Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 MTND1P8-201ENST00000571424 950 ntBASIC4.76□□□□□ -1.65
NKX2-2O95096 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC4.76□□□□□ -1.65
NKX2-2O95096 MIR4509-3-201ENST00000578671 94 ntBASIC4.76□□□□□ -1.65
NKX2-2O95096 MIR4509-2-201ENST00000583920 94 ntBASIC4.76□□□□□ -1.65
NKX2-2O95096 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC4.76□□□□□ -1.65
NKX2-2O95096 VN1R84P-201ENST00000593697 235 ntBASIC4.76□□□□□ -1.65
NKX2-2O95096 AC019072.1-201ENST00000604535 1551 ntBASIC4.76□□□□□ -1.65
NKX2-2O95096 AL355816.2-201ENST00000610049 647 ntBASIC4.76□□□□□ -1.65
NKX2-2O95096 AC126915.2-201ENST00000610957 190 ntBASIC4.76□□□□□ -1.65
NKX2-2O95096 DUXAP10-204ENST00000612052 616 ntBASIC4.76□□□□□ -1.65
NKX2-2O95096 AC243654.2-201ENST00000612843 443 ntBASIC4.76□□□□□ -1.65
NKX2-2O95096 MIR4509-1-201ENST00000618224 94 ntBASIC4.76□□□□□ -1.65
NKX2-2O95096 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.76□□□□□ -1.65
NKX2-2O95096 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
NKX2-2O95096 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC4.76□□□□□ -1.65
NKX2-2O95096 MTCO1P6-201ENST00000481192 1384 ntBASIC4.76□□□□□ -1.65
NKX2-2O95096 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
NKX2-2O95096 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
NKX2-2O95096 AL445437.1-201ENST00000623157 3087 ntBASIC4.76□□□□□ -1.65
NKX2-2O95096 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
NKX2-2O95096 AL450345.1-202ENST00000605741 3881 ntBASIC4.75□□□□□ -1.65
NKX2-2O95096 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
NKX2-2O95096 OFD1P9Y-201ENST00000417699 1491 ntBASIC4.75□□□□□ -1.65
NKX2-2O95096 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC4.75□□□□□ -1.65
NKX2-2O95096 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
NKX2-2O95096 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC4.75□□□□□ -1.65
NKX2-2O95096 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.75□□□□□ -1.65
NKX2-2O95096 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
NKX2-2O95096 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC4.75□□□□□ -1.65
NKX2-2O95096 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
NKX2-2O95096 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC4.75□□□□□ -1.65
NKX2-2O95096 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC4.75□□□□□ -1.65
NKX2-2O95096 PABPC1P6-201ENST00000445594 1829 ntBASIC4.75□□□□□ -1.65
NKX2-2O95096 RN7SKP113-201ENST00000363891 295 ntBASIC4.75□□□□□ -1.65
NKX2-2O95096 SNORA2.3-201ENST00000383920 135 ntBASIC4.75□□□□□ -1.65
NKX2-2O95096 RNU6-549P-201ENST00000384433 107 ntBASIC4.75□□□□□ -1.65
NKX2-2O95096 MTATP6P31-201ENST00000406985 692 ntBASIC4.75□□□□□ -1.65
NKX2-2O95096 U3.32-201ENST00000408116 212 ntBASIC4.75□□□□□ -1.65
NKX2-2O95096 RN7SKP16-201ENST00000410180 299 ntBASIC4.75□□□□□ -1.65
NKX2-2O95096 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC4.75□□□□□ -1.65
NKX2-2O95096 OR13Z1P-201ENST00000416141 834 ntBASIC4.75□□□□□ -1.65
NKX2-2O95096 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
NKX2-2O95096 AC099336.2-201ENST00000422457 254 ntBASIC4.75□□□□□ -1.65
NKX2-2O95096 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC4.75□□□□□ -1.65
NKX2-2O95096 ELOCP10-201ENST00000440624 327 ntBASIC4.75□□□□□ -1.65
NKX2-2O95096 MTCO1P53-201ENST00000441633 699 ntBASIC4.75□□□□□ -1.65
NKX2-2O95096 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4.75□□□□□ -1.65
NKX2-2O95096 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC4.75□□□□□ -1.65
NKX2-2O95096 MTND2P8-201ENST00000450555 1025 ntBASIC4.75□□□□□ -1.65
NKX2-2O95096 AL389915.2-201ENST00000454576 441 ntBASIC4.75□□□□□ -1.65
NKX2-2O95096 AC099560.2-201ENST00000457554 255 ntBASIC4.75□□□□□ -1.65
NKX2-2O95096 RN7SL172P-201ENST00000460535 303 ntBASIC4.75□□□□□ -1.65
NKX2-2O95096 RPL6P9-201ENST00000466502 859 ntBASIC4.75□□□□□ -1.65
NKX2-2O95096 RN7SL441P-201ENST00000492388 296 ntBASIC4.75□□□□□ -1.65
NKX2-2O95096 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC4.75□□□□□ -1.65
NKX2-2O95096 AC010460.2-201ENST00000509054 677 ntBASIC4.75□□□□□ -1.65
NKX2-2O95096 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC4.75□□□□□ -1.65
NKX2-2O95096 AC119751.1-201ENST00000513357 765 ntBASIC4.75□□□□□ -1.65
NKX2-2O95096 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
NKX2-2O95096 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC4.75□□□□□ -1.65
NKX2-2O95096 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC4.75□□□□□ -1.65
NKX2-2O95096 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC4.75□□□□□ -1.65
NKX2-2O95096 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC4.75□□□□□ -1.65
NKX2-2O95096 AC087897.1-201ENST00000550134 156 ntBASIC4.75□□□□□ -1.65
NKX2-2O95096 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC4.75□□□□□ -1.65
NKX2-2O95096 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC4.75□□□□□ -1.65
NKX2-2O95096 AC023824.3-201ENST00000569003 562 ntBASIC4.75□□□□□ -1.65
NKX2-2O95096 AC019322.1-201ENST00000571869 389 ntBASIC4.75□□□□□ -1.65
NKX2-2O95096 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.75□□□□□ -1.65
NKX2-2O95096 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC4.75□□□□□ -1.65
NKX2-2O95096 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC4.75□□□□□ -1.65
NKX2-2O95096 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.75□□□□□ -1.65
NKX2-2O95096 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC4.75□□□□□ -1.65
NKX2-2O95096 ELOCP34-201ENST00000604436 327 ntBASIC4.75□□□□□ -1.65
NKX2-2O95096 Z82195.1-201ENST00000604558 398 ntBASIC4.75□□□□□ -1.65
NKX2-2O95096 AC073387.2-201ENST00000604797 784 ntBASIC4.75□□□□□ -1.65
NKX2-2O95096 AC010200.2-201ENST00000605098 235 ntBASIC4.75□□□□□ -1.65
NKX2-2O95096 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.75□□□□□ -1.65
NKX2-2O95096 AP002505.2-201ENST00000623585 696 ntBASIC4.75□□□□□ -1.65
NKX2-2O95096 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC4.75□□□□□ -1.65
NKX2-2O95096 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
NKX2-2O95096 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
NKX2-2O95096 AC104623.2-202ENST00000623477 4002 ntBASIC4.75□□□□□ -1.65
NKX2-2O95096 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC4.75□□□□□ -1.65
NKX2-2O95096 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
NKX2-2O95096 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
NKX2-2O95096 STX3-208ENST00000641815 3236 ntBASIC4.74□□□□□ -1.65
NKX2-2O95096 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC4.74□□□□□ -1.65
NKX2-2O95096 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
NKX2-2O95096 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
NKX2-2O95096 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
NKX2-2O95096 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
NKX2-2O95096 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC4.74□□□□□ -1.65
NKX2-2O95096 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
NKX2-2O95096 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
NKX2-2O95096 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC4.74□□□□□ -1.65
NKX2-2O95096 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
NKX2-2O95096 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
NKX2-2O95096 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
NKX2-2O95096 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms