Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
CTHRC1Q96CG8 MTCO1P7-201ENST00000419523 1542 ntBASIC5.09□□□□□ -1.59
CTHRC1Q96CG8 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.09□□□□□ -1.59
CTHRC1Q96CG8 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
CTHRC1Q96CG8 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CTHRC1Q96CG8 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CTHRC1Q96CG8 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
CTHRC1Q96CG8 MIR133A2-201ENST00000347538 102 ntBASIC5.09□□□□□ -1.59
CTHRC1Q96CG8 RNA5SP234-201ENST00000363916 119 ntBASIC5.09□□□□□ -1.59
CTHRC1Q96CG8 snoZ40.1-201ENST00000364540 72 ntBASIC5.09□□□□□ -1.59
CTHRC1Q96CG8 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CTHRC1Q96CG8 SNORD56.6-201ENST00000384569 71 ntBASIC5.09□□□□□ -1.59
CTHRC1Q96CG8 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CTHRC1Q96CG8 RN7SKP229-201ENST00000410465 302 ntBASIC5.09□□□□□ -1.59
CTHRC1Q96CG8 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC5.09□□□□□ -1.59
CTHRC1Q96CG8 Z93019.1-201ENST00000416450 973 ntBASIC5.09□□□□□ -1.59
CTHRC1Q96CG8 AC027644.1-201ENST00000419595 298 ntBASIC5.09□□□□□ -1.59
CTHRC1Q96CG8 AC234781.2-201ENST00000426370 994 ntBASIC5.09□□□□□ -1.59
CTHRC1Q96CG8 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.09□□□□□ -1.59
CTHRC1Q96CG8 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC5.09□□□□□ -1.59
CTHRC1Q96CG8 CDY14P-201ENST00000431260 1014 ntBASIC5.09□□□□□ -1.59
CTHRC1Q96CG8 AC012075.1-201ENST00000436549 580 ntBASIC5.09□□□□□ -1.59
CTHRC1Q96CG8 KRTAP8-2P-201ENST00000440620 186 ntBASIC5.09□□□□□ -1.59
CTHRC1Q96CG8 CDY12P-201ENST00000440679 1015 ntBASIC5.09□□□□□ -1.59
CTHRC1Q96CG8 MED28P3-201ENST00000444288 531 ntBASIC5.09□□□□□ -1.59
CTHRC1Q96CG8 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC5.09□□□□□ -1.59
CTHRC1Q96CG8 CDY13P-201ENST00000445813 1015 ntBASIC5.09□□□□□ -1.59
CTHRC1Q96CG8 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC5.09□□□□□ -1.59
CTHRC1Q96CG8 AL161722.1-201ENST00000446972 1032 ntBASIC5.09□□□□□ -1.59
CTHRC1Q96CG8 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC5.09□□□□□ -1.59
CTHRC1Q96CG8 AL672138.1-201ENST00000450604 1015 ntBASIC5.09□□□□□ -1.59
CTHRC1Q96CG8 CDY23P-201ENST00000451661 1014 ntBASIC5.09□□□□□ -1.59
CTHRC1Q96CG8 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.09□□□□□ -1.59
CTHRC1Q96CG8 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC5.09□□□□□ -1.59
CTHRC1Q96CG8 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC5.09□□□□□ -1.59
CTHRC1Q96CG8 AC091544.1-201ENST00000484702 348 ntBASIC5.09□□□□□ -1.59
CTHRC1Q96CG8 AC090638.1-201ENST00000498296 909 ntBASIC5.09□□□□□ -1.59
CTHRC1Q96CG8 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CTHRC1Q96CG8 HMGB1P44-201ENST00000508597 572 ntBASIC5.09□□□□□ -1.59
CTHRC1Q96CG8 MTND6P2-201ENST00000512226 524 ntBASIC5.09□□□□□ -1.59
CTHRC1Q96CG8 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC5.09□□□□□ -1.59
CTHRC1Q96CG8 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.09□□□□□ -1.59
CTHRC1Q96CG8 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC5.09□□□□□ -1.59
CTHRC1Q96CG8 AC087373.1-201ENST00000524920 491 ntBASIC5.09□□□□□ -1.59
CTHRC1Q96CG8 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC5.09□□□□□ -1.59
CTHRC1Q96CG8 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC5.09□□□□□ -1.59
CTHRC1Q96CG8 AP002812.4-201ENST00000532139 286 ntBASIC5.09□□□□□ -1.59
CTHRC1Q96CG8 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC5.09□□□□□ -1.59
CTHRC1Q96CG8 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC5.09□□□□□ -1.59
CTHRC1Q96CG8 AC008015.1-201ENST00000555505 465 ntBASIC5.09□□□□□ -1.59
CTHRC1Q96CG8 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC5.09□□□□□ -1.59
CTHRC1Q96CG8 AADACP1-206ENST00000561502 1193 ntBASIC5.09□□□□□ -1.59
CTHRC1Q96CG8 PDCD6IPP2-207ENST00000566321 1069 ntBASIC5.09□□□□□ -1.59
CTHRC1Q96CG8 AP005403.1-201ENST00000579720 229 ntBASIC5.09□□□□□ -1.59
CTHRC1Q96CG8 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC5.09□□□□□ -1.59
CTHRC1Q96CG8 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC5.09□□□□□ -1.59
CTHRC1Q96CG8 EIF1P6-201ENST00000600054 334 ntBASIC5.09□□□□□ -1.59
CTHRC1Q96CG8 BNIP3P4-201ENST00000604946 565 ntBASIC5.09□□□□□ -1.59
CTHRC1Q96CG8 AP000894.4-201ENST00000610185 483 ntBASIC5.09□□□□□ -1.59
CTHRC1Q96CG8 AL592148.2-201ENST00000612210 372 ntBASIC5.09□□□□□ -1.59
CTHRC1Q96CG8 AC022467.1-201ENST00000614738 749 ntBASIC5.09□□□□□ -1.59
CTHRC1Q96CG8 AC103706.2-201ENST00000638080 240 ntBASIC5.09□□□□□ -1.59
CTHRC1Q96CG8 MFSD8-245ENST00000641743 948 ntBASIC5.09□□□□□ -1.59
CTHRC1Q96CG8 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CTHRC1Q96CG8 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CTHRC1Q96CG8 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CTHRC1Q96CG8 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.09□□□□□ -1.59
CTHRC1Q96CG8 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
CTHRC1Q96CG8 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.09□□□□□ -1.6
CTHRC1Q96CG8 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.6
CTHRC1Q96CG8 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.6
CTHRC1Q96CG8 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
CTHRC1Q96CG8 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.08□□□□□ -1.6
CTHRC1Q96CG8 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CTHRC1Q96CG8 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
CTHRC1Q96CG8 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.08□□□□□ -1.6
CTHRC1Q96CG8 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.08□□□□□ -1.6
CTHRC1Q96CG8 CASC19-206ENST00000641028 1430 ntBASIC5.08□□□□□ -1.6
CTHRC1Q96CG8 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
CTHRC1Q96CG8 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.08□□□□□ -1.6
CTHRC1Q96CG8 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CTHRC1Q96CG8 AMELX-201ENST00000348912 737 ntTSL 5 BASIC5.08□□□□□ -1.6
CTHRC1Q96CG8 SNORA62.2-201ENST00000364672 152 ntBASIC5.08□□□□□ -1.6
CTHRC1Q96CG8 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CTHRC1Q96CG8 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CTHRC1Q96CG8 SNORA16A-201ENST00000384342 137 ntBASIC5.08□□□□□ -1.6
CTHRC1Q96CG8 DBIP1-201ENST00000401435 260 ntBASIC5.08□□□□□ -1.6
CTHRC1Q96CG8 RN7SKP182-201ENST00000410772 298 ntBASIC5.08□□□□□ -1.6
CTHRC1Q96CG8 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC5.08□□□□□ -1.6
CTHRC1Q96CG8 AC006960.1-201ENST00000419980 153 ntBASIC5.08□□□□□ -1.6
CTHRC1Q96CG8 RPL7P53-201ENST00000421245 739 ntBASIC5.08□□□□□ -1.6
CTHRC1Q96CG8 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC5.08□□□□□ -1.6
CTHRC1Q96CG8 AC009784.1-201ENST00000426484 460 ntBASIC5.08□□□□□ -1.6
CTHRC1Q96CG8 FAM96AP1-201ENST00000430879 482 ntBASIC5.08□□□□□ -1.6
CTHRC1Q96CG8 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC5.08□□□□□ -1.6
CTHRC1Q96CG8 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC5.08□□□□□ -1.6
CTHRC1Q96CG8 AC105399.1-202ENST00000447303 205 ntBASIC5.08□□□□□ -1.6
CTHRC1Q96CG8 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.08□□□□□ -1.6
CTHRC1Q96CG8 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC5.08□□□□□ -1.6
CTHRC1Q96CG8 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms