Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.44□□□□□ -1.7
HLA-DQB2P05538 AP002981.1-201ENST00000517692 975 ntBASIC4.44□□□□□ -1.7
HLA-DQB2P05538 AC100770.1-201ENST00000532310 322 ntBASIC4.44□□□□□ -1.7
HLA-DQB2P05538 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
HLA-DQB2P05538 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC4.44□□□□□ -1.7
HLA-DQB2P05538 AL354984.3-201ENST00000604803 325 ntBASIC4.44□□□□□ -1.7
HLA-DQB2P05538 AC090948.1-201ENST00000607464 549 ntBASIC4.44□□□□□ -1.7
HLA-DQB2P05538 AC019193.2-201ENST00000610012 634 ntBASIC4.44□□□□□ -1.7
HLA-DQB2P05538 MIR6820-201ENST00000611508 62 ntBASIC4.44□□□□□ -1.7
HLA-DQB2P05538 AL122125.1-201ENST00000616999 600 ntBASIC4.44□□□□□ -1.7
HLA-DQB2P05538 AC023509.5-201ENST00000617434 807 ntBASIC4.44□□□□□ -1.7
HLA-DQB2P05538 AC007546.1-201ENST00000619452 559 ntBASIC4.44□□□□□ -1.7
HLA-DQB2P05538 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC4.44□□□□□ -1.7
HLA-DQB2P05538 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.44□□□□□ -1.7
HLA-DQB2P05538 AC090017.1-201ENST00000548612 1779 ntBASIC4.44□□□□□ -1.7
HLA-DQB2P05538 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC4.44□□□□□ -1.7
HLA-DQB2P05538 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
HLA-DQB2P05538 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.44□□□□□ -1.7
HLA-DQB2P05538 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
HLA-DQB2P05538 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
HLA-DQB2P05538 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.44□□□□□ -1.7
HLA-DQB2P05538 DDX18P4-201ENST00000511690 1966 ntBASIC4.44□□□□□ -1.7
HLA-DQB2P05538 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
HLA-DQB2P05538 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
HLA-DQB2P05538 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.43□□□□□ -1.7
HLA-DQB2P05538 NEAT1-202ENST00000501122 22743 ntBASIC4.43□□□□□ -1.7
HLA-DQB2P05538 MFSD8-242ENST00000641690 4199 ntBASIC4.43□□□□□ -1.7
HLA-DQB2P05538 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
HLA-DQB2P05538 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.43□□□□□ -1.7
HLA-DQB2P05538 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
HLA-DQB2P05538 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.43□□□□□ -1.7
HLA-DQB2P05538 RPS4XP9-201ENST00000405151 780 ntBASIC4.43□□□□□ -1.7
HLA-DQB2P05538 ELOCP19-201ENST00000411919 318 ntBASIC4.43□□□□□ -1.7
HLA-DQB2P05538 AC016769.2-201ENST00000414815 475 ntBASIC4.43□□□□□ -1.7
HLA-DQB2P05538 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC4.43□□□□□ -1.7
HLA-DQB2P05538 UBTFL3-201ENST00000418934 1024 ntBASIC4.43□□□□□ -1.7
HLA-DQB2P05538 AC245028.1-201ENST00000423259 256 ntBASIC4.43□□□□□ -1.7
HLA-DQB2P05538 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.43□□□□□ -1.7
HLA-DQB2P05538 NFYAP1-201ENST00000431953 972 ntBASIC4.43□□□□□ -1.7
HLA-DQB2P05538 NPM1P33-201ENST00000438918 872 ntBASIC4.43□□□□□ -1.7
HLA-DQB2P05538 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
HLA-DQB2P05538 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.43□□□□□ -1.7
HLA-DQB2P05538 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.43□□□□□ -1.7
HLA-DQB2P05538 snoU13.1-201ENST00000459157 104 ntBASIC4.43□□□□□ -1.7
HLA-DQB2P05538 UBTFL6-201ENST00000477929 1024 ntBASIC4.43□□□□□ -1.7
HLA-DQB2P05538 AC091544.1-201ENST00000484702 348 ntBASIC4.43□□□□□ -1.7
HLA-DQB2P05538 NIP7P2-201ENST00000485801 544 ntBASIC4.43□□□□□ -1.7
HLA-DQB2P05538 RPS23P1-201ENST00000491662 432 ntBASIC4.43□□□□□ -1.7
HLA-DQB2P05538 RN7SL812P-201ENST00000493791 279 ntBASIC4.43□□□□□ -1.7
HLA-DQB2P05538 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
HLA-DQB2P05538 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC4.43□□□□□ -1.7
HLA-DQB2P05538 AC025674.1-201ENST00000507074 324 ntBASIC4.43□□□□□ -1.7
HLA-DQB2P05538 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC4.43□□□□□ -1.7
HLA-DQB2P05538 AC015795.1-201ENST00000513669 327 ntBASIC4.43□□□□□ -1.7
HLA-DQB2P05538 LDHBP3-201ENST00000514909 822 ntBASIC4.43□□□□□ -1.7
HLA-DQB2P05538 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC4.43□□□□□ -1.7
HLA-DQB2P05538 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.43□□□□□ -1.7
HLA-DQB2P05538 AC021483.2-201ENST00000567415 758 ntBASIC4.43□□□□□ -1.7
HLA-DQB2P05538 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.43□□□□□ -1.7
HLA-DQB2P05538 AC139713.2-214ENST00000642059 1811 ntBASIC4.43□□□□□ -1.7
HLA-DQB2P05538 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
HLA-DQB2P05538 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.43□□□□□ -1.7
HLA-DQB2P05538 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
HLA-DQB2P05538 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.43□□□□□ -1.7
HLA-DQB2P05538 OSBPL9P1-201ENST00000604744 1469 ntBASIC4.43□□□□□ -1.7
HLA-DQB2P05538 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
HLA-DQB2P05538 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
HLA-DQB2P05538 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC4.42□□□□□ -1.7
HLA-DQB2P05538 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
HLA-DQB2P05538 AC067945.1-201ENST00000342609 618 ntBASIC4.42□□□□□ -1.7
HLA-DQB2P05538 IGKV7-3-201ENST00000357453 298 ntBASIC4.42□□□□□ -1.7
HLA-DQB2P05538 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
HLA-DQB2P05538 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.42□□□□□ -1.7
HLA-DQB2P05538 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.42□□□□□ -1.7
HLA-DQB2P05538 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.42□□□□□ -1.7
HLA-DQB2P05538 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC4.42□□□□□ -1.7
HLA-DQB2P05538 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.42□□□□□ -1.7
HLA-DQB2P05538 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC4.42□□□□□ -1.7
HLA-DQB2P05538 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC4.42□□□□□ -1.7
HLA-DQB2P05538 RPL23AP52-201ENST00000439311 478 ntBASIC4.42□□□□□ -1.7
HLA-DQB2P05538 CEACAMP9-201ENST00000442990 513 ntBASIC4.42□□□□□ -1.7
HLA-DQB2P05538 TXNP2-201ENST00000443918 295 ntBASIC4.42□□□□□ -1.7
HLA-DQB2P05538 PHBP16-201ENST00000446318 950 ntBASIC4.42□□□□□ -1.7
HLA-DQB2P05538 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.42□□□□□ -1.7
HLA-DQB2P05538 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.42□□□□□ -1.7
HLA-DQB2P05538 RN7SL98P-201ENST00000462271 300 ntBASIC4.42□□□□□ -1.7
HLA-DQB2P05538 RPL7P22-201ENST00000466005 733 ntBASIC4.42□□□□□ -1.7
HLA-DQB2P05538 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HLA-DQB2P05538 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC4.42□□□□□ -1.7
HLA-DQB2P05538 RNA5SP228-201ENST00000516232 133 ntBASIC4.42□□□□□ -1.7
HLA-DQB2P05538 AC008694.2-201ENST00000517591 306 ntBASIC4.42□□□□□ -1.7
HLA-DQB2P05538 IGLV3-26-201ENST00000520756 302 ntBASIC4.42□□□□□ -1.7
HLA-DQB2P05538 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
HLA-DQB2P05538 CR383656.6-201ENST00000550518 394 ntBASIC4.42□□□□□ -1.7
HLA-DQB2P05538 AL352979.3-201ENST00000553515 247 ntBASIC4.42□□□□□ -1.7
HLA-DQB2P05538 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC4.42□□□□□ -1.7
HLA-DQB2P05538 MIR5096-201ENST00000583713 70 ntBASIC4.42□□□□□ -1.7
HLA-DQB2P05538 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC4.42□□□□□ -1.7
HLA-DQB2P05538 AC104785.1-201ENST00000603220 588 ntBASIC4.42□□□□□ -1.7
HLA-DQB2P05538 AC113403.1-201ENST00000604910 193 ntBASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms