Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.17□□□□□ -1.58
LRFN1Q9P244 CFL1P1-202ENST00000432948 411 ntBASIC5.17□□□□□ -1.58
LRFN1Q9P244 NANOGP2-201ENST00000435391 727 ntBASIC5.17□□□□□ -1.58
LRFN1Q9P244 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC5.17□□□□□ -1.58
LRFN1Q9P244 AC006335.2-201ENST00000437993 330 ntBASIC5.17□□□□□ -1.58
LRFN1Q9P244 AC073052.1-201ENST00000440417 714 ntBASIC5.17□□□□□ -1.58
LRFN1Q9P244 EEF1A1P39-201ENST00000440791 250 ntBASIC5.17□□□□□ -1.58
LRFN1Q9P244 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC5.17□□□□□ -1.58
LRFN1Q9P244 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.17□□□□□ -1.58
LRFN1Q9P244 EIF4A1P11-201ENST00000451239 222 ntBASIC5.17□□□□□ -1.58
LRFN1Q9P244 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC5.17□□□□□ -1.58
LRFN1Q9P244 OR2AO1P-201ENST00000476497 403 ntBASIC5.17□□□□□ -1.58
LRFN1Q9P244 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
LRFN1Q9P244 RPS3AP6-201ENST00000484430 795 ntBASIC5.17□□□□□ -1.58
LRFN1Q9P244 RN7SL547P-201ENST00000490793 290 ntBASIC5.17□□□□□ -1.58
LRFN1Q9P244 UBA52P3-201ENST00000491303 382 ntBASIC5.17□□□□□ -1.58
LRFN1Q9P244 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC5.17□□□□□ -1.58
LRFN1Q9P244 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC5.17□□□□□ -1.58
LRFN1Q9P244 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC5.17□□□□□ -1.58
LRFN1Q9P244 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC5.17□□□□□ -1.58
LRFN1Q9P244 OR5M14P-201ENST00000506803 618 ntBASIC5.17□□□□□ -1.58
LRFN1Q9P244 RN7SKP99-201ENST00000517028 307 ntBASIC5.17□□□□□ -1.58
LRFN1Q9P244 HIGD1AP6-201ENST00000521833 279 ntBASIC5.17□□□□□ -1.58
LRFN1Q9P244 SMARCE1P4-201ENST00000523647 241 ntBASIC5.17□□□□□ -1.58
LRFN1Q9P244 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC5.17□□□□□ -1.58
LRFN1Q9P244 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC5.17□□□□□ -1.58
LRFN1Q9P244 RGS4-207ENST00000527809 817 ntTSL 4 BASIC5.17□□□□□ -1.58
LRFN1Q9P244 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.17□□□□□ -1.58
LRFN1Q9P244 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC5.17□□□□□ -1.58
LRFN1Q9P244 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC5.17□□□□□ -1.58
LRFN1Q9P244 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
LRFN1Q9P244 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC5.17□□□□□ -1.58
LRFN1Q9P244 AC044860.2-201ENST00000561005 179 ntBASIC5.17□□□□□ -1.58
LRFN1Q9P244 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
LRFN1Q9P244 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC5.17□□□□□ -1.58
LRFN1Q9P244 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.17□□□□□ -1.58
LRFN1Q9P244 MIR5708-201ENST00000579723 85 ntBASIC5.17□□□□□ -1.58
LRFN1Q9P244 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.17□□□□□ -1.58
LRFN1Q9P244 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC5.17□□□□□ -1.58
LRFN1Q9P244 VN1R83P-201ENST00000595685 445 ntBASIC5.17□□□□□ -1.58
LRFN1Q9P244 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC5.17□□□□□ -1.58
LRFN1Q9P244 AC068790.7-201ENST00000602347 528 ntBASIC5.17□□□□□ -1.58
LRFN1Q9P244 AL020997.3-201ENST00000602843 359 ntBASIC5.17□□□□□ -1.58
LRFN1Q9P244 AC091488.1-201ENST00000604239 660 ntBASIC5.17□□□□□ -1.58
LRFN1Q9P244 NANOGP3-201ENST00000605855 286 ntBASIC5.17□□□□□ -1.58
LRFN1Q9P244 AL133481.2-203ENST00000607558 139 ntBASIC5.17□□□□□ -1.58
LRFN1Q9P244 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC5.17□□□□□ -1.58
LRFN1Q9P244 AC009163.6-201ENST00000612367 342 ntBASIC5.17□□□□□ -1.58
LRFN1Q9P244 AC005840.5-201ENST00000619166 599 ntBASIC5.17□□□□□ -1.58
LRFN1Q9P244 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
LRFN1Q9P244 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
LRFN1Q9P244 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
LRFN1Q9P244 AC018445.2-201ENST00000622987 260 ntBASIC5.17□□□□□ -1.58
LRFN1Q9P244 AL157770.1-201ENST00000623049 439 ntBASIC5.17□□□□□ -1.58
LRFN1Q9P244 AC132068.1-201ENST00000623805 459 ntBASIC5.17□□□□□ -1.58
LRFN1Q9P244 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC5.17□□□□□ -1.58
LRFN1Q9P244 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC5.17□□□□□ -1.58
LRFN1Q9P244 AC090897.3-201ENST00000636973 1157 ntBASIC5.17□□□□□ -1.58
LRFN1Q9P244 LINC02211-204ENST00000642024 1070 ntBASIC5.17□□□□□ -1.58
LRFN1Q9P244 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
LRFN1Q9P244 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
LRFN1Q9P244 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
LRFN1Q9P244 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.17□□□□□ -1.58
LRFN1Q9P244 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
LRFN1Q9P244 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
LRFN1Q9P244 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC5.17□□□□□ -1.58
LRFN1Q9P244 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.17□□□□□ -1.58
LRFN1Q9P244 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.17□□□□□ -1.58
LRFN1Q9P244 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
LRFN1Q9P244 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
LRFN1Q9P244 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
LRFN1Q9P244 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.16□□□□□ -1.58
LRFN1Q9P244 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.16□□□□□ -1.58
LRFN1Q9P244 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
LRFN1Q9P244 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
LRFN1Q9P244 CASC19-206ENST00000641028 1430 ntBASIC5.16□□□□□ -1.58
LRFN1Q9P244 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
LRFN1Q9P244 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.16□□□□□ -1.58
LRFN1Q9P244 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.16□□□□□ -1.58
LRFN1Q9P244 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
LRFN1Q9P244 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
LRFN1Q9P244 SNORA40.2-201ENST00000390847 128 ntBASIC5.16□□□□□ -1.58
LRFN1Q9P244 RNU6-272P-201ENST00000411028 104 ntBASIC5.16□□□□□ -1.58
LRFN1Q9P244 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
LRFN1Q9P244 OR4K6P-201ENST00000416478 897 ntBASIC5.16□□□□□ -1.58
LRFN1Q9P244 AL356320.2-201ENST00000417263 507 ntBASIC5.16□□□□□ -1.58
LRFN1Q9P244 RNGTTP1-201ENST00000420965 728 ntBASIC5.16□□□□□ -1.58
LRFN1Q9P244 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
LRFN1Q9P244 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC5.16□□□□□ -1.58
LRFN1Q9P244 AL031736.2-201ENST00000426573 787 ntBASIC5.16□□□□□ -1.58
LRFN1Q9P244 VTI1BP4-201ENST00000427516 527 ntBASIC5.16□□□□□ -1.58
LRFN1Q9P244 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.16□□□□□ -1.58
LRFN1Q9P244 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC5.16□□□□□ -1.58
LRFN1Q9P244 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC5.16□□□□□ -1.58
LRFN1Q9P244 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC5.16□□□□□ -1.58
LRFN1Q9P244 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC5.16□□□□□ -1.58
LRFN1Q9P244 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
LRFN1Q9P244 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC5.16□□□□□ -1.58
LRFN1Q9P244 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.16□□□□□ -1.58
LRFN1Q9P244 OTX2P1-201ENST00000450956 354 ntBASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms