Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
VPS29Q9UBQ0 MIR550A3-201ENST00000390735 95 ntBASIC4.29□□□□□ -1.72
VPS29Q9UBQ0 AL049697.2-201ENST00000403708 294 ntBASIC4.29□□□□□ -1.72
VPS29Q9UBQ0 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
VPS29Q9UBQ0 RN7SKP167-201ENST00000411047 285 ntBASIC4.29□□□□□ -1.72
VPS29Q9UBQ0 UBTFL3-201ENST00000418934 1024 ntBASIC4.29□□□□□ -1.72
VPS29Q9UBQ0 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.29□□□□□ -1.72
VPS29Q9UBQ0 AL590762.4-201ENST00000425885 253 ntBASIC4.29□□□□□ -1.72
VPS29Q9UBQ0 AL049745.1-201ENST00000433953 286 ntBASIC4.29□□□□□ -1.72
VPS29Q9UBQ0 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC4.29□□□□□ -1.72
VPS29Q9UBQ0 RPL36AP15-201ENST00000444514 266 ntBASIC4.29□□□□□ -1.72
VPS29Q9UBQ0 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.29□□□□□ -1.72
VPS29Q9UBQ0 RPL23AP43-201ENST00000446445 471 ntBASIC4.29□□□□□ -1.72
VPS29Q9UBQ0 THAP12P8-201ENST00000447914 2115 ntBASIC4.29□□□□□ -1.72
VPS29Q9UBQ0 AL162591.2-201ENST00000449634 317 ntBASIC4.29□□□□□ -1.72
VPS29Q9UBQ0 AC010326.1-201ENST00000462726 602 ntBASIC4.29□□□□□ -1.72
VPS29Q9UBQ0 UBTFL6-201ENST00000477929 1024 ntBASIC4.29□□□□□ -1.72
VPS29Q9UBQ0 AC083982.1-201ENST00000485679 344 ntBASIC4.29□□□□□ -1.72
VPS29Q9UBQ0 RPL32P9-201ENST00000487963 407 ntBASIC4.29□□□□□ -1.72
VPS29Q9UBQ0 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
VPS29Q9UBQ0 AC100770.1-201ENST00000532310 322 ntBASIC4.29□□□□□ -1.72
VPS29Q9UBQ0 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.29□□□□□ -1.72
VPS29Q9UBQ0 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC4.29□□□□□ -1.72
VPS29Q9UBQ0 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC4.29□□□□□ -1.72
VPS29Q9UBQ0 AC122134.1-201ENST00000565664 1104 ntBASIC4.29□□□□□ -1.72
VPS29Q9UBQ0 NPM1P45-201ENST00000583151 559 ntBASIC4.29□□□□□ -1.72
VPS29Q9UBQ0 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.29□□□□□ -1.72
VPS29Q9UBQ0 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.29□□□□□ -1.72
VPS29Q9UBQ0 FAM25E-202ENST00000608562 189 ntBASIC4.29□□□□□ -1.72
VPS29Q9UBQ0 OR7M1P-201ENST00000608946 533 ntBASIC4.29□□□□□ -1.72
VPS29Q9UBQ0 AL159169.2-201ENST00000610061 1269 ntBASIC4.29□□□□□ -1.72
VPS29Q9UBQ0 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC4.29□□□□□ -1.72
VPS29Q9UBQ0 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC4.29□□□□□ -1.72
VPS29Q9UBQ0 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC4.29□□□□□ -1.72
VPS29Q9UBQ0 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.29□□□□□ -1.72
VPS29Q9UBQ0 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
VPS29Q9UBQ0 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
VPS29Q9UBQ0 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
VPS29Q9UBQ0 ARHGAP42P1-201ENST00000507474 1976 ntBASIC4.29□□□□□ -1.72
VPS29Q9UBQ0 VN2R3P-201ENST00000422626 1412 ntBASIC4.29□□□□□ -1.72
VPS29Q9UBQ0 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
VPS29Q9UBQ0 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.29□□□□□ -1.72
VPS29Q9UBQ0 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
VPS29Q9UBQ0 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
VPS29Q9UBQ0 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
VPS29Q9UBQ0 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.28□□□□□ -1.72
VPS29Q9UBQ0 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
VPS29Q9UBQ0 MAPK10-349ENST00000641767 3661 ntBASIC4.28□□□□□ -1.72
VPS29Q9UBQ0 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
VPS29Q9UBQ0 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
VPS29Q9UBQ0 AL358176.3-201ENST00000420757 454 ntBASIC4.28□□□□□ -1.72
VPS29Q9UBQ0 AP001324.1-201ENST00000428553 399 ntBASIC4.28□□□□□ -1.72
VPS29Q9UBQ0 AL359265.2-201ENST00000434367 631 ntBASIC4.28□□□□□ -1.72
VPS29Q9UBQ0 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.28□□□□□ -1.72
VPS29Q9UBQ0 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.28□□□□□ -1.72
VPS29Q9UBQ0 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.28□□□□□ -1.72
VPS29Q9UBQ0 RPL12P20-201ENST00000475538 479 ntBASIC4.28□□□□□ -1.72
VPS29Q9UBQ0 AC093270.2-201ENST00000486157 792 ntBASIC4.28□□□□□ -1.72
VPS29Q9UBQ0 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.28□□□□□ -1.72
VPS29Q9UBQ0 STMN1P2-201ENST00000508435 439 ntBASIC4.28□□□□□ -1.72
VPS29Q9UBQ0 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.28□□□□□ -1.72
VPS29Q9UBQ0 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.28□□□□□ -1.72
VPS29Q9UBQ0 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
VPS29Q9UBQ0 OR5D15P-201ENST00000531671 942 ntBASIC4.28□□□□□ -1.72
VPS29Q9UBQ0 AC022882.1-201ENST00000532142 501 ntBASIC4.28□□□□□ -1.72
VPS29Q9UBQ0 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
VPS29Q9UBQ0 RN7SL690P-201ENST00000582087 240 ntBASIC4.28□□□□□ -1.72
VPS29Q9UBQ0 RN7SL52P-201ENST00000584271 284 ntBASIC4.28□□□□□ -1.72
VPS29Q9UBQ0 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.28□□□□□ -1.72
VPS29Q9UBQ0 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC4.28□□□□□ -1.72
VPS29Q9UBQ0 AC067838.1-201ENST00000606064 577 ntBASIC4.28□□□□□ -1.72
VPS29Q9UBQ0 AL138721.1-201ENST00000616756 179 ntBASIC4.28□□□□□ -1.72
VPS29Q9UBQ0 AC007546.2-201ENST00000623996 360 ntBASIC4.28□□□□□ -1.72
VPS29Q9UBQ0 AP003499.2-201ENST00000624100 483 ntBASIC4.28□□□□□ -1.72
VPS29Q9UBQ0 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC4.28□□□□□ -1.72
VPS29Q9UBQ0 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.28□□□□□ -1.72
VPS29Q9UBQ0 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.28□□□□□ -1.72
VPS29Q9UBQ0 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC4.28□□□□□ -1.72
VPS29Q9UBQ0 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
VPS29Q9UBQ0 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
VPS29Q9UBQ0 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
VPS29Q9UBQ0 MTCO1P22-201ENST00000604619 1360 ntBASIC4.27□□□□□ -1.73
VPS29Q9UBQ0 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
VPS29Q9UBQ0 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
VPS29Q9UBQ0 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
VPS29Q9UBQ0 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.27□□□□□ -1.73
VPS29Q9UBQ0 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
VPS29Q9UBQ0 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.27□□□□□ -1.73
VPS29Q9UBQ0 SNORA74C-2-201ENST00000411179 201 ntBASIC4.27□□□□□ -1.73
VPS29Q9UBQ0 ARAFP1-201ENST00000422172 605 ntBASIC4.27□□□□□ -1.73
VPS29Q9UBQ0 AC106901.1-201ENST00000425086 698 ntBASIC4.27□□□□□ -1.73
VPS29Q9UBQ0 AC006455.6-201ENST00000426192 893 ntBASIC4.27□□□□□ -1.73
VPS29Q9UBQ0 NPM1P26-201ENST00000426339 738 ntBASIC4.27□□□□□ -1.73
VPS29Q9UBQ0 AL360081.1-201ENST00000428299 555 ntBASIC4.27□□□□□ -1.73
VPS29Q9UBQ0 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.27□□□□□ -1.73
VPS29Q9UBQ0 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC4.27□□□□□ -1.73
VPS29Q9UBQ0 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
VPS29Q9UBQ0 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC4.27□□□□□ -1.73
VPS29Q9UBQ0 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC4.27□□□□□ -1.73
VPS29Q9UBQ0 RPS27AP17-201ENST00000463344 455 ntBASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms