Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC5.85□□□□□ -1.47
CDK5RAP1Q96SZ6 ATP5LP3-201ENST00000514223 304 ntBASIC5.85□□□□□ -1.47
CDK5RAP1Q96SZ6 BX510359.5-201ENST00000515651 304 ntBASIC5.85□□□□□ -1.47
CDK5RAP1Q96SZ6 RN7SKP34-201ENST00000516142 244 ntBASIC5.85□□□□□ -1.47
CDK5RAP1Q96SZ6 AC067904.2-201ENST00000517322 1283 ntBASIC5.85□□□□□ -1.47
CDK5RAP1Q96SZ6 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC5.85□□□□□ -1.47
CDK5RAP1Q96SZ6 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC5.85□□□□□ -1.47
CDK5RAP1Q96SZ6 AC124293.1-201ENST00000530034 493 ntBASIC5.85□□□□□ -1.47
CDK5RAP1Q96SZ6 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC5.85□□□□□ -1.47
CDK5RAP1Q96SZ6 PDCL2P2-201ENST00000533651 189 ntBASIC5.85□□□□□ -1.47
CDK5RAP1Q96SZ6 AC005000.1-201ENST00000536192 288 ntBASIC5.85□□□□□ -1.47
CDK5RAP1Q96SZ6 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.85□□□□□ -1.47
CDK5RAP1Q96SZ6 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC5.85□□□□□ -1.47
CDK5RAP1Q96SZ6 AC087883.1-201ENST00000551882 391 ntBASIC5.85□□□□□ -1.47
CDK5RAP1Q96SZ6 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.85□□□□□ -1.47
CDK5RAP1Q96SZ6 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.85□□□□□ -1.47
CDK5RAP1Q96SZ6 EIF1P4-201ENST00000572664 335 ntBASIC5.85□□□□□ -1.47
CDK5RAP1Q96SZ6 AC027281.1-201ENST00000574178 758 ntBASIC5.85□□□□□ -1.47
CDK5RAP1Q96SZ6 AC124283.4-201ENST00000581815 456 ntBASIC5.85□□□□□ -1.47
CDK5RAP1Q96SZ6 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC5.85□□□□□ -1.47
CDK5RAP1Q96SZ6 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.85□□□□□ -1.47
CDK5RAP1Q96SZ6 AC012616.1-201ENST00000600294 197 ntBASIC5.85□□□□□ -1.47
CDK5RAP1Q96SZ6 AC073544.2-201ENST00000601155 540 ntBASIC5.85□□□□□ -1.47
CDK5RAP1Q96SZ6 IGKV1OR2-9-201ENST00000603957 287 ntBASIC5.85□□□□□ -1.47
CDK5RAP1Q96SZ6 IGKV1OR2-11-201ENST00000604120 287 ntBASIC5.85□□□□□ -1.47
CDK5RAP1Q96SZ6 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC5.85□□□□□ -1.47
CDK5RAP1Q96SZ6 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC5.85□□□□□ -1.47
CDK5RAP1Q96SZ6 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC5.85□□□□□ -1.47
CDK5RAP1Q96SZ6 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.85□□□□□ -1.47
CDK5RAP1Q96SZ6 AC109309.2-201ENST00000612597 332 ntBASIC5.85□□□□□ -1.47
CDK5RAP1Q96SZ6 AC122133.1-201ENST00000613964 233 ntBASIC5.85□□□□□ -1.47
CDK5RAP1Q96SZ6 AF246928.1-201ENST00000623768 87 ntBASIC5.85□□□□□ -1.47
CDK5RAP1Q96SZ6 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC5.85□□□□□ -1.47
CDK5RAP1Q96SZ6 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CDK5RAP1Q96SZ6 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC5.85□□□□□ -1.47
CDK5RAP1Q96SZ6 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.85□□□□□ -1.47
CDK5RAP1Q96SZ6 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CDK5RAP1Q96SZ6 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
CDK5RAP1Q96SZ6 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC5.84□□□□□ -1.47
CDK5RAP1Q96SZ6 MT-RNR2-201ENST00000387347 1559 ntBASIC5.84□□□□□ -1.47
CDK5RAP1Q96SZ6 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CDK5RAP1Q96SZ6 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CDK5RAP1Q96SZ6 THAP12P8-201ENST00000447914 2115 ntBASIC5.84□□□□□ -1.47
CDK5RAP1Q96SZ6 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CDK5RAP1Q96SZ6 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CDK5RAP1Q96SZ6 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
CDK5RAP1Q96SZ6 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.84□□□□□ -1.47
CDK5RAP1Q96SZ6 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.84□□□□□ -1.47
CDK5RAP1Q96SZ6 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
CDK5RAP1Q96SZ6 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.84□□□□□ -1.47
CDK5RAP1Q96SZ6 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CDK5RAP1Q96SZ6 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CDK5RAP1Q96SZ6 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
CDK5RAP1Q96SZ6 Y_RNA.6-201ENST00000362350 114 ntBASIC5.84□□□□□ -1.47
CDK5RAP1Q96SZ6 SNORA51.1-201ENST00000363243 140 ntBASIC5.84□□□□□ -1.47
CDK5RAP1Q96SZ6 RN7SKP6-201ENST00000364795 319 ntBASIC5.84□□□□□ -1.47
CDK5RAP1Q96SZ6 Y_RNA.303-201ENST00000364998 94 ntBASIC5.84□□□□□ -1.47
CDK5RAP1Q96SZ6 SNORD116.1-201ENST00000365628 92 ntBASIC5.84□□□□□ -1.47
CDK5RAP1Q96SZ6 AL353625.1-202ENST00000366273 571 ntBASIC5.84□□□□□ -1.47
CDK5RAP1Q96SZ6 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC5.84□□□□□ -1.47
CDK5RAP1Q96SZ6 snosnR66.1-201ENST00000391095 99 ntBASIC5.84□□□□□ -1.47
CDK5RAP1Q96SZ6 DNAJA1P3-201ENST00000399417 1194 ntBASIC5.84□□□□□ -1.47
CDK5RAP1Q96SZ6 RPS3AP24-201ENST00000407896 734 ntBASIC5.84□□□□□ -1.47
CDK5RAP1Q96SZ6 RN7SKP273-201ENST00000411392 314 ntBASIC5.84□□□□□ -1.47
CDK5RAP1Q96SZ6 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC5.84□□□□□ -1.47
CDK5RAP1Q96SZ6 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC5.84□□□□□ -1.47
CDK5RAP1Q96SZ6 ARAFP1-201ENST00000422172 605 ntBASIC5.84□□□□□ -1.47
CDK5RAP1Q96SZ6 OR10T1P-201ENST00000424327 947 ntBASIC5.84□□□□□ -1.47
CDK5RAP1Q96SZ6 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC5.84□□□□□ -1.47
CDK5RAP1Q96SZ6 NPM1P26-201ENST00000426339 738 ntBASIC5.84□□□□□ -1.47
CDK5RAP1Q96SZ6 MGAT2P2-201ENST00000427194 797 ntBASIC5.84□□□□□ -1.47
CDK5RAP1Q96SZ6 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC5.84□□□□□ -1.47
CDK5RAP1Q96SZ6 MOB1AP1-201ENST00000430903 535 ntBASIC5.84□□□□□ -1.47
CDK5RAP1Q96SZ6 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC5.84□□□□□ -1.47
CDK5RAP1Q96SZ6 VN1R54P-201ENST00000435210 1049 ntBASIC5.84□□□□□ -1.47
CDK5RAP1Q96SZ6 AC242426.1-201ENST00000435270 960 ntBASIC5.84□□□□□ -1.47
CDK5RAP1Q96SZ6 Z99127.2-201ENST00000441426 334 ntBASIC5.84□□□□□ -1.47
CDK5RAP1Q96SZ6 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC5.84□□□□□ -1.47
CDK5RAP1Q96SZ6 AL596266.1-201ENST00000448132 400 ntBASIC5.84□□□□□ -1.47
CDK5RAP1Q96SZ6 FDX1P2-201ENST00000450769 375 ntBASIC5.84□□□□□ -1.47
CDK5RAP1Q96SZ6 VDAC2P4-201ENST00000452925 711 ntBASIC5.84□□□□□ -1.47
CDK5RAP1Q96SZ6 MRPL35P4-201ENST00000453682 566 ntBASIC5.84□□□□□ -1.47
CDK5RAP1Q96SZ6 RPL12P39-201ENST00000455456 496 ntBASIC5.84□□□□□ -1.47
CDK5RAP1Q96SZ6 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CDK5RAP1Q96SZ6 RN7SL51P-201ENST00000468230 285 ntBASIC5.84□□□□□ -1.47
CDK5RAP1Q96SZ6 AC108693.1-201ENST00000496068 432 ntBASIC5.84□□□□□ -1.47
CDK5RAP1Q96SZ6 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC5.84□□□□□ -1.47
CDK5RAP1Q96SZ6 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC5.84□□□□□ -1.47
CDK5RAP1Q96SZ6 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC5.84□□□□□ -1.47
CDK5RAP1Q96SZ6 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC5.84□□□□□ -1.47
CDK5RAP1Q96SZ6 BUD31P1-201ENST00000521828 359 ntBASIC5.84□□□□□ -1.47
CDK5RAP1Q96SZ6 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC5.84□□□□□ -1.47
CDK5RAP1Q96SZ6 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.84□□□□□ -1.47
CDK5RAP1Q96SZ6 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CDK5RAP1Q96SZ6 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC5.84□□□□□ -1.47
CDK5RAP1Q96SZ6 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC5.84□□□□□ -1.47
CDK5RAP1Q96SZ6 AC104229.1-201ENST00000561364 255 ntBASIC5.84□□□□□ -1.47
CDK5RAP1Q96SZ6 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC5.84□□□□□ -1.47
CDK5RAP1Q96SZ6 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC5.84□□□□□ -1.47
CDK5RAP1Q96SZ6 RBM22P1-201ENST00000578589 1214 ntBASIC5.84□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms