Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC5.38□□□□□ -1.55
CD40P25942 AL512652.1-201ENST00000619006 500 ntBASIC5.38□□□□□ -1.55
CD40P25942 SNORA11.6-201ENST00000619030 128 ntBASIC5.38□□□□□ -1.55
CD40P25942 AL596275.2-208ENST00000641192 594 ntBASIC5.38□□□□□ -1.55
CD40P25942 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.38□□□□□ -1.55
CD40P25942 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC5.38□□□□□ -1.55
CD40P25942 CCR2-204ENST00000445132 2386 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CD40P25942 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CD40P25942 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CD40P25942 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CD40P25942 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.38□□□□□ -1.55
CD40P25942 DOCK11P1-201ENST00000553480 5932 ntBASIC5.38□□□□□ -1.55
CD40P25942 AC114786.1-201ENST00000512892 1415 ntBASIC5.38□□□□□ -1.55
CD40P25942 AL731556.1-201ENST00000394628 3711 ntBASIC5.38□□□□□ -1.55
CD40P25942 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CD40P25942 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CD40P25942 AC024651.2-201ENST00000562480 2098 ntBASIC5.38□□□□□ -1.55
CD40P25942 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CD40P25942 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CD40P25942 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC5.37□□□□□ -1.55
CD40P25942 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CD40P25942 AL031985.3-201ENST00000565390 2449 ntBASIC5.37□□□□□ -1.55
CD40P25942 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
CD40P25942 DNM1P47-203ENST00000571780 12667 ntBASIC5.37□□□□□ -1.55
CD40P25942 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CD40P25942 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC5.37□□□□□ -1.55
CD40P25942 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC5.37□□□□□ -1.55
CD40P25942 VWA5A-203ENST00000392748 3419 ntAPPRIS P4 TSL 1 (best) BASIC5.37□□□□□ -1.55
CD40P25942 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.37□□□□□ -1.55
CD40P25942 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CD40P25942 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CD40P25942 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC5.37□□□□□ -1.55
CD40P25942 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CD40P25942 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CD40P25942 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CD40P25942 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CD40P25942 MIR433-201ENST00000384837 93 ntBASIC5.37□□□□□ -1.55
CD40P25942 TANK-206ENST00000406287 875 ntTSL 5 BASIC5.37□□□□□ -1.55
CD40P25942 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC5.37□□□□□ -1.55
CD40P25942 RAD23BP2-201ENST00000416003 1207 ntBASIC5.37□□□□□ -1.55
CD40P25942 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC5.37□□□□□ -1.55
CD40P25942 ATG4AP1-201ENST00000416893 538 ntBASIC5.37□□□□□ -1.55
CD40P25942 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC5.37□□□□□ -1.55
CD40P25942 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC5.37□□□□□ -1.55
CD40P25942 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC5.37□□□□□ -1.55
CD40P25942 AC023141.3-201ENST00000436698 278 ntBASIC5.37□□□□□ -1.55
CD40P25942 AL353662.1-201ENST00000439099 327 ntBASIC5.37□□□□□ -1.55
CD40P25942 RPL12P11-201ENST00000439970 501 ntBASIC5.37□□□□□ -1.55
CD40P25942 EIF5AP4-201ENST00000441206 465 ntBASIC5.37□□□□□ -1.55
CD40P25942 AL357520.1-201ENST00000441557 453 ntBASIC5.37□□□□□ -1.55
CD40P25942 AL512593.1-201ENST00000444758 779 ntBASIC5.37□□□□□ -1.55
CD40P25942 EEF1E1P1-201ENST00000446998 430 ntBASIC5.37□□□□□ -1.55
CD40P25942 AL592447.1-201ENST00000447592 540 ntBASIC5.37□□□□□ -1.55
CD40P25942 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC5.37□□□□□ -1.55
CD40P25942 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC5.37□□□□□ -1.55
CD40P25942 PPIAP27-201ENST00000453800 265 ntBASIC5.37□□□□□ -1.55
CD40P25942 AC023194.2-201ENST00000465398 406 ntBASIC5.37□□□□□ -1.55
CD40P25942 NDUFA5P5-201ENST00000468361 342 ntBASIC5.37□□□□□ -1.55
CD40P25942 AC104763.1-201ENST00000475274 360 ntBASIC5.37□□□□□ -1.55
CD40P25942 AC090638.1-201ENST00000498296 909 ntBASIC5.37□□□□□ -1.55
CD40P25942 LSM3P4-201ENST00000502948 309 ntBASIC5.37□□□□□ -1.55
CD40P25942 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CD40P25942 ARL2BPP4-201ENST00000506854 471 ntBASIC5.37□□□□□ -1.55
CD40P25942 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC5.37□□□□□ -1.55
CD40P25942 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CD40P25942 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC5.37□□□□□ -1.55
CD40P25942 RN7SKP96-201ENST00000516948 297 ntBASIC5.37□□□□□ -1.55
CD40P25942 AC073581.1-201ENST00000519036 575 ntBASIC5.37□□□□□ -1.55
CD40P25942 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.37□□□□□ -1.55
CD40P25942 FAU-203ENST00000525297 355 ntTSL 5 BASIC5.37□□□□□ -1.55
CD40P25942 AP003392.2-201ENST00000527269 208 ntBASIC5.37□□□□□ -1.55
CD40P25942 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC5.37□□□□□ -1.55
CD40P25942 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC5.37□□□□□ -1.55
CD40P25942 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC5.37□□□□□ -1.55
CD40P25942 AC027667.1-201ENST00000545814 304 ntBASIC5.37□□□□□ -1.55
CD40P25942 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC5.37□□□□□ -1.55
CD40P25942 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC5.37□□□□□ -1.55
CD40P25942 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC5.37□□□□□ -1.55
CD40P25942 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC5.37□□□□□ -1.55
CD40P25942 AC091805.2-201ENST00000603848 235 ntBASIC5.37□□□□□ -1.55
CD40P25942 AC005084.1-201ENST00000605160 304 ntBASIC5.37□□□□□ -1.55
CD40P25942 AC090186.1-201ENST00000605991 572 ntBASIC5.37□□□□□ -1.55
CD40P25942 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CD40P25942 AC022400.9-201ENST00000623633 273 ntBASIC5.37□□□□□ -1.55
CD40P25942 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC5.37□□□□□ -1.55
CD40P25942 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC5.37□□□□□ -1.55
CD40P25942 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CD40P25942 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CD40P25942 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CD40P25942 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC5.37□□□□□ -1.55
CD40P25942 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CD40P25942 OLMALINC-203ENST00000641087 3779 ntBASIC5.37□□□□□ -1.55
CD40P25942 GYPA-214ENST00000641688 1764 ntAPPRIS ALT2 BASIC5.37□□□□□ -1.55
CD40P25942 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CD40P25942 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
CD40P25942 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC5.36□□□□□ -1.55
CD40P25942 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CD40P25942 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CD40P25942 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CD40P25942 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms