Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC5.03□□□□□ -1.6
LDB2O43679 AC011840.5-201ENST00000582125 771 ntBASIC5.03□□□□□ -1.6
LDB2O43679 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC5.03□□□□□ -1.6
LDB2O43679 SNX6P1-201ENST00000601728 1224 ntBASIC5.03□□□□□ -1.6
LDB2O43679 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC5.03□□□□□ -1.6
LDB2O43679 AC093424.1-201ENST00000604999 338 ntBASIC5.03□□□□□ -1.6
LDB2O43679 AC009464.1-201ENST00000615731 469 ntBASIC5.03□□□□□ -1.6
LDB2O43679 AC009159.2-201ENST00000617603 606 ntBASIC5.03□□□□□ -1.6
LDB2O43679 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC5.03□□□□□ -1.6
LDB2O43679 TEX41-254ENST00000626394 423 ntTSL 5 BASIC5.03□□□□□ -1.6
LDB2O43679 RNF123-214ENST00000629802 207 ntTSL 5 BASIC5.03□□□□□ -1.6
LDB2O43679 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
LDB2O43679 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.03□□□□□ -1.6
LDB2O43679 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
LDB2O43679 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.03□□□□□ -1.6
LDB2O43679 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.03□□□□□ -1.6
LDB2O43679 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC5.03□□□□□ -1.6
LDB2O43679 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
LDB2O43679 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
LDB2O43679 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC5.03□□□□□ -1.6
LDB2O43679 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC5.03□□□□□ -1.6
LDB2O43679 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
LDB2O43679 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.03□□□□□ -1.61
LDB2O43679 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
LDB2O43679 MUC2-202ENST00000613187 4845 ntBASIC5.02□□□□□ -1.61
LDB2O43679 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC5.02□□□□□ -1.61
LDB2O43679 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
LDB2O43679 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.02□□□□□ -1.61
LDB2O43679 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC5.02□□□□□ -1.61
LDB2O43679 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
LDB2O43679 RN7SKP74-201ENST00000362849 309 ntBASIC5.02□□□□□ -1.61
LDB2O43679 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
LDB2O43679 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
LDB2O43679 AL645733.1-201ENST00000402250 217 ntBASIC5.02□□□□□ -1.61
LDB2O43679 MTATP6P20-201ENST00000414147 562 ntBASIC5.02□□□□□ -1.61
LDB2O43679 DEFB130D-201ENST00000426866 237 ntBASIC5.02□□□□□ -1.61
LDB2O43679 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC5.02□□□□□ -1.61
LDB2O43679 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC5.02□□□□□ -1.61
LDB2O43679 CETN4P-201ENST00000432407 469 ntBASIC5.02□□□□□ -1.61
LDB2O43679 MTND2P5-201ENST00000432656 1006 ntBASIC5.02□□□□□ -1.61
LDB2O43679 AL035246.1-201ENST00000433554 1255 ntBASIC5.02□□□□□ -1.61
LDB2O43679 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC5.02□□□□□ -1.61
LDB2O43679 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC5.02□□□□□ -1.61
LDB2O43679 MTCO1P53-201ENST00000441633 699 ntBASIC5.02□□□□□ -1.61
LDB2O43679 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC5.02□□□□□ -1.61
LDB2O43679 BTF3P6-201ENST00000448054 499 ntBASIC5.02□□□□□ -1.61
LDB2O43679 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC5.02□□□□□ -1.61
LDB2O43679 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC5.02□□□□□ -1.61
LDB2O43679 RPL5P13-201ENST00000462840 709 ntBASIC5.02□□□□□ -1.61
LDB2O43679 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC5.02□□□□□ -1.61
LDB2O43679 AC020699.1-201ENST00000505161 445 ntBASIC5.02□□□□□ -1.61
LDB2O43679 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC5.02□□□□□ -1.61
LDB2O43679 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC5.02□□□□□ -1.61
LDB2O43679 COX6B1P5-201ENST00000509843 249 ntBASIC5.02□□□□□ -1.61
LDB2O43679 AP001207.2-201ENST00000519490 539 ntBASIC5.02□□□□□ -1.61
LDB2O43679 RPL23AP53-201ENST00000521854 457 ntBASIC5.02□□□□□ -1.61
LDB2O43679 OR7E128P-201ENST00000532736 1024 ntBASIC5.02□□□□□ -1.61
LDB2O43679 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC5.02□□□□□ -1.61
LDB2O43679 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC5.02□□□□□ -1.61
LDB2O43679 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.02□□□□□ -1.61
LDB2O43679 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC5.02□□□□□ -1.61
LDB2O43679 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC5.02□□□□□ -1.61
LDB2O43679 AC006116.3-201ENST00000592968 361 ntBASIC5.02□□□□□ -1.61
LDB2O43679 AP002884.5-201ENST00000595053 1132 ntBASIC5.02□□□□□ -1.61
LDB2O43679 AC084373.1-201ENST00000603311 235 ntBASIC5.02□□□□□ -1.61
LDB2O43679 AC024940.4-201ENST00000605507 246 ntBASIC5.02□□□□□ -1.61
LDB2O43679 AL451049.1-201ENST00000608672 497 ntBASIC5.02□□□□□ -1.61
LDB2O43679 AL157392.4-201ENST00000609756 345 ntBASIC5.02□□□□□ -1.61
LDB2O43679 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC5.02□□□□□ -1.61
LDB2O43679 VN1R9P-201ENST00000614184 867 ntBASIC5.02□□□□□ -1.61
LDB2O43679 AC068870.2-201ENST00000620635 389 ntBASIC5.02□□□□□ -1.61
LDB2O43679 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC5.02□□□□□ -1.61
LDB2O43679 AC006963.1-201ENST00000624003 1052 ntBASIC5.02□□□□□ -1.61
LDB2O43679 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC5.02□□□□□ -1.61
LDB2O43679 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
LDB2O43679 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
LDB2O43679 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.02□□□□□ -1.61
LDB2O43679 HSPD1P11-201ENST00000508643 1702 ntBASIC5.02□□□□□ -1.61
LDB2O43679 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
LDB2O43679 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.02□□□□□ -1.61
LDB2O43679 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
LDB2O43679 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
LDB2O43679 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
LDB2O43679 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
LDB2O43679 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
LDB2O43679 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.01□□□□□ -1.61
LDB2O43679 AC133552.1-201ENST00000569988 4007 ntBASIC5.01□□□□□ -1.61
LDB2O43679 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
LDB2O43679 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC5.01□□□□□ -1.61
LDB2O43679 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
LDB2O43679 MFSD8-213ENST00000641134 1327 ntBASIC5.01□□□□□ -1.61
LDB2O43679 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC5.01□□□□□ -1.61
LDB2O43679 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.01□□□□□ -1.61
LDB2O43679 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
LDB2O43679 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC5.01□□□□□ -1.61
LDB2O43679 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
LDB2O43679 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
LDB2O43679 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
LDB2O43679 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC5.01□□□□□ -1.61
LDB2O43679 SNORA70.10-201ENST00000384515 134 ntBASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms