Protein–RNA interactions for Protein: P22415

USF1, Upstream stimulatory factor 1, humanhuman

Predicted RBP Predictions only

Length 310 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF1P22415 BANCR-201ENST00000624238 473 ntTSL 2 BASIC4.09□□□□□ -1.75
USF1P22415 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
USF1P22415 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
USF1P22415 MAPK10-349ENST00000641767 3661 ntBASIC4.09□□□□□ -1.76
USF1P22415 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.08□□□□□ -1.76
USF1P22415 AC107068.1-201ENST00000563286 4218 ntBASIC4.08□□□□□ -1.76
USF1P22415 OR4K15-201ENST00000305051 1216 ntBASIC4.08□□□□□ -1.76
USF1P22415 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
USF1P22415 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
USF1P22415 RPL32P3-201ENST00000359025 275 ntBASIC4.08□□□□□ -1.76
USF1P22415 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC4.08□□□□□ -1.76
USF1P22415 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.08□□□□□ -1.76
USF1P22415 AL512430.2-201ENST00000406786 339 ntBASIC4.08□□□□□ -1.76
USF1P22415 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC4.08□□□□□ -1.76
USF1P22415 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC4.08□□□□□ -1.76
USF1P22415 TRIM60P17-201ENST00000415181 719 ntBASIC4.08□□□□□ -1.76
USF1P22415 NCLP2-201ENST00000416078 1462 ntBASIC4.08□□□□□ -1.76
USF1P22415 RPL18P10-201ENST00000425606 538 ntBASIC4.08□□□□□ -1.76
USF1P22415 CENPIP1-201ENST00000425713 902 ntBASIC4.08□□□□□ -1.76
USF1P22415 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC4.08□□□□□ -1.76
USF1P22415 AC016831.4-201ENST00000438302 307 ntBASIC4.08□□□□□ -1.76
USF1P22415 TXNP5-201ENST00000441043 315 ntBASIC4.08□□□□□ -1.76
USF1P22415 RPL36AP15-201ENST00000444514 266 ntBASIC4.08□□□□□ -1.76
USF1P22415 AL035551.1-201ENST00000446931 348 ntBASIC4.08□□□□□ -1.76
USF1P22415 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC4.08□□□□□ -1.76
USF1P22415 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC4.08□□□□□ -1.76
USF1P22415 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.08□□□□□ -1.76
USF1P22415 AC022431.1-201ENST00000450941 438 ntBASIC4.08□□□□□ -1.76
USF1P22415 RPL10P17-201ENST00000453852 316 ntBASIC4.08□□□□□ -1.76
USF1P22415 OR7L1P-201ENST00000456181 380 ntBASIC4.08□□□□□ -1.76
USF1P22415 HNRNPDLP3-201ENST00000456745 380 ntBASIC4.08□□□□□ -1.76
USF1P22415 RPL23AP56-201ENST00000460778 453 ntBASIC4.08□□□□□ -1.76
USF1P22415 RPS23P7-201ENST00000466210 444 ntBASIC4.08□□□□□ -1.76
USF1P22415 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.08□□□□□ -1.76
USF1P22415 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.08□□□□□ -1.76
USF1P22415 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC4.08□□□□□ -1.76
USF1P22415 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC4.08□□□□□ -1.76
USF1P22415 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
USF1P22415 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC4.08□□□□□ -1.76
USF1P22415 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC4.08□□□□□ -1.76
USF1P22415 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC4.08□□□□□ -1.76
USF1P22415 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.08□□□□□ -1.76
USF1P22415 FAM60CP-201ENST00000591086 664 ntBASIC4.08□□□□□ -1.76
USF1P22415 AC020915.5-201ENST00000596836 964 ntBASIC4.08□□□□□ -1.76
USF1P22415 AC068790.7-201ENST00000602347 528 ntBASIC4.08□□□□□ -1.76
USF1P22415 AC093765.1-201ENST00000603758 881 ntBASIC4.08□□□□□ -1.76
USF1P22415 IGKV1OR2-9-201ENST00000603957 287 ntBASIC4.08□□□□□ -1.76
USF1P22415 IGKV1OR2-11-201ENST00000604120 287 ntBASIC4.08□□□□□ -1.76
USF1P22415 AC098935.2-201ENST00000604222 466 ntBASIC4.08□□□□□ -1.76
USF1P22415 AC023813.4-201ENST00000607580 580 ntBASIC4.08□□□□□ -1.76
USF1P22415 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC4.08□□□□□ -1.76
USF1P22415 AL049794.2-201ENST00000616301 365 ntBASIC4.08□□□□□ -1.76
USF1P22415 AC131238.1-201ENST00000617135 328 ntBASIC4.08□□□□□ -1.76
USF1P22415 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.08□□□□□ -1.76
USF1P22415 AL023881.1-201ENST00000621088 301 ntBASIC4.08□□□□□ -1.76
USF1P22415 AC243960.7-201ENST00000623532 707 ntBASIC4.08□□□□□ -1.76
USF1P22415 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
USF1P22415 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.08□□□□□ -1.76
USF1P22415 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
USF1P22415 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
USF1P22415 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.08□□□□□ -1.76
USF1P22415 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
USF1P22415 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
USF1P22415 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC4.07□□□□□ -1.76
USF1P22415 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
USF1P22415 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
USF1P22415 Z95327.2-201ENST00000414579 1873 ntBASIC4.07□□□□□ -1.76
USF1P22415 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.07□□□□□ -1.76
USF1P22415 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.07□□□□□ -1.76
USF1P22415 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
USF1P22415 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC4.07□□□□□ -1.76
USF1P22415 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
USF1P22415 Z98755.1-201ENST00000407015 1384 ntBASIC4.07□□□□□ -1.76
USF1P22415 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
USF1P22415 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC4.07□□□□□ -1.76
USF1P22415 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
USF1P22415 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
USF1P22415 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
USF1P22415 RN7SKP106-201ENST00000410832 272 ntBASIC4.07□□□□□ -1.76
USF1P22415 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC4.07□□□□□ -1.76
USF1P22415 OR5M12P-201ENST00000423388 929 ntBASIC4.07□□□□□ -1.76
USF1P22415 AC012519.1-201ENST00000424588 610 ntBASIC4.07□□□□□ -1.76
USF1P22415 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC4.07□□□□□ -1.76
USF1P22415 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC4.07□□□□□ -1.76
USF1P22415 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC4.07□□□□□ -1.76
USF1P22415 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC4.07□□□□□ -1.76
USF1P22415 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
USF1P22415 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC4.07□□□□□ -1.76
USF1P22415 AC069277.2-201ENST00000454211 432 ntBASIC4.07□□□□□ -1.76
USF1P22415 BTG4P1-201ENST00000510421 183 ntBASIC4.07□□□□□ -1.76
USF1P22415 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.07□□□□□ -1.76
USF1P22415 RN7SKP46-201ENST00000515942 234 ntBASIC4.07□□□□□ -1.76
USF1P22415 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.07□□□□□ -1.76
USF1P22415 RPL23AP53-201ENST00000521854 457 ntBASIC4.07□□□□□ -1.76
USF1P22415 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.07□□□□□ -1.76
USF1P22415 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC4.07□□□□□ -1.76
USF1P22415 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.07□□□□□ -1.76
USF1P22415 TOMM20P2-201ENST00000540082 421 ntBASIC4.07□□□□□ -1.76
USF1P22415 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.07□□□□□ -1.76
USF1P22415 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms