Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 CASC19-204ENST00000641001 2055 ntBASIC6.95□□□□□ -1.3
CLIP1P30622 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC6.95□□□□□ -1.3
CLIP1P30622 MAPK10-286ENST00000641208 8747 ntBASIC6.95□□□□□ -1.3
CLIP1P30622 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC6.95□□□□□ -1.3
CLIP1P30622 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
CLIP1P30622 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
CLIP1P30622 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
CLIP1P30622 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
CLIP1P30622 SUPT16HP1-201ENST00000537175 3133 ntBASIC6.94□□□□□ -1.3
CLIP1P30622 PPIAP31-201ENST00000405422 495 ntBASIC6.94□□□□□ -1.3
CLIP1P30622 AMMECR1LP1-201ENST00000415152 841 ntBASIC6.94□□□□□ -1.3
CLIP1P30622 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC6.94□□□□□ -1.3
CLIP1P30622 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
CLIP1P30622 RPL21P129-201ENST00000491732 478 ntBASIC6.94□□□□□ -1.3
CLIP1P30622 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC6.94□□□□□ -1.3
CLIP1P30622 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC6.94□□□□□ -1.3
CLIP1P30622 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC6.94□□□□□ -1.3
CLIP1P30622 AC008966.2-201ENST00000606157 453 ntBASIC6.94□□□□□ -1.3
CLIP1P30622 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC6.94□□□□□ -1.3
CLIP1P30622 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC6.94□□□□□ -1.3
CLIP1P30622 PDCD6IPP1-202ENST00000622242 1064 ntBASIC6.94□□□□□ -1.3
CLIP1P30622 AC138965.3-201ENST00000623875 498 ntBASIC6.94□□□□□ -1.3
CLIP1P30622 EEF1A1P42-201ENST00000613436 1331 ntBASIC6.94□□□□□ -1.3
CLIP1P30622 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
CLIP1P30622 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC6.94□□□□□ -1.3
CLIP1P30622 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
CLIP1P30622 LARP1BP1-201ENST00000506036 1359 ntBASIC6.94□□□□□ -1.3
CLIP1P30622 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
CLIP1P30622 AL050305.1-201ENST00000399993 1230 ntBASIC6.93□□□□□ -1.3
CLIP1P30622 AC090013.1-201ENST00000485147 480 ntBASIC6.93□□□□□ -1.3
CLIP1P30622 RN7SL812P-201ENST00000493791 279 ntBASIC6.93□□□□□ -1.3
CLIP1P30622 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC6.93□□□□□ -1.3
CLIP1P30622 ATP1B1P1-201ENST00000509767 915 ntBASIC6.93□□□□□ -1.3
CLIP1P30622 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC6.93□□□□□ -1.3
CLIP1P30622 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC6.93□□□□□ -1.3
CLIP1P30622 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
CLIP1P30622 AC027455.1-201ENST00000574104 594 ntBASIC6.93□□□□□ -1.3
CLIP1P30622 AL161729.3-201ENST00000603533 673 ntBASIC6.93□□□□□ -1.3
CLIP1P30622 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC6.93□□□□□ -1.3
CLIP1P30622 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
CLIP1P30622 AC008013.2-202ENST00000637965 364 ntBASIC6.93□□□□□ -1.3
CLIP1P30622 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
CLIP1P30622 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC6.93□□□□□ -1.3
CLIP1P30622 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC6.93□□□□□ -1.3
CLIP1P30622 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC6.93□□□□□ -1.3
CLIP1P30622 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC6.93□□□□□ -1.3
CLIP1P30622 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC6.93□□□□□ -1.3
CLIP1P30622 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC6.93□□□□□ -1.3
CLIP1P30622 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
CLIP1P30622 A2MP1-204ENST00000566278 4130 ntBASIC6.93□□□□□ -1.3
CLIP1P30622 CASC19-255ENST00000641733 1385 ntBASIC6.93□□□□□ -1.3
CLIP1P30622 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC6.93□□□□□ -1.3
CLIP1P30622 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
CLIP1P30622 AL121839.2-201ENST00000565058 6943 ntBASIC6.93□□□□□ -1.3
CLIP1P30622 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC6.93□□□□□ -1.3
CLIP1P30622 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC6.93□□□□□ -1.3
CLIP1P30622 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC6.93□□□□□ -1.3
CLIP1P30622 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC6.93□□□□□ -1.3
CLIP1P30622 RNA5SP49-201ENST00000516450 115 ntBASIC6.93□□□□□ -1.3
CLIP1P30622 IGKV3OR22-2-201ENST00000517943 313 ntBASIC6.93□□□□□ -1.3
CLIP1P30622 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC6.93□□□□□ -1.3
CLIP1P30622 AC090506.2-201ENST00000624521 419 ntBASIC6.93□□□□□ -1.3
CLIP1P30622 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
CLIP1P30622 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC6.92□□□□□ -1.3
CLIP1P30622 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
CLIP1P30622 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC6.92□□□□□ -1.3
CLIP1P30622 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
CLIP1P30622 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
CLIP1P30622 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
CLIP1P30622 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
CLIP1P30622 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
CLIP1P30622 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC6.92□□□□□ -1.3
CLIP1P30622 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC6.92□□□□□ -1.3
CLIP1P30622 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
CLIP1P30622 RNU1-44P-201ENST00000384453 163 ntBASIC6.92□□□□□ -1.3
CLIP1P30622 RPS27AP11-201ENST00000402798 447 ntBASIC6.92□□□□□ -1.3
CLIP1P30622 OR8G2P-201ENST00000412796 908 ntBASIC6.92□□□□□ -1.3
CLIP1P30622 VN1R32P-201ENST00000452234 905 ntBASIC6.92□□□□□ -1.3
CLIP1P30622 RPL35AP15-201ENST00000468042 339 ntBASIC6.92□□□□□ -1.3
CLIP1P30622 ENSA-211ENST00000503345 793 ntTSL 3 BASIC6.92□□□□□ -1.3
CLIP1P30622 MORF4L2P1-201ENST00000503761 858 ntBASIC6.92□□□□□ -1.3
CLIP1P30622 SLC25A15P5-201ENST00000508033 253 ntBASIC6.92□□□□□ -1.3
CLIP1P30622 RNA5SP519-201ENST00000516480 119 ntBASIC6.92□□□□□ -1.3
CLIP1P30622 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC6.92□□□□□ -1.3
CLIP1P30622 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
CLIP1P30622 AC009852.2-201ENST00000567898 485 ntBASIC6.92□□□□□ -1.3
CLIP1P30622 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
CLIP1P30622 AC140113.4-201ENST00000622087 222 ntBASIC6.92□□□□□ -1.3
CLIP1P30622 AC034229.5-201ENST00000624258 185 ntBASIC6.92□□□□□ -1.3
CLIP1P30622 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
CLIP1P30622 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
CLIP1P30622 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
CLIP1P30622 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC6.91□□□□□ -1.3
CLIP1P30622 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
CLIP1P30622 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
CLIP1P30622 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
CLIP1P30622 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
CLIP1P30622 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC6.91□□□□□ -1.3
CLIP1P30622 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
CLIP1P30622 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC6.91□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms