Protein–RNA interactions for Protein: P02461

COL3A1, Collagen alpha-1(III) chain, humanhuman

Predicted RBP Predictions only

Length 1,466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1P02461 AP003399.1-201ENST00000637534 361 ntBASIC6.03□□□□□ -1.44
COL3A1P02461 AL445984.1-201ENST00000637834 659 ntBASIC6.03□□□□□ -1.44
COL3A1P02461 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
COL3A1P02461 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
COL3A1P02461 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC6.03□□□□□ -1.44
COL3A1P02461 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
COL3A1P02461 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
COL3A1P02461 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC6.03□□□□□ -1.44
COL3A1P02461 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
COL3A1P02461 MTND4P21-201ENST00000453886 1357 ntBASIC6.03□□□□□ -1.44
COL3A1P02461 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
COL3A1P02461 MIR921-201ENST00000401133 56 ntBASIC6.02□□□□□ -1.44
COL3A1P02461 MORF4L1P7-201ENST00000426038 703 ntBASIC6.02□□□□□ -1.44
COL3A1P02461 C4BPAP2-201ENST00000428434 478 ntBASIC6.02□□□□□ -1.44
COL3A1P02461 AC068287.1-201ENST00000430283 295 ntBASIC6.02□□□□□ -1.44
COL3A1P02461 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC6.02□□□□□ -1.44
COL3A1P02461 AC011242.1-201ENST00000433596 1158 ntBASIC6.02□□□□□ -1.44
COL3A1P02461 AC114878.1-201ENST00000441166 358 ntBASIC6.02□□□□□ -1.44
COL3A1P02461 TXNP2-201ENST00000443918 295 ntBASIC6.02□□□□□ -1.44
COL3A1P02461 MTND2P22-201ENST00000444325 1033 ntBASIC6.02□□□□□ -1.44
COL3A1P02461 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC6.02□□□□□ -1.44
COL3A1P02461 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC6.02□□□□□ -1.44
COL3A1P02461 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC6.02□□□□□ -1.44
COL3A1P02461 AL445433.1-201ENST00000457507 257 ntBASIC6.02□□□□□ -1.44
COL3A1P02461 AC011276.1-201ENST00000469688 323 ntBASIC6.02□□□□□ -1.44
COL3A1P02461 AC026979.1-201ENST00000492525 396 ntBASIC6.02□□□□□ -1.44
COL3A1P02461 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC6.02□□□□□ -1.44
COL3A1P02461 AP000827.1-201ENST00000527814 258 ntBASIC6.02□□□□□ -1.44
COL3A1P02461 ASB8-204ENST00000536071 568 ntTSL 4 BASIC6.02□□□□□ -1.44
COL3A1P02461 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC6.02□□□□□ -1.44
COL3A1P02461 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC6.02□□□□□ -1.44
COL3A1P02461 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC6.02□□□□□ -1.44
COL3A1P02461 AC093765.1-201ENST00000603758 881 ntBASIC6.02□□□□□ -1.44
COL3A1P02461 AC005191.1-201ENST00000603950 358 ntBASIC6.02□□□□□ -1.44
COL3A1P02461 AL121890.3-201ENST00000618494 516 ntBASIC6.02□□□□□ -1.44
COL3A1P02461 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
COL3A1P02461 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
COL3A1P02461 AC097461.1-201ENST00000568928 2821 ntBASIC6.02□□□□□ -1.45
COL3A1P02461 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
COL3A1P02461 AL355852.1-201ENST00000454081 1771 ntBASIC6.02□□□□□ -1.45
COL3A1P02461 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC6.02□□□□□ -1.45
COL3A1P02461 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
COL3A1P02461 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
COL3A1P02461 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC6.02□□□□□ -1.45
COL3A1P02461 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
COL3A1P02461 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
COL3A1P02461 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC6.02□□□□□ -1.45
COL3A1P02461 EI24P3-201ENST00000399046 1062 ntBASIC6.02□□□□□ -1.45
COL3A1P02461 SNORA74C-2-201ENST00000411179 201 ntBASIC6.02□□□□□ -1.45
COL3A1P02461 AL356387.2-201ENST00000422272 243 ntBASIC6.02□□□□□ -1.45
COL3A1P02461 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC6.02□□□□□ -1.45
COL3A1P02461 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC6.02□□□□□ -1.45
COL3A1P02461 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC6.02□□□□□ -1.45
COL3A1P02461 CBX1P1-201ENST00000440184 427 ntBASIC6.02□□□□□ -1.45
COL3A1P02461 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC6.02□□□□□ -1.45
COL3A1P02461 AC053481.1-201ENST00000467217 306 ntBASIC6.02□□□□□ -1.45
COL3A1P02461 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC6.02□□□□□ -1.45
COL3A1P02461 RPL23AP37-201ENST00000479658 549 ntBASIC6.02□□□□□ -1.45
COL3A1P02461 AGGF1P3-201ENST00000493675 1213 ntBASIC6.02□□□□□ -1.45
COL3A1P02461 RPS4XP18-201ENST00000495480 763 ntBASIC6.02□□□□□ -1.45
COL3A1P02461 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC6.02□□□□□ -1.45
COL3A1P02461 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC6.02□□□□□ -1.45
COL3A1P02461 AC096571.1-202ENST00000506634 735 ntBASIC6.02□□□□□ -1.45
COL3A1P02461 C1GALT1P2-201ENST00000510813 1104 ntBASIC6.02□□□□□ -1.45
COL3A1P02461 OR8A2P-201ENST00000528631 952 ntBASIC6.02□□□□□ -1.45
COL3A1P02461 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC6.02□□□□□ -1.45
COL3A1P02461 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC6.02□□□□□ -1.45
COL3A1P02461 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC6.02□□□□□ -1.45
COL3A1P02461 BPIFA4P-203ENST00000603168 689 ntBASIC6.02□□□□□ -1.45
COL3A1P02461 AL356218.2-201ENST00000605264 187 ntBASIC6.02□□□□□ -1.45
COL3A1P02461 AC090948.1-201ENST00000607464 549 ntBASIC6.02□□□□□ -1.45
COL3A1P02461 AC009464.1-201ENST00000615731 469 ntBASIC6.02□□□□□ -1.45
COL3A1P02461 AL035461.2-201ENST00000619201 524 ntBASIC6.02□□□□□ -1.45
COL3A1P02461 AC007546.1-201ENST00000619452 559 ntBASIC6.02□□□□□ -1.45
COL3A1P02461 AC026422.1-201ENST00000623961 452 ntBASIC6.02□□□□□ -1.45
COL3A1P02461 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
COL3A1P02461 AL513185.3-201ENST00000433335 1300 ntBASIC6.01□□□□□ -1.45
COL3A1P02461 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
COL3A1P02461 AC120338.1-201ENST00000625074 1541 ntBASIC6.01□□□□□ -1.45
COL3A1P02461 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC6.01□□□□□ -1.45
COL3A1P02461 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
COL3A1P02461 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
COL3A1P02461 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
COL3A1P02461 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
COL3A1P02461 RNA5SP509-201ENST00000364577 119 ntBASIC6.01□□□□□ -1.45
COL3A1P02461 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC6.01□□□□□ -1.45
COL3A1P02461 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC6.01□□□□□ -1.45
COL3A1P02461 RPEP2-201ENST00000432149 701 ntBASIC6.01□□□□□ -1.45
COL3A1P02461 AL162591.2-201ENST00000449634 317 ntBASIC6.01□□□□□ -1.45
COL3A1P02461 RPL5P16-201ENST00000471467 790 ntBASIC6.01□□□□□ -1.45
COL3A1P02461 RN7SL481P-201ENST00000477764 299 ntBASIC6.01□□□□□ -1.45
COL3A1P02461 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC6.01□□□□□ -1.45
COL3A1P02461 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC6.01□□□□□ -1.45
COL3A1P02461 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC6.01□□□□□ -1.45
COL3A1P02461 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC6.01□□□□□ -1.45
COL3A1P02461 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC6.01□□□□□ -1.45
COL3A1P02461 SNORA70.11-201ENST00000515987 138 ntBASIC6.01□□□□□ -1.45
COL3A1P02461 SNORA70.13-201ENST00000516116 138 ntBASIC6.01□□□□□ -1.45
COL3A1P02461 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC6.01□□□□□ -1.45
COL3A1P02461 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC6.01□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 110.4 ms