Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 NDUFB4P11-201ENST00000560510 395 ntBASIC4.09□□□□□ -1.75
SRRM4A7MD48 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.09□□□□□ -1.75
SRRM4A7MD48 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.09□□□□□ -1.75
SRRM4A7MD48 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC4.09□□□□□ -1.75
SRRM4A7MD48 AP002906.1-201ENST00000603405 233 ntBASIC4.09□□□□□ -1.75
SRRM4A7MD48 AC096586.1-201ENST00000610267 561 ntBASIC4.09□□□□□ -1.75
SRRM4A7MD48 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC4.09□□□□□ -1.75
SRRM4A7MD48 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.09□□□□□ -1.75
SRRM4A7MD48 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC4.09□□□□□ -1.75
SRRM4A7MD48 OR52B5P-202ENST00000641118 1110 ntBASIC4.09□□□□□ -1.75
SRRM4A7MD48 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
SRRM4A7MD48 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
SRRM4A7MD48 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC4.09□□□□□ -1.76
SRRM4A7MD48 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
SRRM4A7MD48 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
SRRM4A7MD48 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
SRRM4A7MD48 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
SRRM4A7MD48 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
SRRM4A7MD48 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.08□□□□□ -1.76
SRRM4A7MD48 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
SRRM4A7MD48 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
SRRM4A7MD48 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
SRRM4A7MD48 AC017079.1-201ENST00000333650 415 ntBASIC4.08□□□□□ -1.76
SRRM4A7MD48 USP45-204ENST00000369233 2514 ntTSL 5 BASIC4.08□□□□□ -1.76
SRRM4A7MD48 AC234772.1-201ENST00000377927 937 ntBASIC4.08□□□□□ -1.76
SRRM4A7MD48 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SRRM4A7MD48 SNORA51.12-201ENST00000384448 134 ntBASIC4.08□□□□□ -1.76
SRRM4A7MD48 MIR525-201ENST00000384978 85 ntBASIC4.08□□□□□ -1.76
SRRM4A7MD48 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC4.08□□□□□ -1.76
SRRM4A7MD48 VDAC2P1-201ENST00000399358 958 ntBASIC4.08□□□□□ -1.76
SRRM4A7MD48 HMGB3P18-201ENST00000406327 590 ntBASIC4.08□□□□□ -1.76
SRRM4A7MD48 DUTP5-201ENST00000406790 469 ntBASIC4.08□□□□□ -1.76
SRRM4A7MD48 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC4.08□□□□□ -1.76
SRRM4A7MD48 AC007738.1-201ENST00000413892 348 ntBASIC4.08□□□□□ -1.76
SRRM4A7MD48 UQCRC2P1-201ENST00000417777 1332 ntBASIC4.08□□□□□ -1.76
SRRM4A7MD48 AC013429.2-201ENST00000418798 781 ntBASIC4.08□□□□□ -1.76
SRRM4A7MD48 SLC35E1P1-201ENST00000419313 864 ntBASIC4.08□□□□□ -1.76
SRRM4A7MD48 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC4.08□□□□□ -1.76
SRRM4A7MD48 USP9YP4-201ENST00000424401 1745 ntBASIC4.08□□□□□ -1.76
SRRM4A7MD48 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC4.08□□□□□ -1.76
SRRM4A7MD48 HNRNPA3P4-201ENST00000427514 803 ntBASIC4.08□□□□□ -1.76
SRRM4A7MD48 MRPL50P1-201ENST00000431951 384 ntBASIC4.08□□□□□ -1.76
SRRM4A7MD48 AL389925.1-201ENST00000432257 728 ntBASIC4.08□□□□□ -1.76
SRRM4A7MD48 RPL34P6-201ENST00000432390 345 ntBASIC4.08□□□□□ -1.76
SRRM4A7MD48 BX323845.1-201ENST00000432417 179 ntBASIC4.08□□□□□ -1.76
SRRM4A7MD48 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
SRRM4A7MD48 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.08□□□□□ -1.76
SRRM4A7MD48 RPL35AP21-201ENST00000437667 333 ntBASIC4.08□□□□□ -1.76
SRRM4A7MD48 ACTR3P2-201ENST00000439585 1257 ntBASIC4.08□□□□□ -1.76
SRRM4A7MD48 TXNP5-201ENST00000441043 315 ntBASIC4.08□□□□□ -1.76
SRRM4A7MD48 AC245047.2-201ENST00000441060 530 ntBASIC4.08□□□□□ -1.76
SRRM4A7MD48 AC068135.1-201ENST00000446164 246 ntBASIC4.08□□□□□ -1.76
SRRM4A7MD48 AL096803.2-201ENST00000450032 677 ntBASIC4.08□□□□□ -1.76
SRRM4A7MD48 AC239809.1-201ENST00000450470 217 ntBASIC4.08□□□□□ -1.76
SRRM4A7MD48 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
SRRM4A7MD48 GTF2IP12-201ENST00000456547 356 ntBASIC4.08□□□□□ -1.76
SRRM4A7MD48 TPT1P1-201ENST00000458495 518 ntBASIC4.08□□□□□ -1.76
SRRM4A7MD48 AC006511.1-201ENST00000470614 315 ntBASIC4.08□□□□□ -1.76
SRRM4A7MD48 RPL23AP71-201ENST00000470966 469 ntBASIC4.08□□□□□ -1.76
SRRM4A7MD48 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.08□□□□□ -1.76
SRRM4A7MD48 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC4.08□□□□□ -1.76
SRRM4A7MD48 RN7SL441P-201ENST00000492388 296 ntBASIC4.08□□□□□ -1.76
SRRM4A7MD48 RN7SL101P-201ENST00000496350 279 ntBASIC4.08□□□□□ -1.76
SRRM4A7MD48 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
SRRM4A7MD48 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.08□□□□□ -1.76
SRRM4A7MD48 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC4.08□□□□□ -1.76
SRRM4A7MD48 AC008565.1-201ENST00000509046 885 ntBASIC4.08□□□□□ -1.76
SRRM4A7MD48 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.08□□□□□ -1.76
SRRM4A7MD48 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.08□□□□□ -1.76
SRRM4A7MD48 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC4.08□□□□□ -1.76
SRRM4A7MD48 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC4.08□□□□□ -1.76
SRRM4A7MD48 MAL2-208ENST00000523307 556 ntTSL 4 BASIC4.08□□□□□ -1.76
SRRM4A7MD48 AC083923.1-201ENST00000523708 376 ntBASIC4.08□□□□□ -1.76
SRRM4A7MD48 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC4.08□□□□□ -1.76
SRRM4A7MD48 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC4.08□□□□□ -1.76
SRRM4A7MD48 AC024940.3-201ENST00000538551 316 ntBASIC4.08□□□□□ -1.76
SRRM4A7MD48 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC4.08□□□□□ -1.76
SRRM4A7MD48 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC4.08□□□□□ -1.76
SRRM4A7MD48 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC4.08□□□□□ -1.76
SRRM4A7MD48 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC4.08□□□□□ -1.76
SRRM4A7MD48 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
SRRM4A7MD48 AC090751.1-201ENST00000566966 267 ntBASIC4.08□□□□□ -1.76
SRRM4A7MD48 MTND4LP24-201ENST00000572277 291 ntBASIC4.08□□□□□ -1.76
SRRM4A7MD48 AC011840.5-201ENST00000582125 771 ntBASIC4.08□□□□□ -1.76
SRRM4A7MD48 AC012254.4-201ENST00000588843 273 ntBASIC4.08□□□□□ -1.76
SRRM4A7MD48 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC4.08□□□□□ -1.76
SRRM4A7MD48 AC133794.1-201ENST00000602731 914 ntBASIC4.08□□□□□ -1.76
SRRM4A7MD48 AC095055.1-201ENST00000603472 1113 ntBASIC4.08□□□□□ -1.76
SRRM4A7MD48 AC144521.1-201ENST00000607148 956 ntBASIC4.08□□□□□ -1.76
SRRM4A7MD48 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC4.08□□□□□ -1.76
SRRM4A7MD48 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC4.08□□□□□ -1.76
SRRM4A7MD48 AP000240.1-201ENST00000609910 452 ntBASIC4.08□□□□□ -1.76
SRRM4A7MD48 BNIP3P41-202ENST00000616656 861 ntBASIC4.08□□□□□ -1.76
SRRM4A7MD48 AL731566.1-201ENST00000620490 1937 ntBASIC4.08□□□□□ -1.76
SRRM4A7MD48 AC011447.7-201ENST00000624228 1590 ntBASIC4.08□□□□□ -1.76
SRRM4A7MD48 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC4.08□□□□□ -1.76
SRRM4A7MD48 U6.107-201ENST00000637108 79 ntBASIC4.08□□□□□ -1.76
SRRM4A7MD48 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC4.08□□□□□ -1.76
SRRM4A7MD48 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
SRRM4A7MD48 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 91.8 ms