Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC4.48□□□□□ -1.69
HCN1O60741 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.48□□□□□ -1.69
HCN1O60741 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
HCN1O60741 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC4.48□□□□□ -1.69
HCN1O60741 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.48□□□□□ -1.69
HCN1O60741 RNA5SP360-201ENST00000516555 118 ntBASIC4.48□□□□□ -1.69
HCN1O60741 OR8X1P-201ENST00000534542 869 ntBASIC4.48□□□□□ -1.69
HCN1O60741 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC4.48□□□□□ -1.69
HCN1O60741 CR383656.6-201ENST00000550518 394 ntBASIC4.48□□□□□ -1.69
HCN1O60741 AC063949.1-201ENST00000552900 865 ntBASIC4.48□□□□□ -1.69
HCN1O60741 UBE2FP2-201ENST00000566646 462 ntBASIC4.48□□□□□ -1.69
HCN1O60741 MTATP6P25-201ENST00000574491 261 ntBASIC4.48□□□□□ -1.69
HCN1O60741 AC091042.1-201ENST00000579213 173 ntBASIC4.48□□□□□ -1.69
HCN1O60741 IMMP1LP1-201ENST00000605170 488 ntBASIC4.48□□□□□ -1.69
HCN1O60741 AL391358.1-201ENST00000605342 190 ntBASIC4.48□□□□□ -1.69
HCN1O60741 AL356274.1-201ENST00000617064 410 ntBASIC4.48□□□□□ -1.69
HCN1O60741 AL590410.1-201ENST00000617925 333 ntBASIC4.48□□□□□ -1.69
HCN1O60741 AC019206.1-201ENST00000621938 425 ntBASIC4.48□□□□□ -1.69
HCN1O60741 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.48□□□□□ -1.69
HCN1O60741 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HCN1O60741 AL121950.1-201ENST00000624993 2077 ntBASIC4.48□□□□□ -1.69
HCN1O60741 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.48□□□□□ -1.69
HCN1O60741 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.48□□□□□ -1.69
HCN1O60741 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.48□□□□□ -1.69
HCN1O60741 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
HCN1O60741 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
HCN1O60741 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
HCN1O60741 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
HCN1O60741 AP000756.2-201ENST00000624168 2567 ntBASIC4.47□□□□□ -1.69
HCN1O60741 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
HCN1O60741 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC4.47□□□□□ -1.69
HCN1O60741 RNU6-670P-201ENST00000364312 104 ntBASIC4.47□□□□□ -1.69
HCN1O60741 AL592291.1-201ENST00000403830 352 ntBASIC4.47□□□□□ -1.69
HCN1O60741 RPS4XP9-201ENST00000405151 780 ntBASIC4.47□□□□□ -1.69
HCN1O60741 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.47□□□□□ -1.69
HCN1O60741 RNA5SP113-201ENST00000410486 84 ntBASIC4.47□□□□□ -1.69
HCN1O60741 RPL21P108-201ENST00000413857 481 ntBASIC4.47□□□□□ -1.69
HCN1O60741 AC009237.10-201ENST00000414112 510 ntBASIC4.47□□□□□ -1.69
HCN1O60741 GTF2IP5-201ENST00000414608 731 ntBASIC4.47□□□□□ -1.69
HCN1O60741 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.47□□□□□ -1.69
HCN1O60741 AC099336.2-201ENST00000422457 254 ntBASIC4.47□□□□□ -1.69
HCN1O60741 AC007064.3-201ENST00000422608 359 ntBASIC4.47□□□□□ -1.69
HCN1O60741 EIF4HP2-201ENST00000424380 563 ntBASIC4.47□□□□□ -1.69
HCN1O60741 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.47□□□□□ -1.69
HCN1O60741 AL392003.1-201ENST00000434394 243 ntBASIC4.47□□□□□ -1.69
HCN1O60741 AC093414.1-201ENST00000434712 514 ntBASIC4.47□□□□□ -1.69
HCN1O60741 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC4.47□□□□□ -1.69
HCN1O60741 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.47□□□□□ -1.69
HCN1O60741 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.47□□□□□ -1.69
HCN1O60741 SCAND3P1-201ENST00000439854 1060 ntBASIC4.47□□□□□ -1.69
HCN1O60741 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC4.47□□□□□ -1.69
HCN1O60741 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.47□□□□□ -1.69
HCN1O60741 RAB28P3-201ENST00000448325 597 ntBASIC4.47□□□□□ -1.69
HCN1O60741 EIF4A1P11-201ENST00000451239 222 ntBASIC4.47□□□□□ -1.69
HCN1O60741 AC005008.1-201ENST00000456151 612 ntBASIC4.47□□□□□ -1.69
HCN1O60741 AC099560.2-201ENST00000457554 255 ntBASIC4.47□□□□□ -1.69
HCN1O60741 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.47□□□□□ -1.69
HCN1O60741 AC063943.1-201ENST00000465434 453 ntBASIC4.47□□□□□ -1.69
HCN1O60741 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC4.47□□□□□ -1.69
HCN1O60741 MRPS33P2-201ENST00000507850 322 ntBASIC4.47□□□□□ -1.69
HCN1O60741 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.47□□□□□ -1.69
HCN1O60741 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC4.47□□□□□ -1.69
HCN1O60741 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC4.47□□□□□ -1.69
HCN1O60741 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC4.47□□□□□ -1.69
HCN1O60741 PDCD5P1-201ENST00000543528 309 ntBASIC4.47□□□□□ -1.69
HCN1O60741 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC4.47□□□□□ -1.69
HCN1O60741 MIR4270-201ENST00000581799 70 ntBASIC4.47□□□□□ -1.69
HCN1O60741 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC4.47□□□□□ -1.69
HCN1O60741 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
HCN1O60741 AL512782.1-201ENST00000603093 364 ntBASIC4.47□□□□□ -1.69
HCN1O60741 AC020910.3-201ENST00000603701 874 ntBASIC4.47□□□□□ -1.69
HCN1O60741 AC079298.2-201ENST00000623885 459 ntBASIC4.47□□□□□ -1.69
HCN1O60741 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC4.47□□□□□ -1.69
HCN1O60741 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.47□□□□□ -1.69
HCN1O60741 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.47□□□□□ -1.69
HCN1O60741 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.47□□□□□ -1.69
HCN1O60741 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.46□□□□□ -1.69
HCN1O60741 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.46□□□□□ -1.69
HCN1O60741 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.46□□□□□ -1.7
HCN1O60741 LINC01109-201ENST00000603837 3081 ntBASIC4.46□□□□□ -1.7
HCN1O60741 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.46□□□□□ -1.7
HCN1O60741 RMST-202ENST00000541282 2099 ntTSL 2 BASIC4.46□□□□□ -1.7
HCN1O60741 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
HCN1O60741 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
HCN1O60741 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
HCN1O60741 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
HCN1O60741 TRIM60P17-201ENST00000415181 719 ntBASIC4.46□□□□□ -1.7
HCN1O60741 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.46□□□□□ -1.7
HCN1O60741 AL590139.1-201ENST00000416267 400 ntBASIC4.46□□□□□ -1.7
HCN1O60741 FABP7P1-201ENST00000424004 391 ntBASIC4.46□□□□□ -1.7
HCN1O60741 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC4.46□□□□□ -1.7
HCN1O60741 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
HCN1O60741 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC4.46□□□□□ -1.7
HCN1O60741 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
HCN1O60741 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC4.46□□□□□ -1.7
HCN1O60741 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC4.46□□□□□ -1.7
HCN1O60741 OR1H1P-201ENST00000448731 937 ntBASIC4.46□□□□□ -1.7
HCN1O60741 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.46□□□□□ -1.7
HCN1O60741 EIF2S2P5-201ENST00000457635 968 ntBASIC4.46□□□□□ -1.7
HCN1O60741 AC116562.1-201ENST00000485355 781 ntBASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms