Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
PDLIM5Q96HC4 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.8□□□□□ -1.64
PDLIM5Q96HC4 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
PDLIM5Q96HC4 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
PDLIM5Q96HC4 HSPA8P18-201ENST00000439846 1928 ntBASIC4.8□□□□□ -1.64
PDLIM5Q96HC4 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
PDLIM5Q96HC4 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.8□□□□□ -1.64
PDLIM5Q96HC4 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC4.8□□□□□ -1.64
PDLIM5Q96HC4 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
PDLIM5Q96HC4 MIR765-201ENST00000390226 114 ntBASIC4.8□□□□□ -1.64
PDLIM5Q96HC4 AL357515.1-201ENST00000402967 542 ntBASIC4.8□□□□□ -1.64
PDLIM5Q96HC4 AP002530.1-201ENST00000405705 684 ntBASIC4.8□□□□□ -1.64
PDLIM5Q96HC4 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC4.8□□□□□ -1.64
PDLIM5Q96HC4 AC073136.2-201ENST00000417282 849 ntBASIC4.8□□□□□ -1.64
PDLIM5Q96HC4 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.8□□□□□ -1.64
PDLIM5Q96HC4 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC4.8□□□□□ -1.64
PDLIM5Q96HC4 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC4.8□□□□□ -1.64
PDLIM5Q96HC4 NMNAT1P2-201ENST00000435192 860 ntBASIC4.8□□□□□ -1.64
PDLIM5Q96HC4 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC4.8□□□□□ -1.64
PDLIM5Q96HC4 TRAPPC13P1-201ENST00000435991 1062 ntBASIC4.8□□□□□ -1.64
PDLIM5Q96HC4 TMX2P1-201ENST00000436507 708 ntBASIC4.8□□□□□ -1.64
PDLIM5Q96HC4 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC4.8□□□□□ -1.64
PDLIM5Q96HC4 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC4.8□□□□□ -1.64
PDLIM5Q96HC4 YWHAZP2-201ENST00000440317 728 ntBASIC4.8□□□□□ -1.64
PDLIM5Q96HC4 AL357520.1-201ENST00000441557 453 ntBASIC4.8□□□□□ -1.64
PDLIM5Q96HC4 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC4.8□□□□□ -1.64
PDLIM5Q96HC4 EEF1B2P5-201ENST00000444820 548 ntBASIC4.8□□□□□ -1.64
PDLIM5Q96HC4 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC4.8□□□□□ -1.64
PDLIM5Q96HC4 AL031584.1-201ENST00000447169 754 ntBASIC4.8□□□□□ -1.64
PDLIM5Q96HC4 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC4.8□□□□□ -1.64
PDLIM5Q96HC4 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC4.8□□□□□ -1.64
PDLIM5Q96HC4 RHEBP2-201ENST00000450289 600 ntBASIC4.8□□□□□ -1.64
PDLIM5Q96HC4 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC4.8□□□□□ -1.64
PDLIM5Q96HC4 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.8□□□□□ -1.64
PDLIM5Q96HC4 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.8□□□□□ -1.64
PDLIM5Q96HC4 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC4.8□□□□□ -1.64
PDLIM5Q96HC4 RN7SL346P-201ENST00000491561 294 ntBASIC4.8□□□□□ -1.64
PDLIM5Q96HC4 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
PDLIM5Q96HC4 AC006499.3-201ENST00000506077 748 ntBASIC4.8□□□□□ -1.64
PDLIM5Q96HC4 RNA5SP392-201ENST00000516905 112 ntBASIC4.8□□□□□ -1.64
PDLIM5Q96HC4 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC4.8□□□□□ -1.64
PDLIM5Q96HC4 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.8□□□□□ -1.64
PDLIM5Q96HC4 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC4.8□□□□□ -1.64
PDLIM5Q96HC4 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC4.8□□□□□ -1.64
PDLIM5Q96HC4 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC4.8□□□□□ -1.64
PDLIM5Q96HC4 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC4.8□□□□□ -1.64
PDLIM5Q96HC4 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC4.8□□□□□ -1.64
PDLIM5Q96HC4 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC4.8□□□□□ -1.64
PDLIM5Q96HC4 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.8□□□□□ -1.64
PDLIM5Q96HC4 SNORA74C-1-201ENST00000580726 201 ntBASIC4.8□□□□□ -1.64
PDLIM5Q96HC4 AL121612.2-201ENST00000612261 482 ntBASIC4.8□□□□□ -1.64
PDLIM5Q96HC4 AL109620.1-201ENST00000618738 1197 ntBASIC4.8□□□□□ -1.64
PDLIM5Q96HC4 AC019206.1-201ENST00000621938 425 ntBASIC4.8□□□□□ -1.64
PDLIM5Q96HC4 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.8□□□□□ -1.64
PDLIM5Q96HC4 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC4.8□□□□□ -1.64
PDLIM5Q96HC4 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
PDLIM5Q96HC4 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.8□□□□□ -1.64
PDLIM5Q96HC4 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
PDLIM5Q96HC4 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.8□□□□□ -1.64
PDLIM5Q96HC4 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
PDLIM5Q96HC4 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
PDLIM5Q96HC4 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
PDLIM5Q96HC4 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
PDLIM5Q96HC4 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC4.8□□□□□ -1.64
PDLIM5Q96HC4 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.8□□□□□ -1.64
PDLIM5Q96HC4 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PDLIM5Q96HC4 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
PDLIM5Q96HC4 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
PDLIM5Q96HC4 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
PDLIM5Q96HC4 IGKV7-3-201ENST00000357453 298 ntBASIC4.79□□□□□ -1.64
PDLIM5Q96HC4 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC4.79□□□□□ -1.64
PDLIM5Q96HC4 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
PDLIM5Q96HC4 RNU1-106P-201ENST00000384382 164 ntBASIC4.79□□□□□ -1.64
PDLIM5Q96HC4 AP000580.1-201ENST00000404439 358 ntBASIC4.79□□□□□ -1.64
PDLIM5Q96HC4 AL590290.1-201ENST00000405336 380 ntBASIC4.79□□□□□ -1.64
PDLIM5Q96HC4 U3.35-201ENST00000408405 208 ntBASIC4.79□□□□□ -1.64
PDLIM5Q96HC4 VN1R37P-201ENST00000419096 748 ntBASIC4.79□□□□□ -1.64
PDLIM5Q96HC4 RPL36AP10-201ENST00000421785 322 ntBASIC4.79□□□□□ -1.64
PDLIM5Q96HC4 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.79□□□□□ -1.64
PDLIM5Q96HC4 SEC63P1-201ENST00000425785 1258 ntBASIC4.79□□□□□ -1.64
PDLIM5Q96HC4 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC4.79□□□□□ -1.64
PDLIM5Q96HC4 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC4.79□□□□□ -1.64
PDLIM5Q96HC4 ZFAND6P1-201ENST00000434138 605 ntBASIC4.79□□□□□ -1.64
PDLIM5Q96HC4 RPL7P11-201ENST00000437586 658 ntBASIC4.79□□□□□ -1.64
PDLIM5Q96HC4 MED6P1-201ENST00000439659 713 ntBASIC4.79□□□□□ -1.64
PDLIM5Q96HC4 XKRY2-201ENST00000442362 1093 ntBASIC4.79□□□□□ -1.64
PDLIM5Q96HC4 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC4.79□□□□□ -1.64
PDLIM5Q96HC4 RPL23AP56-201ENST00000460778 453 ntBASIC4.79□□□□□ -1.64
PDLIM5Q96HC4 AC005532.2-201ENST00000467154 373 ntBASIC4.79□□□□□ -1.64
PDLIM5Q96HC4 AC006511.1-201ENST00000470614 315 ntBASIC4.79□□□□□ -1.64
PDLIM5Q96HC4 RN7SL558P-201ENST00000497468 299 ntBASIC4.79□□□□□ -1.64
PDLIM5Q96HC4 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC4.79□□□□□ -1.64
PDLIM5Q96HC4 AC025459.1-201ENST00000504072 156 ntBASIC4.79□□□□□ -1.64
PDLIM5Q96HC4 AC093763.2-201ENST00000505334 1223 ntBASIC4.79□□□□□ -1.64
PDLIM5Q96HC4 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC4.79□□□□□ -1.64
PDLIM5Q96HC4 MRPS33P2-201ENST00000507850 322 ntBASIC4.79□□□□□ -1.64
PDLIM5Q96HC4 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.79□□□□□ -1.64
PDLIM5Q96HC4 PGBD4P4-201ENST00000509673 613 ntBASIC4.79□□□□□ -1.64
PDLIM5Q96HC4 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC4.79□□□□□ -1.64
PDLIM5Q96HC4 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms