HOXD13P35453 RNA5SP249-201ENST00000516127 99 ntBASIC5.31□□□□□ -1.56
HOXD13P35453 Y_RNA.719-201ENST00000517156 106 ntBASIC5.31□□□□□ -1.56
HOXD13P35453 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC5.31□□□□□ -1.56
HOXD13P35453 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
HOXD13P35453 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC5.31□□□□□ -1.56
HOXD13P35453 APPL2-203ENST00000546731 684 ntTSL 2 BASIC5.31□□□□□ -1.56
HOXD13P35453 FKBP1BP1-201ENST00000553366 325 ntBASIC5.31□□□□□ -1.56
HOXD13P35453 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC5.31□□□□□ -1.56
HOXD13P35453 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC5.31□□□□□ -1.56
HOXD13P35453 AL390334.1-201ENST00000556395 450 ntBASIC5.31□□□□□ -1.56
HOXD13P35453 AC087477.6-201ENST00000559595 843 ntBASIC5.31□□□□□ -1.56
HOXD13P35453 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC5.31□□□□□ -1.56
HOXD13P35453 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC5.31□□□□□ -1.56
HOXD13P35453 PSMA6P4-201ENST00000603247 718 ntBASIC5.31□□□□□ -1.56
HOXD13P35453 MIR7973-1-201ENST00000614683 76 ntBASIC5.31□□□□□ -1.56
HOXD13P35453 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC5.31□□□□□ -1.56
HOXD13P35453 WDR75-207ENST00000631047 270 ntTSL 5 BASIC5.31□□□□□ -1.56
HOXD13P35453 CFTRP2-201ENST00000634304 199 ntBASIC5.31□□□□□ -1.56
HOXD13P35453 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC5.31□□□□□ -1.56
HOXD13P35453 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.31□□□□□ -1.56
HOXD13P35453 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
HOXD13P35453 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.31□□□□□ -1.56
HOXD13P35453 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
HOXD13P35453 AC090017.1-201ENST00000548612 1779 ntBASIC5.31□□□□□ -1.56
HOXD13P35453 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.31□□□□□ -1.56
HOXD13P35453 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
HOXD13P35453 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
HOXD13P35453 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
HOXD13P35453 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.31□□□□□ -1.56
HOXD13P35453 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
HOXD13P35453 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC5.31□□□□□ -1.56
HOXD13P35453 TLK1P1-201ENST00000456760 2440 ntBASIC5.31□□□□□ -1.56
HOXD13P35453 SAMMSON-226ENST00000642089 1582 ntBASIC5.3□□□□□ -1.56
HOXD13P35453 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HOXD13P35453 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
HOXD13P35453 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC5.3□□□□□ -1.56
HOXD13P35453 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
HOXD13P35453 GNAS-202ENST00000306090 477 ntTSL 5 BASIC5.3□□□□□ -1.56
HOXD13P35453 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC5.3□□□□□ -1.56
HOXD13P35453 LINC01881-201ENST00000416103 412 ntBASIC5.3□□□□□ -1.56
HOXD13P35453 AC099336.2-201ENST00000422457 254 ntBASIC5.3□□□□□ -1.56
HOXD13P35453 OR2B7P-201ENST00000429302 934 ntBASIC5.3□□□□□ -1.56
HOXD13P35453 RNFT1P2-201ENST00000443064 757 ntBASIC5.3□□□□□ -1.56
HOXD13P35453 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC5.3□□□□□ -1.56
HOXD13P35453 RPL6P5-201ENST00000445678 828 ntBASIC5.3□□□□□ -1.56
HOXD13P35453 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC5.3□□□□□ -1.56
HOXD13P35453 OR52J1P-201ENST00000450596 932 ntBASIC5.3□□□□□ -1.56
HOXD13P35453 AURKAPS2-201ENST00000454983 333 ntBASIC5.3□□□□□ -1.56
HOXD13P35453 AC099560.2-201ENST00000457554 255 ntBASIC5.3□□□□□ -1.56
HOXD13P35453 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC5.3□□□□□ -1.56
HOXD13P35453 RPL7P16-201ENST00000479738 738 ntBASIC5.3□□□□□ -1.56
HOXD13P35453 AC005912.1-201ENST00000495392 255 ntBASIC5.3□□□□□ -1.56
HOXD13P35453 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.3□□□□□ -1.56
HOXD13P35453 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
HOXD13P35453 HMGB3P16-201ENST00000508037 287 ntBASIC5.3□□□□□ -1.56
HOXD13P35453 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC5.3□□□□□ -1.56
HOXD13P35453 RNA5SP228-201ENST00000516232 133 ntBASIC5.3□□□□□ -1.56
HOXD13P35453 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC5.3□□□□□ -1.56
HOXD13P35453 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
HOXD13P35453 CR383656.14-201ENST00000551951 406 ntBASIC5.3□□□□□ -1.56
HOXD13P35453 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC5.3□□□□□ -1.56
HOXD13P35453 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC5.3□□□□□ -1.56
HOXD13P35453 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC5.3□□□□□ -1.56
HOXD13P35453 AC009117.1-201ENST00000563948 554 ntBASIC5.3□□□□□ -1.56
HOXD13P35453 RN7SL802P-201ENST00000577858 299 ntBASIC5.3□□□□□ -1.56
HOXD13P35453 DPRXP4-201ENST00000578053 568 ntBASIC5.3□□□□□ -1.56
HOXD13P35453 SNORA74C-1-201ENST00000580726 201 ntBASIC5.3□□□□□ -1.56
HOXD13P35453 AC098483.2-201ENST00000603158 454 ntBASIC5.3□□□□□ -1.56
HOXD13P35453 AC096553.1-201ENST00000605169 829 ntBASIC5.3□□□□□ -1.56
HOXD13P35453 AL121932.1-201ENST00000605542 214 ntBASIC5.3□□□□□ -1.56
HOXD13P35453 AC055764.2-201ENST00000610089 670 ntBASIC5.3□□□□□ -1.56
HOXD13P35453 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC5.3□□□□□ -1.56
HOXD13P35453 AC011815.3-201ENST00000624194 473 ntBASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 170.7 ms