Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 AC009977.1-201ENST00000586015 570 ntBASIC7.26□□□□□ -1.25
RFX1P22670 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC7.26□□□□□ -1.25
RFX1P22670 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC7.26□□□□□ -1.25
RFX1P22670 AL953862.2-201ENST00000603089 820 ntBASIC7.26□□□□□ -1.25
RFX1P22670 AL590032.1-201ENST00000604920 252 ntBASIC7.26□□□□□ -1.25
RFX1P22670 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC7.26□□□□□ -1.25
RFX1P22670 AC116563.2-201ENST00000624751 535 ntBASIC7.26□□□□□ -1.25
RFX1P22670 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC7.26□□□□□ -1.25
RFX1P22670 GAGE1-204ENST00000619375 2873 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
RFX1P22670 ZNF438-201ENST00000331737 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC7.26□□□□□ -1.25
RFX1P22670 AL034546.1-201ENST00000623740 3693 ntBASIC7.26□□□□□ -1.25
RFX1P22670 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
RFX1P22670 TCF7L2-220ENST00000543371 4037 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
RFX1P22670 AC107980.1-201ENST00000558671 3355 ntBASIC7.26□□□□□ -1.25
RFX1P22670 AC068490.1-202ENST00000637384 3185 ntTSL 5 BASIC7.26□□□□□ -1.25
RFX1P22670 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
RFX1P22670 NBPF3-202ENST00000318249 3591 ntAPPRIS P3 TSL 1 (best) BASIC7.25□□□□□ -1.25
RFX1P22670 KCNMB2-204ENST00000432997 2552 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
RFX1P22670 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
RFX1P22670 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
RFX1P22670 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
RFX1P22670 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
RFX1P22670 FOCAD-201ENST00000338382 5765 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
RFX1P22670 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
RFX1P22670 OLFM4-201ENST00000219022 2897 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
RFX1P22670 AC011933.2-201ENST00000578539 2790 ntBASIC7.25□□□□□ -1.25
RFX1P22670 Y_RNA.70-201ENST00000362886 110 ntBASIC7.25□□□□□ -1.25
RFX1P22670 RNA5SP435-201ENST00000364044 108 ntBASIC7.25□□□□□ -1.25
RFX1P22670 Y_RNA.372-201ENST00000365599 102 ntBASIC7.25□□□□□ -1.25
RFX1P22670 U3.23-201ENST00000391132 200 ntBASIC7.25□□□□□ -1.25
RFX1P22670 FCF1P10-201ENST00000407590 479 ntBASIC7.25□□□□□ -1.25
RFX1P22670 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC7.25□□□□□ -1.25
RFX1P22670 C1DP2-201ENST00000418167 426 ntBASIC7.25□□□□□ -1.25
RFX1P22670 AC004690.1-201ENST00000418216 328 ntBASIC7.25□□□□□ -1.25
RFX1P22670 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC7.25□□□□□ -1.25
RFX1P22670 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC7.25□□□□□ -1.25
RFX1P22670 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC7.25□□□□□ -1.25
RFX1P22670 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC7.25□□□□□ -1.25
RFX1P22670 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC7.25□□□□□ -1.25
RFX1P22670 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC7.25□□□□□ -1.25
RFX1P22670 EIF5AP4-201ENST00000441206 465 ntBASIC7.25□□□□□ -1.25
RFX1P22670 CXCR2P1-202ENST00000443392 1074 ntBASIC7.25□□□□□ -1.25
RFX1P22670 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC7.25□□□□□ -1.25
RFX1P22670 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC7.25□□□□□ -1.25
RFX1P22670 AC113367.2-201ENST00000505749 160 ntBASIC7.25□□□□□ -1.25
RFX1P22670 AC022447.3-201ENST00000506865 495 ntBASIC7.25□□□□□ -1.25
RFX1P22670 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC7.25□□□□□ -1.25
RFX1P22670 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC7.25□□□□□ -1.25
RFX1P22670 AC093816.1-201ENST00000515076 913 ntBASIC7.25□□□□□ -1.25
RFX1P22670 RNU6-202P-201ENST00000515998 96 ntBASIC7.25□□□□□ -1.25
RFX1P22670 SNORA18.6-201ENST00000516792 115 ntBASIC7.25□□□□□ -1.25
RFX1P22670 IGLV3-6-201ENST00000523937 250 ntBASIC7.25□□□□□ -1.25
RFX1P22670 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC7.25□□□□□ -1.25
RFX1P22670 PPIAP6-201ENST00000557078 499 ntBASIC7.25□□□□□ -1.25
RFX1P22670 MIR544B-201ENST00000582372 78 ntBASIC7.25□□□□□ -1.25
RFX1P22670 MIR4637-201ENST00000582405 84 ntBASIC7.25□□□□□ -1.25
RFX1P22670 AL356055.1-201ENST00000602528 446 ntBASIC7.25□□□□□ -1.25
RFX1P22670 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC7.25□□□□□ -1.25
RFX1P22670 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC7.25□□□□□ -1.25
RFX1P22670 AC024475.3-203ENST00000634971 854 ntTSL 5 BASIC7.25□□□□□ -1.25
RFX1P22670 AL121936.2-201ENST00000641935 662 ntBASIC7.25□□□□□ -1.25
RFX1P22670 ZNF211-202ENST00000254182 1959 ntTSL 2 BASIC7.25□□□□□ -1.25
RFX1P22670 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
RFX1P22670 ACTA2-AS1-201ENST00000437930 2450 ntTSL 2 BASIC7.25□□□□□ -1.25
RFX1P22670 ZNF806-201ENST00000438300 1774 ntBASIC7.25□□□□□ -1.25
RFX1P22670 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC7.25□□□□□ -1.25
RFX1P22670 GYPA-214ENST00000641688 1764 ntAPPRIS ALT2 BASIC7.25□□□□□ -1.25
RFX1P22670 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
RFX1P22670 ABI1-207ENST00000376142 3576 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
RFX1P22670 DNM1L-205ENST00000414834 4211 ntTSL 2 BASIC7.25□□□□□ -1.25
RFX1P22670 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
RFX1P22670 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
RFX1P22670 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC7.25□□□□□ -1.25
RFX1P22670 AC005332.9-201ENST00000620266 2921 ntBASIC7.24□□□□□ -1.25
RFX1P22670 TMEM217-202ENST00000356757 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
RFX1P22670 MSL3P1-202ENST00000440028 1468 ntBASIC7.24□□□□□ -1.25
RFX1P22670 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
RFX1P22670 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC7.24□□□□□ -1.25
RFX1P22670 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
RFX1P22670 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC7.24□□□□□ -1.25
RFX1P22670 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC7.24□□□□□ -1.25
RFX1P22670 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC7.24□□□□□ -1.25
RFX1P22670 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC7.24□□□□□ -1.25
RFX1P22670 FAM160A1-203ENST00000505231 4156 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
RFX1P22670 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC7.24□□□□□ -1.25
RFX1P22670 AL136531.3-201ENST00000624378 3658 ntBASIC7.24□□□□□ -1.25
RFX1P22670 FARSBP1-201ENST00000435808 1778 ntBASIC7.24□□□□□ -1.25
RFX1P22670 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
RFX1P22670 AC010894.1-201ENST00000313760 361 ntBASIC7.24□□□□□ -1.25
RFX1P22670 OR4A15-201ENST00000314706 1035 ntBASIC7.24□□□□□ -1.25
RFX1P22670 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
RFX1P22670 RNU1-5P-201ENST00000362684 144 ntBASIC7.24□□□□□ -1.25
RFX1P22670 RNY4P14-201ENST00000363656 96 ntBASIC7.24□□□□□ -1.25
RFX1P22670 RN7SKP130-201ENST00000364924 301 ntBASIC7.24□□□□□ -1.25
RFX1P22670 Y_RNA.296-201ENST00000364930 108 ntBASIC7.24□□□□□ -1.25
RFX1P22670 RNU6-444P-201ENST00000383988 108 ntBASIC7.24□□□□□ -1.25
RFX1P22670 Y_RNA.453-201ENST00000384223 109 ntBASIC7.24□□□□□ -1.25
RFX1P22670 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
RFX1P22670 AC005522.1-201ENST00000395416 346 ntBASIC7.24□□□□□ -1.25
RFX1P22670 FDPSP5-201ENST00000399474 1057 ntBASIC7.24□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms