Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 AC027104.1-201ENST00000563702 681 ntBASIC5.23□□□□□ -1.57
TBC1D3FA6NER0 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
TBC1D3FA6NER0 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC5.23□□□□□ -1.57
TBC1D3FA6NER0 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC5.23□□□□□ -1.57
TBC1D3FA6NER0 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC5.23□□□□□ -1.57
TBC1D3FA6NER0 AL357094.1-201ENST00000603845 844 ntBASIC5.23□□□□□ -1.57
TBC1D3FA6NER0 AC013468.1-201ENST00000608680 598 ntBASIC5.23□□□□□ -1.57
TBC1D3FA6NER0 AC093799.2-201ENST00000610062 578 ntBASIC5.23□□□□□ -1.57
TBC1D3FA6NER0 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.23□□□□□ -1.57
TBC1D3FA6NER0 AC009159.2-201ENST00000617603 606 ntBASIC5.23□□□□□ -1.57
TBC1D3FA6NER0 AC006386.1-201ENST00000619436 415 ntBASIC5.23□□□□□ -1.57
TBC1D3FA6NER0 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
TBC1D3FA6NER0 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
TBC1D3FA6NER0 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.23□□□□□ -1.57
TBC1D3FA6NER0 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
TBC1D3FA6NER0 TANK-205ENST00000405852 2155 ntTSL 5 BASIC5.23□□□□□ -1.57
TBC1D3FA6NER0 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
TBC1D3FA6NER0 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
TBC1D3FA6NER0 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
TBC1D3FA6NER0 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
TBC1D3FA6NER0 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.23□□□□□ -1.57
TBC1D3FA6NER0 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
TBC1D3FA6NER0 AC100757.1-201ENST00000616872 1835 ntBASIC5.23□□□□□ -1.57
TBC1D3FA6NER0 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
TBC1D3FA6NER0 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
TBC1D3FA6NER0 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
TBC1D3FA6NER0 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.22□□□□□ -1.57
TBC1D3FA6NER0 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
TBC1D3FA6NER0 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
TBC1D3FA6NER0 SNURFL-201ENST00000309296 343 ntBASIC5.22□□□□□ -1.57
TBC1D3FA6NER0 UBE2Q2P1-202ENST00000354771 883 ntBASIC5.22□□□□□ -1.57
TBC1D3FA6NER0 U3.3-201ENST00000362986 216 ntBASIC5.22□□□□□ -1.57
TBC1D3FA6NER0 RNA5SP90-201ENST00000364801 99 ntBASIC5.22□□□□□ -1.57
TBC1D3FA6NER0 AL109941.1-201ENST00000401925 229 ntBASIC5.22□□□□□ -1.57
TBC1D3FA6NER0 LINC01881-201ENST00000416103 412 ntBASIC5.22□□□□□ -1.57
TBC1D3FA6NER0 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC5.22□□□□□ -1.57
TBC1D3FA6NER0 RBMY2KP-201ENST00000418221 992 ntBASIC5.22□□□□□ -1.57
TBC1D3FA6NER0 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
TBC1D3FA6NER0 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC5.22□□□□□ -1.57
TBC1D3FA6NER0 DNAJA1P1-201ENST00000425106 1187 ntBASIC5.22□□□□□ -1.57
TBC1D3FA6NER0 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC5.22□□□□□ -1.57
TBC1D3FA6NER0 USP9YP24-201ENST00000434374 697 ntBASIC5.22□□□□□ -1.57
TBC1D3FA6NER0 FTH1P16-201ENST00000435241 552 ntBASIC5.22□□□□□ -1.57
TBC1D3FA6NER0 NDUFB4P8-201ENST00000435351 367 ntBASIC5.22□□□□□ -1.57
TBC1D3FA6NER0 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC5.22□□□□□ -1.57
TBC1D3FA6NER0 AC006466.1-201ENST00000438721 289 ntBASIC5.22□□□□□ -1.57
TBC1D3FA6NER0 PTGES3P1-201ENST00000439531 483 ntBASIC5.22□□□□□ -1.57
TBC1D3FA6NER0 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC5.22□□□□□ -1.57
TBC1D3FA6NER0 USP9YP17-201ENST00000444617 696 ntBASIC5.22□□□□□ -1.57
TBC1D3FA6NER0 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC5.22□□□□□ -1.57
TBC1D3FA6NER0 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC5.22□□□□□ -1.57
TBC1D3FA6NER0 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC5.22□□□□□ -1.57
TBC1D3FA6NER0 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
TBC1D3FA6NER0 AC091685.2-201ENST00000454924 864 ntBASIC5.22□□□□□ -1.57
TBC1D3FA6NER0 AC096741.1-201ENST00000472250 846 ntBASIC5.22□□□□□ -1.57
TBC1D3FA6NER0 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC5.22□□□□□ -1.57
TBC1D3FA6NER0 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
TBC1D3FA6NER0 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.22□□□□□ -1.57
TBC1D3FA6NER0 AC002456.2-201ENST00000509356 380 ntBASIC5.22□□□□□ -1.57
TBC1D3FA6NER0 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC5.22□□□□□ -1.57
TBC1D3FA6NER0 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC5.22□□□□□ -1.57
TBC1D3FA6NER0 RN7SKP260-201ENST00000516907 149 ntBASIC5.22□□□□□ -1.57
TBC1D3FA6NER0 LRRC34P1-201ENST00000542742 915 ntBASIC5.22□□□□□ -1.57
TBC1D3FA6NER0 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC5.22□□□□□ -1.57
TBC1D3FA6NER0 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
TBC1D3FA6NER0 ATP5F1P7-201ENST00000567330 760 ntBASIC5.22□□□□□ -1.57
TBC1D3FA6NER0 AC019322.1-201ENST00000571869 389 ntBASIC5.22□□□□□ -1.57
TBC1D3FA6NER0 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC5.22□□□□□ -1.57
TBC1D3FA6NER0 AC011840.5-201ENST00000582125 771 ntBASIC5.22□□□□□ -1.57
TBC1D3FA6NER0 AC234772.3-201ENST00000602277 528 ntBASIC5.22□□□□□ -1.57
TBC1D3FA6NER0 AC093424.1-201ENST00000604999 338 ntBASIC5.22□□□□□ -1.57
TBC1D3FA6NER0 AC100827.5-201ENST00000615883 426 ntBASIC5.22□□□□□ -1.57
TBC1D3FA6NER0 AC138907.10-201ENST00000623708 983 ntBASIC5.22□□□□□ -1.57
TBC1D3FA6NER0 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
TBC1D3FA6NER0 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
TBC1D3FA6NER0 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.22□□□□□ -1.57
TBC1D3FA6NER0 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
TBC1D3FA6NER0 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC5.22□□□□□ -1.57
TBC1D3FA6NER0 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.22□□□□□ -1.57
TBC1D3FA6NER0 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
TBC1D3FA6NER0 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.22□□□□□ -1.57
TBC1D3FA6NER0 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
TBC1D3FA6NER0 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
TBC1D3FA6NER0 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
TBC1D3FA6NER0 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.21□□□□□ -1.57
TBC1D3FA6NER0 AC109446.4-201ENST00000623235 2755 ntBASIC5.21□□□□□ -1.57
TBC1D3FA6NER0 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.21□□□□□ -1.57
TBC1D3FA6NER0 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.21□□□□□ -1.57
TBC1D3FA6NER0 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
TBC1D3FA6NER0 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.21□□□□□ -1.58
TBC1D3FA6NER0 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC5.21□□□□□ -1.58
TBC1D3FA6NER0 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
TBC1D3FA6NER0 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.21□□□□□ -1.58
TBC1D3FA6NER0 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
TBC1D3FA6NER0 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
TBC1D3FA6NER0 ENSAP3-201ENST00000312710 333 ntBASIC5.21□□□□□ -1.58
TBC1D3FA6NER0 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.21□□□□□ -1.58
TBC1D3FA6NER0 RNA5SP123-201ENST00000363244 119 ntBASIC5.21□□□□□ -1.58
TBC1D3FA6NER0 RNA5SP455-201ENST00000365190 119 ntBASIC5.21□□□□□ -1.58
TBC1D3FA6NER0 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms