Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 AL158825.1-201ENST00000414735 521 ntBASIC4.59□□□□□ -1.67
PRKNO60260 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC4.59□□□□□ -1.67
PRKNO60260 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC4.59□□□□□ -1.67
PRKNO60260 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC4.59□□□□□ -1.67
PRKNO60260 RBMY2KP-201ENST00000418221 992 ntBASIC4.59□□□□□ -1.67
PRKNO60260 AC013429.2-201ENST00000418798 781 ntBASIC4.59□□□□□ -1.67
PRKNO60260 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC4.59□□□□□ -1.67
PRKNO60260 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC4.59□□□□□ -1.67
PRKNO60260 NDUFA5P10-201ENST00000432147 357 ntBASIC4.59□□□□□ -1.67
PRKNO60260 RPL12P18-201ENST00000437175 325 ntBASIC4.59□□□□□ -1.67
PRKNO60260 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC4.59□□□□□ -1.67
PRKNO60260 RPL5P25-201ENST00000441148 775 ntBASIC4.59□□□□□ -1.67
PRKNO60260 RRM2P4-201ENST00000441721 562 ntBASIC4.59□□□□□ -1.67
PRKNO60260 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC4.59□□□□□ -1.67
PRKNO60260 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC4.59□□□□□ -1.67
PRKNO60260 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC4.59□□□□□ -1.67
PRKNO60260 Z80107.2-201ENST00000445127 392 ntBASIC4.59□□□□□ -1.67
PRKNO60260 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.59□□□□□ -1.67
PRKNO60260 AC010733.1-201ENST00000451515 401 ntBASIC4.59□□□□□ -1.67
PRKNO60260 RPL23AP56-201ENST00000460778 453 ntBASIC4.59□□□□□ -1.67
PRKNO60260 RPL21P18-201ENST00000469899 480 ntBASIC4.59□□□□□ -1.67
PRKNO60260 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
PRKNO60260 AC083982.1-201ENST00000485679 344 ntBASIC4.59□□□□□ -1.67
PRKNO60260 RFESD-208ENST00000513950 464 ntTSL 5 BASIC4.59□□□□□ -1.67
PRKNO60260 UBE2Q2P10-201ENST00000514854 900 ntBASIC4.59□□□□□ -1.67
PRKNO60260 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC4.59□□□□□ -1.67
PRKNO60260 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.59□□□□□ -1.67
PRKNO60260 MTND2P32-201ENST00000521584 1038 ntBASIC4.59□□□□□ -1.67
PRKNO60260 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC4.59□□□□□ -1.67
PRKNO60260 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC4.59□□□□□ -1.67
PRKNO60260 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC4.59□□□□□ -1.67
PRKNO60260 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC4.59□□□□□ -1.67
PRKNO60260 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC4.59□□□□□ -1.67
PRKNO60260 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC4.59□□□□□ -1.67
PRKNO60260 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC4.59□□□□□ -1.67
PRKNO60260 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC4.59□□□□□ -1.67
PRKNO60260 AP000919.1-202ENST00000581139 1264 ntBASIC4.59□□□□□ -1.67
PRKNO60260 FAM106CP-201ENST00000582212 507 ntBASIC4.59□□□□□ -1.67
PRKNO60260 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.59□□□□□ -1.67
PRKNO60260 AC008536.1-201ENST00000602872 669 ntBASIC4.59□□□□□ -1.67
PRKNO60260 AL031320.1-201ENST00000604177 357 ntBASIC4.59□□□□□ -1.67
PRKNO60260 AC018695.5-201ENST00000605872 315 ntBASIC4.59□□□□□ -1.67
PRKNO60260 AL049539.1-201ENST00000611964 459 ntBASIC4.59□□□□□ -1.67
PRKNO60260 AC008432.1-201ENST00000615912 1320 ntBASIC4.59□□□□□ -1.67
PRKNO60260 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
PRKNO60260 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
PRKNO60260 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC4.59□□□□□ -1.67
PRKNO60260 AC093875.1-201ENST00000623688 504 ntBASIC4.59□□□□□ -1.67
PRKNO60260 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC4.59□□□□□ -1.67
PRKNO60260 AL590396.4-201ENST00000636779 956 ntBASIC4.59□□□□□ -1.67
PRKNO60260 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC4.59□□□□□ -1.67
PRKNO60260 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC4.59□□□□□ -1.68
PRKNO60260 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC4.59□□□□□ -1.68
PRKNO60260 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
PRKNO60260 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
PRKNO60260 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.59□□□□□ -1.68
PRKNO60260 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
PRKNO60260 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
PRKNO60260 AC002525.1-201ENST00000624392 1622 ntBASIC4.58□□□□□ -1.68
PRKNO60260 ECM1P2-201ENST00000503354 1577 ntBASIC4.58□□□□□ -1.68
PRKNO60260 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
PRKNO60260 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC4.58□□□□□ -1.68
PRKNO60260 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
PRKNO60260 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
PRKNO60260 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
PRKNO60260 UQCRC2P1-201ENST00000417777 1332 ntBASIC4.58□□□□□ -1.68
PRKNO60260 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
PRKNO60260 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
PRKNO60260 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
PRKNO60260 RN7SKP149-201ENST00000363008 344 ntBASIC4.58□□□□□ -1.68
PRKNO60260 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC4.58□□□□□ -1.68
PRKNO60260 RNU6-468P-201ENST00000384003 109 ntBASIC4.58□□□□□ -1.68
PRKNO60260 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
PRKNO60260 EI24P3-201ENST00000399046 1062 ntBASIC4.58□□□□□ -1.68
PRKNO60260 AL021331.1-201ENST00000402817 582 ntBASIC4.58□□□□□ -1.68
PRKNO60260 HMGB3P19-201ENST00000403971 560 ntBASIC4.58□□□□□ -1.68
PRKNO60260 ATF1P1-201ENST00000406040 927 ntBASIC4.58□□□□□ -1.68
PRKNO60260 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC4.58□□□□□ -1.68
PRKNO60260 RNU2-17P-201ENST00000410290 190 ntBASIC4.58□□□□□ -1.68
PRKNO60260 VN1R51P-201ENST00000411675 945 ntBASIC4.58□□□□□ -1.68
PRKNO60260 GTF2IP5-201ENST00000414608 731 ntBASIC4.58□□□□□ -1.68
PRKNO60260 TBCAP2-201ENST00000416175 326 ntBASIC4.58□□□□□ -1.68
PRKNO60260 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC4.58□□□□□ -1.68
PRKNO60260 GNG5P5-201ENST00000420444 220 ntBASIC4.58□□□□□ -1.68
PRKNO60260 AC241520.1-201ENST00000422654 1099 ntBASIC4.58□□□□□ -1.68
PRKNO60260 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC4.58□□□□□ -1.68
PRKNO60260 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC4.58□□□□□ -1.68
PRKNO60260 RPL6P5-201ENST00000445678 828 ntBASIC4.58□□□□□ -1.68
PRKNO60260 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
PRKNO60260 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
PRKNO60260 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC4.58□□□□□ -1.68
PRKNO60260 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC4.58□□□□□ -1.68
PRKNO60260 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
PRKNO60260 RPS17P11-201ENST00000474297 293 ntBASIC4.58□□□□□ -1.68
PRKNO60260 AC098583.1-201ENST00000480875 255 ntBASIC4.58□□□□□ -1.68
PRKNO60260 HMGB1P38-201ENST00000490557 577 ntBASIC4.58□□□□□ -1.68
PRKNO60260 AC010374.1-201ENST00000503762 1237 ntBASIC4.58□□□□□ -1.68
PRKNO60260 OR7H2P-201ENST00000513483 306 ntBASIC4.58□□□□□ -1.68
PRKNO60260 AC133963.2-201ENST00000513686 578 ntBASIC4.58□□□□□ -1.68
PRKNO60260 TBCA-207ENST00000520039 157 ntTSL 3 BASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 158.7 ms