Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 RNA5SP394-201ENST00000364216 119 ntBASIC5.36□□□□□ -1.55
PROM1O43490 RNA5SP30-201ENST00000365552 115 ntBASIC5.36□□□□□ -1.55
PROM1O43490 RNU6-413P-201ENST00000384115 107 ntBASIC5.36□□□□□ -1.55
PROM1O43490 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
PROM1O43490 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC5.36□□□□□ -1.55
PROM1O43490 AC096921.1-201ENST00000411661 375 ntBASIC5.36□□□□□ -1.55
PROM1O43490 MTND4P22-201ENST00000413116 1169 ntBASIC5.36□□□□□ -1.55
PROM1O43490 TAF13P2-201ENST00000416876 286 ntBASIC5.36□□□□□ -1.55
PROM1O43490 Z75741.2-201ENST00000417272 1167 ntBASIC5.36□□□□□ -1.55
PROM1O43490 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.36□□□□□ -1.55
PROM1O43490 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
PROM1O43490 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.36□□□□□ -1.55
PROM1O43490 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC5.36□□□□□ -1.55
PROM1O43490 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.36□□□□□ -1.55
PROM1O43490 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC5.36□□□□□ -1.55
PROM1O43490 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC5.36□□□□□ -1.55
PROM1O43490 MTND5P2-201ENST00000442927 1142 ntBASIC5.36□□□□□ -1.55
PROM1O43490 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC5.36□□□□□ -1.55
PROM1O43490 AC097499.1-201ENST00000444277 208 ntBASIC5.36□□□□□ -1.55
PROM1O43490 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC5.36□□□□□ -1.55
PROM1O43490 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC5.36□□□□□ -1.55
PROM1O43490 AC022431.1-201ENST00000450941 438 ntBASIC5.36□□□□□ -1.55
PROM1O43490 AC234781.3-201ENST00000452540 973 ntBASIC5.36□□□□□ -1.55
PROM1O43490 SBDSP1-204ENST00000453858 737 ntBASIC5.36□□□□□ -1.55
PROM1O43490 RPS27AP2-201ENST00000457576 465 ntBASIC5.36□□□□□ -1.55
PROM1O43490 RPS23P6-201ENST00000466136 431 ntBASIC5.36□□□□□ -1.55
PROM1O43490 MTND3P7-201ENST00000474435 343 ntBASIC5.36□□□□□ -1.55
PROM1O43490 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC5.36□□□□□ -1.55
PROM1O43490 OR7E157P-201ENST00000494376 911 ntBASIC5.36□□□□□ -1.55
PROM1O43490 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.36□□□□□ -1.55
PROM1O43490 XKRY-201ENST00000510392 1100 ntBASIC5.36□□□□□ -1.55
PROM1O43490 NDUFB4P12-201ENST00000513465 390 ntBASIC5.36□□□□□ -1.55
PROM1O43490 ATP5LP3-201ENST00000514223 304 ntBASIC5.36□□□□□ -1.55
PROM1O43490 MRPS16P1-201ENST00000523462 412 ntBASIC5.36□□□□□ -1.55
PROM1O43490 PDCL2P2-201ENST00000533651 189 ntBASIC5.36□□□□□ -1.55
PROM1O43490 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC5.36□□□□□ -1.55
PROM1O43490 ERP27-202ENST00000540097 993 ntTSL 2 BASIC5.36□□□□□ -1.55
PROM1O43490 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC5.36□□□□□ -1.55
PROM1O43490 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC5.36□□□□□ -1.55
PROM1O43490 AC079600.1-201ENST00000550326 297 ntBASIC5.36□□□□□ -1.55
PROM1O43490 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
PROM1O43490 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC5.36□□□□□ -1.55
PROM1O43490 HSPE1P2-201ENST00000554777 306 ntBASIC5.36□□□□□ -1.55
PROM1O43490 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC5.36□□□□□ -1.55
PROM1O43490 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC5.36□□□□□ -1.55
PROM1O43490 SULT1C2P2-201ENST00000562517 294 ntBASIC5.36□□□□□ -1.55
PROM1O43490 AC009852.2-201ENST00000567898 485 ntBASIC5.36□□□□□ -1.55
PROM1O43490 AC103987.3-201ENST00000582071 292 ntBASIC5.36□□□□□ -1.55
PROM1O43490 OR7E18P-201ENST00000592589 702 ntBASIC5.36□□□□□ -1.55
PROM1O43490 AC010487.1-201ENST00000594408 1172 ntBASIC5.36□□□□□ -1.55
PROM1O43490 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC5.36□□□□□ -1.55
PROM1O43490 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.36□□□□□ -1.55
PROM1O43490 AL583856.2-201ENST00000606298 543 ntBASIC5.36□□□□□ -1.55
PROM1O43490 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC5.36□□□□□ -1.55
PROM1O43490 SDR42E1P1-201ENST00000611327 477 ntBASIC5.36□□□□□ -1.55
PROM1O43490 AL354976.1-201ENST00000613843 387 ntBASIC5.36□□□□□ -1.55
PROM1O43490 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC5.36□□□□□ -1.55
PROM1O43490 AC139769.3-201ENST00000618383 175 ntBASIC5.36□□□□□ -1.55
PROM1O43490 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC5.36□□□□□ -1.55
PROM1O43490 AC068792.1-201ENST00000621354 417 ntBASIC5.36□□□□□ -1.55
PROM1O43490 AC010435.1-201ENST00000623353 1177 ntBASIC5.36□□□□□ -1.55
PROM1O43490 AC091931.1-201ENST00000623488 728 ntBASIC5.36□□□□□ -1.55
PROM1O43490 AC138965.3-201ENST00000623875 498 ntBASIC5.36□□□□□ -1.55
PROM1O43490 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
PROM1O43490 AL049536.1-201ENST00000625043 744 ntBASIC5.36□□□□□ -1.55
PROM1O43490 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
PROM1O43490 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC5.36□□□□□ -1.55
PROM1O43490 AC087565.3-203ENST00000641018 837 ntBASIC5.36□□□□□ -1.55
PROM1O43490 AC111188.2-201ENST00000529697 1387 ntBASIC5.36□□□□□ -1.55
PROM1O43490 EEF1A1P33-201ENST00000554413 1362 ntBASIC5.36□□□□□ -1.55
PROM1O43490 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
PROM1O43490 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC5.36□□□□□ -1.55
PROM1O43490 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
PROM1O43490 AC019072.1-201ENST00000604535 1551 ntBASIC5.36□□□□□ -1.55
PROM1O43490 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
PROM1O43490 AC002525.1-201ENST00000624392 1622 ntBASIC5.36□□□□□ -1.55
PROM1O43490 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
PROM1O43490 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
PROM1O43490 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
PROM1O43490 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
PROM1O43490 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
PROM1O43490 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
PROM1O43490 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
PROM1O43490 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
PROM1O43490 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
PROM1O43490 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
PROM1O43490 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
PROM1O43490 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.35□□□□□ -1.55
PROM1O43490 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
PROM1O43490 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC5.35□□□□□ -1.55
PROM1O43490 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.35□□□□□ -1.55
PROM1O43490 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.35□□□□□ -1.55
PROM1O43490 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
PROM1O43490 AC104446.1-201ENST00000613728 1321 ntBASIC5.35□□□□□ -1.55
PROM1O43490 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.35□□□□□ -1.55
PROM1O43490 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
PROM1O43490 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
PROM1O43490 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
PROM1O43490 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC5.35□□□□□ -1.55
PROM1O43490 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms