Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CCDC28BQ9BUN5 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.6□□□□□ -1.67
CCDC28BQ9BUN5 IQCB2P-201ENST00000401788 1633 ntBASIC4.6□□□□□ -1.67
CCDC28BQ9BUN5 AC087565.3-202ENST00000642085 1603 ntBASIC4.6□□□□□ -1.67
CCDC28BQ9BUN5 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.6□□□□□ -1.67
CCDC28BQ9BUN5 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CCDC28BQ9BUN5 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CCDC28BQ9BUN5 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CCDC28BQ9BUN5 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.6□□□□□ -1.67
CCDC28BQ9BUN5 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CCDC28BQ9BUN5 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
CCDC28BQ9BUN5 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CCDC28BQ9BUN5 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CCDC28BQ9BUN5 SNURFL-201ENST00000309296 343 ntBASIC4.59□□□□□ -1.67
CCDC28BQ9BUN5 RNA5SP502-201ENST00000362694 119 ntBASIC4.59□□□□□ -1.67
CCDC28BQ9BUN5 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
CCDC28BQ9BUN5 AL031985.1-201ENST00000392713 418 ntBASIC4.59□□□□□ -1.67
CCDC28BQ9BUN5 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.59□□□□□ -1.67
CCDC28BQ9BUN5 AL590762.2-201ENST00000395798 571 ntBASIC4.59□□□□□ -1.67
CCDC28BQ9BUN5 CXADRP1-201ENST00000398098 1095 ntBASIC4.59□□□□□ -1.67
CCDC28BQ9BUN5 AL031119.1-201ENST00000404707 1879 ntBASIC4.59□□□□□ -1.67
CCDC28BQ9BUN5 ZSCAN12P1-201ENST00000406489 419 ntBASIC4.59□□□□□ -1.67
CCDC28BQ9BUN5 RNU2-72P-201ENST00000411175 163 ntBASIC4.59□□□□□ -1.67
CCDC28BQ9BUN5 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC4.59□□□□□ -1.67
CCDC28BQ9BUN5 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC4.59□□□□□ -1.67
CCDC28BQ9BUN5 VN1R31P-201ENST00000417498 730 ntBASIC4.59□□□□□ -1.67
CCDC28BQ9BUN5 AC092570.3-201ENST00000420113 693 ntBASIC4.59□□□□□ -1.67
CCDC28BQ9BUN5 GLUD1P9-201ENST00000420997 1173 ntBASIC4.59□□□□□ -1.67
CCDC28BQ9BUN5 AL356806.1-201ENST00000422524 916 ntBASIC4.59□□□□□ -1.67
CCDC28BQ9BUN5 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.59□□□□□ -1.67
CCDC28BQ9BUN5 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.59□□□□□ -1.67
CCDC28BQ9BUN5 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC4.59□□□□□ -1.67
CCDC28BQ9BUN5 YWHAEP5-201ENST00000431545 765 ntBASIC4.59□□□□□ -1.67
CCDC28BQ9BUN5 MTND4P15-201ENST00000437913 1033 ntBASIC4.59□□□□□ -1.67
CCDC28BQ9BUN5 AL606490.8-201ENST00000441624 319 ntBASIC4.59□□□□□ -1.67
CCDC28BQ9BUN5 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC4.59□□□□□ -1.67
CCDC28BQ9BUN5 AL137845.2-201ENST00000444292 988 ntBASIC4.59□□□□□ -1.67
CCDC28BQ9BUN5 AL355852.1-201ENST00000454081 1771 ntBASIC4.59□□□□□ -1.67
CCDC28BQ9BUN5 AL389915.2-201ENST00000454576 441 ntBASIC4.59□□□□□ -1.67
CCDC28BQ9BUN5 RN7SL809P-201ENST00000482040 297 ntBASIC4.59□□□□□ -1.67
CCDC28BQ9BUN5 PPIAP19-201ENST00000486414 492 ntBASIC4.59□□□□□ -1.67
CCDC28BQ9BUN5 RPL37AP8-201ENST00000494116 276 ntBASIC4.59□□□□□ -1.67
CCDC28BQ9BUN5 AC108693.1-201ENST00000496068 432 ntBASIC4.59□□□□□ -1.67
CCDC28BQ9BUN5 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC4.59□□□□□ -1.67
CCDC28BQ9BUN5 AK6-203ENST00000502819 743 ntTSL 5 BASIC4.59□□□□□ -1.67
CCDC28BQ9BUN5 AK4P6-201ENST00000505168 528 ntBASIC4.59□□□□□ -1.67
CCDC28BQ9BUN5 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.59□□□□□ -1.67
CCDC28BQ9BUN5 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC4.59□□□□□ -1.67
CCDC28BQ9BUN5 BX510359.5-201ENST00000515651 304 ntBASIC4.59□□□□□ -1.67
CCDC28BQ9BUN5 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC4.59□□□□□ -1.67
CCDC28BQ9BUN5 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.59□□□□□ -1.67
CCDC28BQ9BUN5 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC4.59□□□□□ -1.67
CCDC28BQ9BUN5 CNOT6LP1-201ENST00000559681 1462 ntBASIC4.59□□□□□ -1.67
CCDC28BQ9BUN5 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC4.59□□□□□ -1.67
CCDC28BQ9BUN5 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC4.59□□□□□ -1.67
CCDC28BQ9BUN5 FKBP1AP1-201ENST00000594588 318 ntBASIC4.59□□□□□ -1.67
CCDC28BQ9BUN5 AC025946.2-201ENST00000603398 234 ntBASIC4.59□□□□□ -1.67
CCDC28BQ9BUN5 AC007423.1-201ENST00000605009 627 ntBASIC4.59□□□□□ -1.67
CCDC28BQ9BUN5 AL136370.1-201ENST00000608166 691 ntBASIC4.59□□□□□ -1.67
CCDC28BQ9BUN5 CXADRP3-202ENST00000617265 1100 ntBASIC4.59□□□□□ -1.67
CCDC28BQ9BUN5 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.59□□□□□ -1.67
CCDC28BQ9BUN5 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.59□□□□□ -1.67
CCDC28BQ9BUN5 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
CCDC28BQ9BUN5 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.59□□□□□ -1.68
CCDC28BQ9BUN5 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.59□□□□□ -1.68
CCDC28BQ9BUN5 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.59□□□□□ -1.68
CCDC28BQ9BUN5 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
CCDC28BQ9BUN5 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CCDC28BQ9BUN5 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.58□□□□□ -1.68
CCDC28BQ9BUN5 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CCDC28BQ9BUN5 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CCDC28BQ9BUN5 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CCDC28BQ9BUN5 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
CCDC28BQ9BUN5 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CCDC28BQ9BUN5 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CCDC28BQ9BUN5 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
CCDC28BQ9BUN5 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CCDC28BQ9BUN5 AL136164.3-201ENST00000624429 3978 ntBASIC4.58□□□□□ -1.68
CCDC28BQ9BUN5 RNA5SP428-201ENST00000365129 132 ntBASIC4.58□□□□□ -1.68
CCDC28BQ9BUN5 OR6K3-202ENST00000368146 996 ntBASIC4.58□□□□□ -1.68
CCDC28BQ9BUN5 FIG4-202ENST00000368941 791 ntTSL 3 BASIC4.58□□□□□ -1.68
CCDC28BQ9BUN5 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CCDC28BQ9BUN5 AC019155.1-201ENST00000382242 574 ntBASIC4.58□□□□□ -1.68
CCDC28BQ9BUN5 EIF4A1P3-201ENST00000411521 244 ntBASIC4.58□□□□□ -1.68
CCDC28BQ9BUN5 GTF2IP5-201ENST00000414608 731 ntBASIC4.58□□□□□ -1.68
CCDC28BQ9BUN5 AL645608.4-201ENST00000423619 154 ntBASIC4.58□□□□□ -1.68
CCDC28BQ9BUN5 RPL21P43-201ENST00000425440 472 ntBASIC4.58□□□□□ -1.68
CCDC28BQ9BUN5 FAR1P1-201ENST00000427163 934 ntBASIC4.58□□□□□ -1.68
CCDC28BQ9BUN5 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC4.58□□□□□ -1.68
CCDC28BQ9BUN5 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC4.58□□□□□ -1.68
CCDC28BQ9BUN5 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.58□□□□□ -1.68
CCDC28BQ9BUN5 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC4.58□□□□□ -1.68
CCDC28BQ9BUN5 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CCDC28BQ9BUN5 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC4.58□□□□□ -1.68
CCDC28BQ9BUN5 RPL23AP56-201ENST00000460778 453 ntBASIC4.58□□□□□ -1.68
CCDC28BQ9BUN5 RN7SL319P-201ENST00000480656 221 ntBASIC4.58□□□□□ -1.68
CCDC28BQ9BUN5 SYT14P1-201ENST00000481459 721 ntBASIC4.58□□□□□ -1.68
CCDC28BQ9BUN5 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC4.58□□□□□ -1.68
CCDC28BQ9BUN5 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC4.58□□□□□ -1.68
CCDC28BQ9BUN5 NOX4-213ENST00000531342 696 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms