Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
LSM1O15116 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.57□□□□□ -1.68
LSM1O15116 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
LSM1O15116 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.57□□□□□ -1.68
LSM1O15116 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
LSM1O15116 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.56□□□□□ -1.68
LSM1O15116 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.56□□□□□ -1.68
LSM1O15116 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
LSM1O15116 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
LSM1O15116 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC4.56□□□□□ -1.68
LSM1O15116 U3.30-201ENST00000391308 210 ntBASIC4.56□□□□□ -1.68
LSM1O15116 AL590762.2-201ENST00000395798 571 ntBASIC4.56□□□□□ -1.68
LSM1O15116 AL034403.1-201ENST00000399414 885 ntBASIC4.56□□□□□ -1.68
LSM1O15116 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC4.56□□□□□ -1.68
LSM1O15116 AC114755.2-201ENST00000413520 361 ntBASIC4.56□□□□□ -1.68
LSM1O15116 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC4.56□□□□□ -1.68
LSM1O15116 AC004552.1-201ENST00000419089 348 ntBASIC4.56□□□□□ -1.68
LSM1O15116 SKP1P3-201ENST00000429280 487 ntBASIC4.56□□□□□ -1.68
LSM1O15116 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.56□□□□□ -1.68
LSM1O15116 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC4.56□□□□□ -1.68
LSM1O15116 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC4.56□□□□□ -1.68
LSM1O15116 CCRL1P1-201ENST00000449542 1053 ntBASIC4.56□□□□□ -1.68
LSM1O15116 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.56□□□□□ -1.68
LSM1O15116 RPS26P3-201ENST00000470205 348 ntBASIC4.56□□□□□ -1.68
LSM1O15116 RN7SL817P-201ENST00000480777 288 ntBASIC4.56□□□□□ -1.68
LSM1O15116 AC090543.2-201ENST00000483963 348 ntBASIC4.56□□□□□ -1.68
LSM1O15116 AC004057.1-201ENST00000485827 348 ntBASIC4.56□□□□□ -1.68
LSM1O15116 AK4P6-201ENST00000505168 528 ntBASIC4.56□□□□□ -1.68
LSM1O15116 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
LSM1O15116 RN7SKP147-201ENST00000517154 244 ntBASIC4.56□□□□□ -1.68
LSM1O15116 AC013701.1-201ENST00000522657 465 ntBASIC4.56□□□□□ -1.68
LSM1O15116 RGS5-219ENST00000528019 512 ntTSL 4 BASIC4.56□□□□□ -1.68
LSM1O15116 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC4.56□□□□□ -1.68
LSM1O15116 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC4.56□□□□□ -1.68
LSM1O15116 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC4.56□□□□□ -1.68
LSM1O15116 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
LSM1O15116 MIR3691-201ENST00000578066 90 ntBASIC4.56□□□□□ -1.68
LSM1O15116 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC4.56□□□□□ -1.68
LSM1O15116 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC4.56□□□□□ -1.68
LSM1O15116 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC4.56□□□□□ -1.68
LSM1O15116 AC005520.3-201ENST00000602874 370 ntBASIC4.56□□□□□ -1.68
LSM1O15116 AC090948.2-201ENST00000607363 564 ntBASIC4.56□□□□□ -1.68
LSM1O15116 AC019131.2-201ENST00000609071 870 ntBASIC4.56□□□□□ -1.68
LSM1O15116 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC4.56□□□□□ -1.68
LSM1O15116 AC005086.4-201ENST00000623065 213 ntBASIC4.56□□□□□ -1.68
LSM1O15116 BANCR-201ENST00000624238 473 ntTSL 2 BASIC4.56□□□□□ -1.68
LSM1O15116 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.56□□□□□ -1.68
LSM1O15116 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.56□□□□□ -1.68
LSM1O15116 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.56□□□□□ -1.68
LSM1O15116 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
LSM1O15116 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
LSM1O15116 AL590763.1-201ENST00000398297 1545 ntBASIC4.56□□□□□ -1.68
LSM1O15116 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.56□□□□□ -1.68
LSM1O15116 AP000756.2-201ENST00000624168 2567 ntBASIC4.56□□□□□ -1.68
LSM1O15116 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
LSM1O15116 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC4.55□□□□□ -1.68
LSM1O15116 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
LSM1O15116 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC4.55□□□□□ -1.68
LSM1O15116 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.55□□□□□ -1.68
LSM1O15116 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
LSM1O15116 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.55□□□□□ -1.68
LSM1O15116 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
LSM1O15116 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.55□□□□□ -1.68
LSM1O15116 AC008725.1-201ENST00000605123 2263 ntBASIC4.55□□□□□ -1.68
LSM1O15116 AC010132.2-201ENST00000295493 1043 ntBASIC4.55□□□□□ -1.68
LSM1O15116 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
LSM1O15116 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
LSM1O15116 RN7SKP95-201ENST00000362860 303 ntBASIC4.55□□□□□ -1.68
LSM1O15116 MIR921-201ENST00000401133 56 ntBASIC4.55□□□□□ -1.68
LSM1O15116 RNU6ATAC7P-201ENST00000408111 127 ntBASIC4.55□□□□□ -1.68
LSM1O15116 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC4.55□□□□□ -1.68
LSM1O15116 TRIM60P17-201ENST00000415181 719 ntBASIC4.55□□□□□ -1.68
LSM1O15116 OR2AM1P-201ENST00000422137 422 ntBASIC4.55□□□□□ -1.68
LSM1O15116 AC004448.2-201ENST00000422360 586 ntBASIC4.55□□□□□ -1.68
LSM1O15116 Z74021.1-201ENST00000423610 407 ntBASIC4.55□□□□□ -1.68
LSM1O15116 RPS6P12-201ENST00000432491 726 ntBASIC4.55□□□□□ -1.68
LSM1O15116 AL353597.2-202ENST00000434901 373 ntBASIC4.55□□□□□ -1.68
LSM1O15116 EEF1A1P1-201ENST00000447052 739 ntBASIC4.55□□□□□ -1.68
LSM1O15116 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC4.55□□□□□ -1.68
LSM1O15116 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC4.55□□□□□ -1.68
LSM1O15116 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC4.55□□□□□ -1.68
LSM1O15116 AC109462.1-201ENST00000491087 368 ntBASIC4.55□□□□□ -1.68
LSM1O15116 AC104971.1-201ENST00000495117 578 ntBASIC4.55□□□□□ -1.68
LSM1O15116 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC4.55□□□□□ -1.68
LSM1O15116 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
LSM1O15116 RNA5SP154-201ENST00000516193 111 ntBASIC4.55□□□□□ -1.68
LSM1O15116 RNA5SP92-201ENST00000516437 110 ntBASIC4.55□□□□□ -1.68
LSM1O15116 RN7SKP66-201ENST00000516681 231 ntBASIC4.55□□□□□ -1.68
LSM1O15116 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC4.55□□□□□ -1.68
LSM1O15116 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC4.55□□□□□ -1.68
LSM1O15116 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC4.55□□□□□ -1.68
LSM1O15116 AC135001.1-201ENST00000544546 283 ntBASIC4.55□□□□□ -1.68
LSM1O15116 AC090515.3-201ENST00000560431 315 ntBASIC4.55□□□□□ -1.68
LSM1O15116 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC4.55□□□□□ -1.68
LSM1O15116 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC4.55□□□□□ -1.68
LSM1O15116 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC4.55□□□□□ -1.68
LSM1O15116 AC209154.1-201ENST00000582156 337 ntBASIC4.55□□□□□ -1.68
LSM1O15116 AC022726.1-201ENST00000587475 207 ntBASIC4.55□□□□□ -1.68
LSM1O15116 AC009163.6-201ENST00000612367 342 ntBASIC4.55□□□□□ -1.68
LSM1O15116 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms