Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC3.73□□□□□ -1.81
LITAFQ99732 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC3.73□□□□□ -1.81
LITAFQ99732 AL031429.2-201ENST00000602605 649 ntBASIC3.73□□□□□ -1.81
LITAFQ99732 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC3.73□□□□□ -1.81
LITAFQ99732 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC3.73□□□□□ -1.81
LITAFQ99732 WBP1LP12-201ENST00000604449 331 ntBASIC3.73□□□□□ -1.81
LITAFQ99732 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC3.73□□□□□ -1.81
LITAFQ99732 AC092653.1-201ENST00000608509 531 ntBASIC3.73□□□□□ -1.81
LITAFQ99732 SSX9-202ENST00000608568 580 ntTSL 4 BASIC3.73□□□□□ -1.81
LITAFQ99732 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC3.73□□□□□ -1.81
LITAFQ99732 AL021918.2-201ENST00000613415 194 ntBASIC3.73□□□□□ -1.81
LITAFQ99732 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC3.73□□□□□ -1.81
LITAFQ99732 AL607023.1-201ENST00000620045 248 ntBASIC3.73□□□□□ -1.81
LITAFQ99732 AC068792.1-201ENST00000621354 417 ntBASIC3.73□□□□□ -1.81
LITAFQ99732 AC245033.2-201ENST00000621893 421 ntTSL 3 BASIC3.73□□□□□ -1.81
LITAFQ99732 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC3.73□□□□□ -1.81
LITAFQ99732 TMEM55A-206ENST00000630164 171 ntTSL 5 BASIC3.73□□□□□ -1.81
LITAFQ99732 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC3.73□□□□□ -1.81
LITAFQ99732 AC087565.2-201ENST00000637695 952 ntTSL 5 BASIC3.73□□□□□ -1.81
LITAFQ99732 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC3.73□□□□□ -1.81
LITAFQ99732 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC3.73□□□□□ -1.81
LITAFQ99732 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
LITAFQ99732 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC3.73□□□□□ -1.81
LITAFQ99732 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
LITAFQ99732 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
LITAFQ99732 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
LITAFQ99732 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
LITAFQ99732 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC3.73□□□□□ -1.81
LITAFQ99732 AC025263.3-201ENST00000622965 1396 ntBASIC3.73□□□□□ -1.81
LITAFQ99732 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC3.73□□□□□ -1.81
LITAFQ99732 ERVFRD-3-201ENST00000578561 1617 ntBASIC3.73□□□□□ -1.81
LITAFQ99732 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
LITAFQ99732 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC3.73□□□□□ -1.81
LITAFQ99732 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
LITAFQ99732 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
LITAFQ99732 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
LITAFQ99732 STX3-208ENST00000641815 3236 ntBASIC3.72□□□□□ -1.81
LITAFQ99732 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC3.72□□□□□ -1.81
LITAFQ99732 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
LITAFQ99732 AC109315.1-201ENST00000584143 1347 ntBASIC3.72□□□□□ -1.81
LITAFQ99732 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
LITAFQ99732 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
LITAFQ99732 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
LITAFQ99732 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC3.72□□□□□ -1.81
LITAFQ99732 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
LITAFQ99732 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
LITAFQ99732 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC3.72□□□□□ -1.81
LITAFQ99732 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC3.72□□□□□ -1.81
LITAFQ99732 GDA-209ENST00000545168 5362 ntTSL 2 BASIC3.72□□□□□ -1.81
LITAFQ99732 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
LITAFQ99732 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
LITAFQ99732 RNF6P1-201ENST00000444889 1784 ntBASIC3.72□□□□□ -1.81
LITAFQ99732 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
LITAFQ99732 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
LITAFQ99732 SNORA55-201ENST00000364587 135 ntBASIC3.72□□□□□ -1.81
LITAFQ99732 SNORD56.6-201ENST00000384569 71 ntBASIC3.72□□□□□ -1.81
LITAFQ99732 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
LITAFQ99732 AL359643.1-201ENST00000404109 423 ntBASIC3.72□□□□□ -1.81
LITAFQ99732 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
LITAFQ99732 AL161449.1-201ENST00000414531 1199 ntBASIC3.72□□□□□ -1.81
LITAFQ99732 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC3.72□□□□□ -1.81
LITAFQ99732 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC3.72□□□□□ -1.81
LITAFQ99732 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC3.72□□□□□ -1.81
LITAFQ99732 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC3.72□□□□□ -1.81
LITAFQ99732 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC3.72□□□□□ -1.81
LITAFQ99732 DNAJA1P2-201ENST00000421360 1197 ntBASIC3.72□□□□□ -1.81
LITAFQ99732 AC104333.2-201ENST00000422630 192 ntBASIC3.72□□□□□ -1.81
LITAFQ99732 ELOBP4-201ENST00000423418 296 ntBASIC3.72□□□□□ -1.81
LITAFQ99732 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC3.72□□□□□ -1.81
LITAFQ99732 AL022400.1-201ENST00000423946 935 ntBASIC3.72□□□□□ -1.81
LITAFQ99732 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
LITAFQ99732 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
LITAFQ99732 BLOC1S2P1-201ENST00000428431 301 ntBASIC3.72□□□□□ -1.81
LITAFQ99732 AC104463.2-201ENST00000428573 314 ntTSL 5 BASIC3.72□□□□□ -1.81
LITAFQ99732 CENPN-204ENST00000428963 971 ntTSL 2 BASIC3.72□□□□□ -1.81
LITAFQ99732 USP9YP14-201ENST00000430663 563 ntBASIC3.72□□□□□ -1.81
LITAFQ99732 PSMD10P2-201ENST00000432890 672 ntBASIC3.72□□□□□ -1.81
LITAFQ99732 RPL21P110-201ENST00000433345 446 ntBASIC3.72□□□□□ -1.81
LITAFQ99732 SEPT7P5-201ENST00000434048 306 ntBASIC3.72□□□□□ -1.81
LITAFQ99732 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC3.72□□□□□ -1.81
LITAFQ99732 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.72□□□□□ -1.81
LITAFQ99732 CR391992.1-201ENST00000438601 394 ntBASIC3.72□□□□□ -1.81
LITAFQ99732 ELOCP30-201ENST00000447108 299 ntBASIC3.72□□□□□ -1.81
LITAFQ99732 AL596266.1-201ENST00000448132 400 ntBASIC3.72□□□□□ -1.81
LITAFQ99732 COX6CP18-201ENST00000448769 222 ntBASIC3.72□□□□□ -1.81
LITAFQ99732 TPMTP4-201ENST00000450749 678 ntBASIC3.72□□□□□ -1.81
LITAFQ99732 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC3.72□□□□□ -1.81
LITAFQ99732 RN7SL372P-201ENST00000461982 298 ntBASIC3.72□□□□□ -1.81
LITAFQ99732 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
LITAFQ99732 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
LITAFQ99732 AC147055.4-201ENST00000504399 745 ntBASIC3.72□□□□□ -1.81
LITAFQ99732 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC3.72□□□□□ -1.81
LITAFQ99732 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
LITAFQ99732 AC112198.1-201ENST00000505369 1220 ntBASIC3.72□□□□□ -1.81
LITAFQ99732 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC3.72□□□□□ -1.81
LITAFQ99732 AC098799.3-201ENST00000506095 438 ntBASIC3.72□□□□□ -1.81
LITAFQ99732 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC3.72□□□□□ -1.81
LITAFQ99732 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC3.72□□□□□ -1.81
LITAFQ99732 HSPE1P23-201ENST00000509838 286 ntBASIC3.72□□□□□ -1.81
LITAFQ99732 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC3.72□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms