Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC2.66□□□□□ -1.98
APOBP04114 Z95327.3-201ENST00000610385 572 ntBASIC2.66□□□□□ -1.98
APOBP04114 AC010608.2-201ENST00000624830 470 ntBASIC2.66□□□□□ -1.98
APOBP04114 OR5BE1P-202ENST00000641168 1176 ntBASIC2.66□□□□□ -1.98
APOBP04114 PCDH15-230ENST00000617051 7048 ntTSL 5 BASIC2.66□□□□□ -1.98
APOBP04114 ERCC6-202ENST00000374127 1782 ntBASIC2.66□□□□□ -1.98
APOBP04114 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC2.66□□□□□ -1.98
APOBP04114 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
APOBP04114 GCNT1-202ENST00000442371 5972 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
APOBP04114 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
APOBP04114 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
APOBP04114 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
APOBP04114 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
APOBP04114 AC104333.2-201ENST00000422630 192 ntBASIC2.66□□□□□ -1.98
APOBP04114 RPS27AP17-201ENST00000463344 455 ntBASIC2.66□□□□□ -1.98
APOBP04114 RPL7P49-201ENST00000471402 708 ntBASIC2.66□□□□□ -1.98
APOBP04114 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC2.66□□□□□ -1.98
APOBP04114 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC2.66□□□□□ -1.98
APOBP04114 AL034408.1-202ENST00000636088 415 ntBASIC2.66□□□□□ -1.98
APOBP04114 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC2.66□□□□□ -1.98
APOBP04114 INTS2-202ENST00000444766 5878 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
APOBP04114 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC2.65□□□□□ -1.98
APOBP04114 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC2.65□□□□□ -1.98
APOBP04114 MFSD8-242ENST00000641690 4199 ntBASIC2.65□□□□□ -1.98
APOBP04114 PPM1L-205ENST00000498165 10934 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
APOBP04114 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC2.65□□□□□ -1.98
APOBP04114 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC2.65□□□□□ -1.98
APOBP04114 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
APOBP04114 RNU1-83P-201ENST00000363426 164 ntBASIC2.65□□□□□ -1.98
APOBP04114 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC2.65□□□□□ -1.98
APOBP04114 OR51B4-201ENST00000380224 933 ntAPPRIS P1 BASIC2.65□□□□□ -1.98
APOBP04114 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC2.65□□□□□ -1.98
APOBP04114 AC115115.1-201ENST00000449927 248 ntBASIC2.65□□□□□ -1.98
APOBP04114 AF213884.1-201ENST00000488102 463 ntBASIC2.65□□□□□ -1.98
APOBP04114 RNU4ATAC18P-201ENST00000516179 126 ntBASIC2.65□□□□□ -1.98
APOBP04114 RNU1-95P-201ENST00000516357 160 ntBASIC2.65□□□□□ -1.98
APOBP04114 RNU1-128P-201ENST00000516704 160 ntBASIC2.65□□□□□ -1.98
APOBP04114 AC007546.2-201ENST00000623996 360 ntBASIC2.65□□□□□ -1.98
APOBP04114 ATP2B4-204ENST00000367218 8918 ntTSL 1 (best) BASIC2.65□□□□□ -1.98
APOBP04114 OR4K6P-201ENST00000416478 897 ntBASIC2.65□□□□□ -1.99
APOBP04114 HNRNPA1P29-201ENST00000426409 879 ntBASIC2.65□□□□□ -1.99
APOBP04114 RPL7P2-201ENST00000427639 268 ntBASIC2.65□□□□□ -1.99
APOBP04114 AL591363.1-201ENST00000450091 483 ntBASIC2.65□□□□□ -1.99
APOBP04114 RPL35AP15-201ENST00000468042 339 ntBASIC2.65□□□□□ -1.99
APOBP04114 RN7SL429P-201ENST00000479090 223 ntBASIC2.65□□□□□ -1.99
APOBP04114 RN7SL489P-201ENST00000486185 223 ntBASIC2.65□□□□□ -1.99
APOBP04114 RN7SL327P-201ENST00000488659 223 ntBASIC2.65□□□□□ -1.99
APOBP04114 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC2.65□□□□□ -1.99
APOBP04114 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC2.65□□□□□ -1.99
APOBP04114 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC2.65□□□□□ -1.99
APOBP04114 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
APOBP04114 DUXAP2-201ENST00000519198 589 ntBASIC2.65□□□□□ -1.99
APOBP04114 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC2.65□□□□□ -1.99
APOBP04114 OCLM-201ENST00000574641 884 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
APOBP04114 MIR5195-201ENST00000583555 115 ntBASIC2.65□□□□□ -1.99
APOBP04114 RN7SL853P-201ENST00000617250 223 ntBASIC2.65□□□□□ -1.99
APOBP04114 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC2.65□□□□□ -1.99
APOBP04114 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
APOBP04114 AC105074.1-201ENST00000623380 3095 ntBASIC2.65□□□□□ -1.99
APOBP04114 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
APOBP04114 PPP1R12B-216ENST00000608999 15248 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
APOBP04114 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC2.65□□□□□ -1.99
APOBP04114 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC2.65□□□□□ -1.99
APOBP04114 IGF1-206ENST00000456098 7370 ntTSL 5 BASIC2.65□□□□□ -1.99
APOBP04114 ZDBF2-201ENST00000374423 10286 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
APOBP04114 KMT2C-201ENST00000262189 16862 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
APOBP04114 PRRC2C-201ENST00000338920 10355 ntAPPRIS P2 TSL 5 BASIC2.65□□□□□ -1.99
APOBP04114 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC2.65□□□□□ -1.99
APOBP04114 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC2.65□□□□□ -1.99
APOBP04114 RPS4XP4-201ENST00000443195 763 ntBASIC2.65□□□□□ -1.99
APOBP04114 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC2.65□□□□□ -1.99
APOBP04114 MYL12BP2-201ENST00000503948 512 ntBASIC2.65□□□□□ -1.99
APOBP04114 RPL23AP94-201ENST00000512518 302 ntBASIC2.65□□□□□ -1.99
APOBP04114 AC093853.1-201ENST00000515689 483 ntBASIC2.65□□□□□ -1.99
APOBP04114 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC2.65□□□□□ -1.99
APOBP04114 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC2.65□□□□□ -1.99
APOBP04114 AC244505.7-201ENST00000599675 272 ntBASIC2.65□□□□□ -1.99
APOBP04114 AL031985.2-201ENST00000600955 480 ntBASIC2.65□□□□□ -1.99
APOBP04114 AC114878.2-201ENST00000604863 1251 ntBASIC2.65□□□□□ -1.99
APOBP04114 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC2.65□□□□□ -1.99
APOBP04114 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC2.65□□□□□ -1.99
APOBP04114 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC2.65□□□□□ -1.99
APOBP04114 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC2.65□□□□□ -1.99
APOBP04114 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.99
APOBP04114 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC2.65□□□□□ -1.99
APOBP04114 CHD8-201ENST00000399982 8229 ntAPPRIS ALT2 TSL 1 (best) BASIC2.65□□□□□ -1.99
APOBP04114 AC120036.2-201ENST00000509729 1474 ntBASIC2.65□□□□□ -1.99
APOBP04114 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC2.64□□□□□ -1.99
APOBP04114 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
APOBP04114 AC096664.2-201ENST00000411843 406 ntBASIC2.64□□□□□ -1.99
APOBP04114 PSAT1P4-201ENST00000466500 526 ntBASIC2.64□□□□□ -1.99
APOBP04114 RPS20P21-201ENST00000466859 343 ntBASIC2.64□□□□□ -1.99
APOBP04114 RPS4XP15-201ENST00000489210 795 ntBASIC2.64□□□□□ -1.99
APOBP04114 AC074250.1-201ENST00000511117 192 ntBASIC2.64□□□□□ -1.99
APOBP04114 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC2.64□□□□□ -1.99
APOBP04114 AP005205.1-201ENST00000563503 508 ntBASIC2.64□□□□□ -1.99
APOBP04114 AC005972.3-201ENST00000606304 481 ntBASIC2.64□□□□□ -1.99
APOBP04114 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC2.64□□□□□ -1.99
APOBP04114 MFSD8-236ENST00000641509 4050 ntBASIC2.64□□□□□ -1.99
APOBP04114 COBLL1-203ENST00000392717 9523 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms