Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 MTND4P10-201ENST00000446199 1363 ntBASIC6.3□□□□□ -1.4
CNGA1P29973 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CNGA1P29973 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC6.29□□□□□ -1.4
CNGA1P29973 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC6.29□□□□□ -1.4
CNGA1P29973 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC6.29□□□□□ -1.4
CNGA1P29973 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CNGA1P29973 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CNGA1P29973 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CNGA1P29973 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CNGA1P29973 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC6.29□□□□□ -1.4
CNGA1P29973 AC125336.1-201ENST00000508893 2827 ntBASIC6.29□□□□□ -1.4
CNGA1P29973 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CNGA1P29973 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
CNGA1P29973 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC6.29□□□□□ -1.4
CNGA1P29973 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC6.29□□□□□ -1.4
CNGA1P29973 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC6.29□□□□□ -1.4
CNGA1P29973 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC6.29□□□□□ -1.4
CNGA1P29973 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC6.29□□□□□ -1.4
CNGA1P29973 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC6.29□□□□□ -1.4
CNGA1P29973 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC6.29□□□□□ -1.4
CNGA1P29973 AC108075.1-201ENST00000424692 529 ntBASIC6.29□□□□□ -1.4
CNGA1P29973 VN1R21P-201ENST00000426703 765 ntBASIC6.29□□□□□ -1.4
CNGA1P29973 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CNGA1P29973 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC6.29□□□□□ -1.4
CNGA1P29973 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC6.29□□□□□ -1.4
CNGA1P29973 AC005229.2-201ENST00000456995 399 ntBASIC6.29□□□□□ -1.4
CNGA1P29973 AC109462.1-201ENST00000491087 368 ntBASIC6.29□□□□□ -1.4
CNGA1P29973 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CNGA1P29973 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CNGA1P29973 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC6.29□□□□□ -1.4
CNGA1P29973 HMGB1P23-201ENST00000518743 568 ntBASIC6.29□□□□□ -1.4
CNGA1P29973 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC6.29□□□□□ -1.4
CNGA1P29973 AC010306.1-201ENST00000523223 1117 ntBASIC6.29□□□□□ -1.4
CNGA1P29973 UBTFL10-201ENST00000528532 562 ntBASIC6.29□□□□□ -1.4
CNGA1P29973 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CNGA1P29973 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC6.29□□□□□ -1.4
CNGA1P29973 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC6.29□□□□□ -1.4
CNGA1P29973 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC6.29□□□□□ -1.4
CNGA1P29973 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC6.29□□□□□ -1.4
CNGA1P29973 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC6.29□□□□□ -1.4
CNGA1P29973 AC006116.3-201ENST00000592968 361 ntBASIC6.29□□□□□ -1.4
CNGA1P29973 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC6.29□□□□□ -1.4
CNGA1P29973 CDC42EP3P1-201ENST00000601004 764 ntBASIC6.29□□□□□ -1.4
CNGA1P29973 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC6.29□□□□□ -1.4
CNGA1P29973 AC231759.1-201ENST00000616455 597 ntBASIC6.29□□□□□ -1.4
CNGA1P29973 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC6.29□□□□□ -1.4
CNGA1P29973 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC6.29□□□□□ -1.4
CNGA1P29973 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CNGA1P29973 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC6.29□□□□□ -1.4
CNGA1P29973 AP002782.1-201ENST00000623107 614 ntBASIC6.29□□□□□ -1.4
CNGA1P29973 AC109446.4-201ENST00000623235 2755 ntBASIC6.29□□□□□ -1.4
CNGA1P29973 AC120349.3-201ENST00000624377 529 ntBASIC6.29□□□□□ -1.4
CNGA1P29973 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC6.29□□□□□ -1.4
CNGA1P29973 AC099654.6-201ENST00000636487 512 ntBASIC6.29□□□□□ -1.4
CNGA1P29973 AC004158.1-201ENST00000564508 4319 ntBASIC6.29□□□□□ -1.4
CNGA1P29973 AC096656.1-201ENST00000623826 1364 ntBASIC6.29□□□□□ -1.4
CNGA1P29973 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
CNGA1P29973 AC239868.2-201ENST00000564237 4527 ntBASIC6.29□□□□□ -1.4
CNGA1P29973 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC6.29□□□□□ -1.4
CNGA1P29973 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC6.29□□□□□ -1.4
CNGA1P29973 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC6.28□□□□□ -1.4
CNGA1P29973 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC6.28□□□□□ -1.4
CNGA1P29973 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
CNGA1P29973 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CNGA1P29973 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CNGA1P29973 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CNGA1P29973 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC6.28□□□□□ -1.4
CNGA1P29973 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
CNGA1P29973 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC6.28□□□□□ -1.4
CNGA1P29973 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
CNGA1P29973 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CNGA1P29973 U3.2-201ENST00000362981 210 ntBASIC6.28□□□□□ -1.4
CNGA1P29973 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CNGA1P29973 RNA5SP91-201ENST00000390902 119 ntBASIC6.28□□□□□ -1.4
CNGA1P29973 DNAJA1P3-201ENST00000399417 1194 ntBASIC6.28□□□□□ -1.4
CNGA1P29973 AC107081.1-201ENST00000414975 361 ntBASIC6.28□□□□□ -1.4
CNGA1P29973 ZDHHC20P2-201ENST00000424108 429 ntBASIC6.28□□□□□ -1.4
CNGA1P29973 AL590399.2-201ENST00000427536 309 ntBASIC6.28□□□□□ -1.4
CNGA1P29973 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC6.28□□□□□ -1.4
CNGA1P29973 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC6.28□□□□□ -1.4
CNGA1P29973 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC6.28□□□□□ -1.4
CNGA1P29973 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC6.28□□□□□ -1.4
CNGA1P29973 KRT8P51-201ENST00000438938 274 ntBASIC6.28□□□□□ -1.4
CNGA1P29973 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC6.28□□□□□ -1.4
CNGA1P29973 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC6.28□□□□□ -1.4
CNGA1P29973 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC6.28□□□□□ -1.4
CNGA1P29973 AC105399.1-202ENST00000447303 205 ntBASIC6.28□□□□□ -1.4
CNGA1P29973 MEMO1P4-201ENST00000453590 386 ntBASIC6.28□□□□□ -1.4
CNGA1P29973 CBX1P2-201ENST00000453841 458 ntBASIC6.28□□□□□ -1.4
CNGA1P29973 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC6.28□□□□□ -1.4
CNGA1P29973 BX248409.1-201ENST00000455497 255 ntBASIC6.28□□□□□ -1.4
CNGA1P29973 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC6.28□□□□□ -1.4
CNGA1P29973 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC6.28□□□□□ -1.4
CNGA1P29973 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC6.28□□□□□ -1.4
CNGA1P29973 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC6.28□□□□□ -1.4
CNGA1P29973 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC6.28□□□□□ -1.4
CNGA1P29973 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC6.28□□□□□ -1.4
CNGA1P29973 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC6.28□□□□□ -1.4
CNGA1P29973 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC6.28□□□□□ -1.4
CNGA1P29973 AC136777.2-201ENST00000522979 358 ntBASIC6.28□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms