Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 KRTAP8-2P-201ENST00000440620 186 ntBASIC5.34□□□□□ -1.55
VPS50Q96JG6 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC5.34□□□□□ -1.55
VPS50Q96JG6 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC5.34□□□□□ -1.55
VPS50Q96JG6 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC5.34□□□□□ -1.55
VPS50Q96JG6 RN7SL583P-201ENST00000475692 287 ntBASIC5.34□□□□□ -1.55
VPS50Q96JG6 SIAH1P1-201ENST00000479411 923 ntBASIC5.34□□□□□ -1.55
VPS50Q96JG6 RN7SL629P-201ENST00000489622 285 ntBASIC5.34□□□□□ -1.55
VPS50Q96JG6 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
VPS50Q96JG6 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC5.34□□□□□ -1.55
VPS50Q96JG6 AC008837.1-201ENST00000511513 412 ntBASIC5.34□□□□□ -1.55
VPS50Q96JG6 RNA5SP362-201ENST00000516048 118 ntBASIC5.34□□□□□ -1.55
VPS50Q96JG6 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC5.34□□□□□ -1.55
VPS50Q96JG6 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC5.34□□□□□ -1.55
VPS50Q96JG6 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.34□□□□□ -1.55
VPS50Q96JG6 AC063977.5-201ENST00000601044 974 ntBASIC5.34□□□□□ -1.55
VPS50Q96JG6 AC013468.1-201ENST00000608680 598 ntBASIC5.34□□□□□ -1.55
VPS50Q96JG6 AL139124.1-201ENST00000609123 421 ntBASIC5.34□□□□□ -1.55
VPS50Q96JG6 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC5.34□□□□□ -1.55
VPS50Q96JG6 AC092106.3-201ENST00000611308 722 ntBASIC5.34□□□□□ -1.55
VPS50Q96JG6 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.34□□□□□ -1.55
VPS50Q96JG6 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
VPS50Q96JG6 AC013470.4-201ENST00000619978 986 ntBASIC5.34□□□□□ -1.55
VPS50Q96JG6 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
VPS50Q96JG6 MIR6837-201ENST00000620884 64 ntBASIC5.34□□□□□ -1.55
VPS50Q96JG6 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC5.34□□□□□ -1.55
VPS50Q96JG6 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
VPS50Q96JG6 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
VPS50Q96JG6 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
VPS50Q96JG6 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.34□□□□□ -1.56
VPS50Q96JG6 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
VPS50Q96JG6 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.56
VPS50Q96JG6 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.56
VPS50Q96JG6 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.34□□□□□ -1.56
VPS50Q96JG6 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
VPS50Q96JG6 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5.34□□□□□ -1.56
VPS50Q96JG6 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.33□□□□□ -1.56
VPS50Q96JG6 ZNF733P-202ENST00000444809 1573 ntBASIC5.33□□□□□ -1.56
VPS50Q96JG6 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
VPS50Q96JG6 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.33□□□□□ -1.56
VPS50Q96JG6 OR4F13P-202ENST00000560066 2054 ntBASIC5.33□□□□□ -1.56
VPS50Q96JG6 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
VPS50Q96JG6 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
VPS50Q96JG6 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.33□□□□□ -1.56
VPS50Q96JG6 AC114786.1-201ENST00000512892 1415 ntBASIC5.33□□□□□ -1.56
VPS50Q96JG6 AC015813.6-201ENST00000624409 5808 ntBASIC5.33□□□□□ -1.56
VPS50Q96JG6 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.33□□□□□ -1.56
VPS50Q96JG6 NF1-214ENST00000490416 1329 ntTSL 3 BASIC5.33□□□□□ -1.56
VPS50Q96JG6 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
VPS50Q96JG6 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
VPS50Q96JG6 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
VPS50Q96JG6 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
VPS50Q96JG6 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
VPS50Q96JG6 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
VPS50Q96JG6 SNORA64.1-201ENST00000362600 132 ntBASIC5.33□□□□□ -1.56
VPS50Q96JG6 RNU6-532P-201ENST00000384318 107 ntBASIC5.33□□□□□ -1.56
VPS50Q96JG6 RNY3P9-201ENST00000384727 106 ntBASIC5.33□□□□□ -1.56
VPS50Q96JG6 Y_RNA.578-201ENST00000390903 88 ntBASIC5.33□□□□□ -1.56
VPS50Q96JG6 AC005042.1-201ENST00000393397 800 ntBASIC5.33□□□□□ -1.56
VPS50Q96JG6 RPS27AP11-201ENST00000402798 447 ntBASIC5.33□□□□□ -1.56
VPS50Q96JG6 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC5.33□□□□□ -1.56
VPS50Q96JG6 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC5.33□□□□□ -1.56
VPS50Q96JG6 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC5.33□□□□□ -1.56
VPS50Q96JG6 OR6E1P-201ENST00000414424 923 ntBASIC5.33□□□□□ -1.56
VPS50Q96JG6 AL596448.1-201ENST00000415024 392 ntBASIC5.33□□□□□ -1.56
VPS50Q96JG6 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC5.33□□□□□ -1.56
VPS50Q96JG6 Z93019.1-201ENST00000416450 973 ntBASIC5.33□□□□□ -1.56
VPS50Q96JG6 RPS24P7-201ENST00000416921 246 ntBASIC5.33□□□□□ -1.56
VPS50Q96JG6 RPS3AP37-201ENST00000419176 745 ntBASIC5.33□□□□□ -1.56
VPS50Q96JG6 C1DP1-201ENST00000426049 402 ntBASIC5.33□□□□□ -1.56
VPS50Q96JG6 DPY19L1P2-201ENST00000426647 915 ntBASIC5.33□□□□□ -1.56
VPS50Q96JG6 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC5.33□□□□□ -1.56
VPS50Q96JG6 AC092647.3-201ENST00000443044 633 ntBASIC5.33□□□□□ -1.56
VPS50Q96JG6 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC5.33□□□□□ -1.56
VPS50Q96JG6 MTND2P22-201ENST00000444325 1033 ntBASIC5.33□□□□□ -1.56
VPS50Q96JG6 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC5.33□□□□□ -1.56
VPS50Q96JG6 AC022431.1-201ENST00000450941 438 ntBASIC5.33□□□□□ -1.56
VPS50Q96JG6 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC5.33□□□□□ -1.56
VPS50Q96JG6 AL133445.1-201ENST00000467051 452 ntBASIC5.33□□□□□ -1.56
VPS50Q96JG6 AL049874.2-201ENST00000492636 288 ntBASIC5.33□□□□□ -1.56
VPS50Q96JG6 DUTP1-201ENST00000493631 470 ntBASIC5.33□□□□□ -1.56
VPS50Q96JG6 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC5.33□□□□□ -1.56
VPS50Q96JG6 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC5.33□□□□□ -1.56
VPS50Q96JG6 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC5.33□□□□□ -1.56
VPS50Q96JG6 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC5.33□□□□□ -1.56
VPS50Q96JG6 MRPS16P1-201ENST00000523462 412 ntBASIC5.33□□□□□ -1.56
VPS50Q96JG6 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC5.33□□□□□ -1.56
VPS50Q96JG6 SULT1C2P2-201ENST00000562517 294 ntBASIC5.33□□□□□ -1.56
VPS50Q96JG6 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
VPS50Q96JG6 AC145350.1-201ENST00000567426 208 ntBASIC5.33□□□□□ -1.56
VPS50Q96JG6 MIR1273E-201ENST00000581165 102 ntBASIC5.33□□□□□ -1.56
VPS50Q96JG6 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC5.33□□□□□ -1.56
VPS50Q96JG6 VN1R78P-201ENST00000597393 564 ntBASIC5.33□□□□□ -1.56
VPS50Q96JG6 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC5.33□□□□□ -1.56
VPS50Q96JG6 HCG18-243ENST00000602498 327 ntTSL 3 BASIC5.33□□□□□ -1.56
VPS50Q96JG6 AC008536.1-201ENST00000602872 669 ntBASIC5.33□□□□□ -1.56
VPS50Q96JG6 DUXAP3-201ENST00000603616 594 ntBASIC5.33□□□□□ -1.56
VPS50Q96JG6 MTND3P19-201ENST00000603825 345 ntBASIC5.33□□□□□ -1.56
VPS50Q96JG6 AL049844.2-201ENST00000604280 628 ntBASIC5.33□□□□□ -1.56
VPS50Q96JG6 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
VPS50Q96JG6 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 118.4 ms