Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.24□□□□□ -1.73
UPK1AO00322 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.24□□□□□ -1.73
UPK1AO00322 MAPK10-320ENST00000641462 6696 ntBASIC4.24□□□□□ -1.73
UPK1AO00322 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
UPK1AO00322 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
UPK1AO00322 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC4.24□□□□□ -1.73
UPK1AO00322 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC4.24□□□□□ -1.73
UPK1AO00322 RNU1-63P-201ENST00000383902 164 ntBASIC4.24□□□□□ -1.73
UPK1AO00322 MIR513A2-201ENST00000385249 127 ntBASIC4.24□□□□□ -1.73
UPK1AO00322 RNA5SP397-201ENST00000391323 118 ntBASIC4.24□□□□□ -1.73
UPK1AO00322 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC4.24□□□□□ -1.73
UPK1AO00322 AL035419.1-201ENST00000397037 564 ntBASIC4.24□□□□□ -1.73
UPK1AO00322 SDHCP2-201ENST00000398565 501 ntBASIC4.24□□□□□ -1.73
UPK1AO00322 AL078604.1-201ENST00000404609 466 ntBASIC4.24□□□□□ -1.73
UPK1AO00322 FCF1P5-201ENST00000406490 482 ntBASIC4.24□□□□□ -1.73
UPK1AO00322 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC4.24□□□□□ -1.73
UPK1AO00322 RAD23BP1-201ENST00000421404 1227 ntBASIC4.24□□□□□ -1.73
UPK1AO00322 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.24□□□□□ -1.73
UPK1AO00322 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.24□□□□□ -1.73
UPK1AO00322 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.24□□□□□ -1.73
UPK1AO00322 CEACAMP6-201ENST00000452007 574 ntBASIC4.24□□□□□ -1.73
UPK1AO00322 RPL5P30-201ENST00000465511 891 ntBASIC4.24□□□□□ -1.73
UPK1AO00322 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.24□□□□□ -1.73
UPK1AO00322 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.24□□□□□ -1.73
UPK1AO00322 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.24□□□□□ -1.73
UPK1AO00322 AC006499.6-201ENST00000511169 607 ntBASIC4.24□□□□□ -1.73
UPK1AO00322 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC4.24□□□□□ -1.73
UPK1AO00322 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.24□□□□□ -1.73
UPK1AO00322 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC4.24□□□□□ -1.73
UPK1AO00322 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC4.24□□□□□ -1.73
UPK1AO00322 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC4.24□□□□□ -1.73
UPK1AO00322 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC4.24□□□□□ -1.73
UPK1AO00322 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC4.24□□□□□ -1.73
UPK1AO00322 AC068790.7-201ENST00000602347 528 ntBASIC4.24□□□□□ -1.73
UPK1AO00322 AC008638.3-201ENST00000603341 463 ntBASIC4.24□□□□□ -1.73
UPK1AO00322 AL031666.3-201ENST00000609320 1006 ntBASIC4.24□□□□□ -1.73
UPK1AO00322 AL138721.1-201ENST00000616756 179 ntBASIC4.24□□□□□ -1.73
UPK1AO00322 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.24□□□□□ -1.73
UPK1AO00322 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC4.24□□□□□ -1.73
UPK1AO00322 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC4.24□□□□□ -1.73
UPK1AO00322 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
UPK1AO00322 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
UPK1AO00322 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
UPK1AO00322 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
UPK1AO00322 NOL8P1-201ENST00000508336 3529 ntBASIC4.24□□□□□ -1.73
UPK1AO00322 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.23□□□□□ -1.73
UPK1AO00322 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
UPK1AO00322 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.23□□□□□ -1.73
UPK1AO00322 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.23□□□□□ -1.73
UPK1AO00322 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.23□□□□□ -1.73
UPK1AO00322 CPHL1P-201ENST00000461341 3407 ntBASIC4.23□□□□□ -1.73
UPK1AO00322 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
UPK1AO00322 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
UPK1AO00322 MIR448-201ENST00000362131 111 ntBASIC4.23□□□□□ -1.73
UPK1AO00322 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.23□□□□□ -1.73
UPK1AO00322 SNORA70F-201ENST00000384142 135 ntBASIC4.23□□□□□ -1.73
UPK1AO00322 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC4.23□□□□□ -1.73
UPK1AO00322 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
UPK1AO00322 RNU2-22P-201ENST00000411266 212 ntBASIC4.23□□□□□ -1.73
UPK1AO00322 CENPIP1-201ENST00000425713 902 ntBASIC4.23□□□□□ -1.73
UPK1AO00322 AC006466.1-201ENST00000438721 289 ntBASIC4.23□□□□□ -1.73
UPK1AO00322 RPL23AP93-201ENST00000440847 484 ntBASIC4.23□□□□□ -1.73
UPK1AO00322 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC4.23□□□□□ -1.73
UPK1AO00322 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC4.23□□□□□ -1.73
UPK1AO00322 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC4.23□□□□□ -1.73
UPK1AO00322 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.23□□□□□ -1.73
UPK1AO00322 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC4.23□□□□□ -1.73
UPK1AO00322 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC4.23□□□□□ -1.73
UPK1AO00322 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
UPK1AO00322 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.23□□□□□ -1.73
UPK1AO00322 AL358913.1-201ENST00000554342 121 ntBASIC4.23□□□□□ -1.73
UPK1AO00322 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.23□□□□□ -1.73
UPK1AO00322 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC4.23□□□□□ -1.73
UPK1AO00322 BPIFA4P-203ENST00000603168 689 ntBASIC4.23□□□□□ -1.73
UPK1AO00322 AC103792.1-201ENST00000603591 919 ntBASIC4.23□□□□□ -1.73
UPK1AO00322 QTRT1P1-201ENST00000604344 1078 ntBASIC4.23□□□□□ -1.73
UPK1AO00322 Mico1.1-201ENST00000611698 204 ntBASIC4.23□□□□□ -1.73
UPK1AO00322 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.23□□□□□ -1.73
UPK1AO00322 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.23□□□□□ -1.73
UPK1AO00322 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
UPK1AO00322 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.23□□□□□ -1.73
UPK1AO00322 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
UPK1AO00322 LINC00622-201ENST00000562811 1570 ntBASIC4.23□□□□□ -1.73
UPK1AO00322 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
UPK1AO00322 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
UPK1AO00322 AC016588.2-201ENST00000632484 3021 ntBASIC4.22□□□□□ -1.73
UPK1AO00322 VN2R3P-201ENST00000422626 1412 ntBASIC4.22□□□□□ -1.73
UPK1AO00322 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC4.22□□□□□ -1.73
UPK1AO00322 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
UPK1AO00322 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.22□□□□□ -1.73
UPK1AO00322 NXPH1-205ENST00000602349 1953 ntBASIC4.22□□□□□ -1.73
UPK1AO00322 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.22□□□□□ -1.73
UPK1AO00322 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
UPK1AO00322 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
UPK1AO00322 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
UPK1AO00322 RN7SKP103-201ENST00000363848 320 ntBASIC4.22□□□□□ -1.73
UPK1AO00322 MIR659-201ENST00000384963 97 ntBASIC4.22□□□□□ -1.73
UPK1AO00322 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.22□□□□□ -1.73
UPK1AO00322 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.22□□□□□ -1.73
UPK1AO00322 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 125.3 ms