Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
GAFA1Q96PS6 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
GAFA1Q96PS6 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC3.64□□□□□ -1.83
GAFA1Q96PS6 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
GAFA1Q96PS6 AC023632.6-201ENST00000624338 2177 ntBASIC3.63□□□□□ -1.83
GAFA1Q96PS6 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
GAFA1Q96PS6 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
GAFA1Q96PS6 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
GAFA1Q96PS6 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC3.63□□□□□ -1.83
GAFA1Q96PS6 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
GAFA1Q96PS6 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
GAFA1Q96PS6 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
GAFA1Q96PS6 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
GAFA1Q96PS6 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
GAFA1Q96PS6 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
GAFA1Q96PS6 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
GAFA1Q96PS6 AC010132.2-201ENST00000295493 1043 ntBASIC3.63□□□□□ -1.83
GAFA1Q96PS6 RNU4-39P-201ENST00000362455 127 ntBASIC3.63□□□□□ -1.83
GAFA1Q96PS6 RNU1-32P-201ENST00000363937 159 ntBASIC3.63□□□□□ -1.83
GAFA1Q96PS6 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC3.63□□□□□ -1.83
GAFA1Q96PS6 SNORA56-201ENST00000383966 129 ntBASIC3.63□□□□□ -1.83
GAFA1Q96PS6 U3.22-201ENST00000391120 215 ntBASIC3.63□□□□□ -1.83
GAFA1Q96PS6 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC3.63□□□□□ -1.83
GAFA1Q96PS6 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC3.63□□□□□ -1.83
GAFA1Q96PS6 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC3.63□□□□□ -1.83
GAFA1Q96PS6 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC3.63□□□□□ -1.83
GAFA1Q96PS6 RPL12P34-201ENST00000424532 479 ntBASIC3.63□□□□□ -1.83
GAFA1Q96PS6 AL732292.1-201ENST00000426692 226 ntBASIC3.63□□□□□ -1.83
GAFA1Q96PS6 FHP1-201ENST00000442741 703 ntBASIC3.63□□□□□ -1.83
GAFA1Q96PS6 RPL7P33-201ENST00000444159 742 ntBASIC3.63□□□□□ -1.83
GAFA1Q96PS6 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC3.63□□□□□ -1.83
GAFA1Q96PS6 RPL5P22-201ENST00000480199 884 ntBASIC3.63□□□□□ -1.83
GAFA1Q96PS6 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC3.63□□□□□ -1.83
GAFA1Q96PS6 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC3.63□□□□□ -1.83
GAFA1Q96PS6 AC025674.1-201ENST00000507074 324 ntBASIC3.63□□□□□ -1.83
GAFA1Q96PS6 AC010476.1-201ENST00000519111 851 ntBASIC3.63□□□□□ -1.83
GAFA1Q96PS6 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC3.63□□□□□ -1.83
GAFA1Q96PS6 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
GAFA1Q96PS6 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC3.63□□□□□ -1.83
GAFA1Q96PS6 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC3.63□□□□□ -1.83
GAFA1Q96PS6 AC021483.2-201ENST00000567415 758 ntBASIC3.63□□□□□ -1.83
GAFA1Q96PS6 MIR4433B-201ENST00000581329 102 ntBASIC3.63□□□□□ -1.83
GAFA1Q96PS6 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC3.63□□□□□ -1.83
GAFA1Q96PS6 AC107993.1-201ENST00000591343 684 ntBASIC3.63□□□□□ -1.83
GAFA1Q96PS6 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
GAFA1Q96PS6 AL034374.2-201ENST00000605281 548 ntBASIC3.63□□□□□ -1.83
GAFA1Q96PS6 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC3.63□□□□□ -1.83
GAFA1Q96PS6 AL021997.2-201ENST00000615674 271 ntBASIC3.63□□□□□ -1.83
GAFA1Q96PS6 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC3.63□□□□□ -1.83
GAFA1Q96PS6 AC140479.6-201ENST00000633535 357 ntBASIC3.63□□□□□ -1.83
GAFA1Q96PS6 AC010300.1-201ENST00000600671 5134 ntBASIC3.63□□□□□ -1.83
GAFA1Q96PS6 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
GAFA1Q96PS6 MTCO1P15-201ENST00000529569 1526 ntBASIC3.63□□□□□ -1.83
GAFA1Q96PS6 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC3.63□□□□□ -1.83
GAFA1Q96PS6 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
GAFA1Q96PS6 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
GAFA1Q96PS6 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC3.62□□□□□ -1.83
GAFA1Q96PS6 AC010266.2-201ENST00000564741 3255 ntBASIC3.62□□□□□ -1.83
GAFA1Q96PS6 AC006484.1-201ENST00000435086 1884 ntBASIC3.62□□□□□ -1.83
GAFA1Q96PS6 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
GAFA1Q96PS6 NRK-204ENST00000540278 1687 ntTSL 2 BASIC3.62□□□□□ -1.83
GAFA1Q96PS6 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
GAFA1Q96PS6 PMCHL2-202ENST00000450213 1917 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
GAFA1Q96PS6 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
GAFA1Q96PS6 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
GAFA1Q96PS6 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
GAFA1Q96PS6 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
GAFA1Q96PS6 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC3.62□□□□□ -1.83
GAFA1Q96PS6 EIF2AP4-201ENST00000424793 1781 ntBASIC3.62□□□□□ -1.83
GAFA1Q96PS6 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
GAFA1Q96PS6 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC3.62□□□□□ -1.83
GAFA1Q96PS6 RNA5SP175-201ENST00000364275 119 ntBASIC3.62□□□□□ -1.83
GAFA1Q96PS6 AL583835.1-201ENST00000399570 407 ntBASIC3.62□□□□□ -1.83
GAFA1Q96PS6 SNORA11F-201ENST00000408237 128 ntBASIC3.62□□□□□ -1.83
GAFA1Q96PS6 RN7SKP199-201ENST00000410325 305 ntBASIC3.62□□□□□ -1.83
GAFA1Q96PS6 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC3.62□□□□□ -1.83
GAFA1Q96PS6 RPS29P17-201ENST00000430795 166 ntBASIC3.62□□□□□ -1.83
GAFA1Q96PS6 RPL23AP52-201ENST00000439311 478 ntBASIC3.62□□□□□ -1.83
GAFA1Q96PS6 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC3.62□□□□□ -1.83
GAFA1Q96PS6 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC3.62□□□□□ -1.83
GAFA1Q96PS6 TPT1P13-201ENST00000449760 499 ntBASIC3.62□□□□□ -1.83
GAFA1Q96PS6 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC3.62□□□□□ -1.83
GAFA1Q96PS6 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC3.62□□□□□ -1.83
GAFA1Q96PS6 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC3.62□□□□□ -1.83
GAFA1Q96PS6 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC3.62□□□□□ -1.83
GAFA1Q96PS6 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC3.62□□□□□ -1.83
GAFA1Q96PS6 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC3.62□□□□□ -1.83
GAFA1Q96PS6 AC021146.3-201ENST00000511911 260 ntBASIC3.62□□□□□ -1.83
GAFA1Q96PS6 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC3.62□□□□□ -1.83
GAFA1Q96PS6 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
GAFA1Q96PS6 AC100770.1-201ENST00000532310 322 ntBASIC3.62□□□□□ -1.83
GAFA1Q96PS6 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC3.62□□□□□ -1.83
GAFA1Q96PS6 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC3.62□□□□□ -1.83
GAFA1Q96PS6 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC3.62□□□□□ -1.83
GAFA1Q96PS6 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC3.62□□□□□ -1.83
GAFA1Q96PS6 AC090515.3-201ENST00000560431 315 ntBASIC3.62□□□□□ -1.83
GAFA1Q96PS6 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC3.62□□□□□ -1.83
GAFA1Q96PS6 MIR4277-201ENST00000578298 84 ntBASIC3.62□□□□□ -1.83
GAFA1Q96PS6 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC3.62□□□□□ -1.83
GAFA1Q96PS6 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms