Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
RFT1Q96AA3 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.44□□□□□ -1.7
RFT1Q96AA3 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.44□□□□□ -1.7
RFT1Q96AA3 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC4.44□□□□□ -1.7
RFT1Q96AA3 OR8V1P-201ENST00000395193 873 ntBASIC4.44□□□□□ -1.7
RFT1Q96AA3 HMGB1P13-201ENST00000406019 642 ntBASIC4.44□□□□□ -1.7
RFT1Q96AA3 AL158825.1-201ENST00000414735 521 ntBASIC4.44□□□□□ -1.7
RFT1Q96AA3 AL133325.1-201ENST00000421090 382 ntBASIC4.44□□□□□ -1.7
RFT1Q96AA3 PNRC2P1-201ENST00000423940 420 ntBASIC4.44□□□□□ -1.7
RFT1Q96AA3 COX6CP13-201ENST00000428703 226 ntBASIC4.44□□□□□ -1.7
RFT1Q96AA3 FAM96AP1-201ENST00000430879 482 ntBASIC4.44□□□□□ -1.7
RFT1Q96AA3 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
RFT1Q96AA3 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC4.44□□□□□ -1.7
RFT1Q96AA3 AL138899.2-201ENST00000439139 499 ntBASIC4.44□□□□□ -1.7
RFT1Q96AA3 RPS29P10-201ENST00000439197 166 ntBASIC4.44□□□□□ -1.7
RFT1Q96AA3 RPS11P7-201ENST00000442125 465 ntBASIC4.44□□□□□ -1.7
RFT1Q96AA3 AC097499.1-201ENST00000444277 208 ntBASIC4.44□□□□□ -1.7
RFT1Q96AA3 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC4.44□□□□□ -1.7
RFT1Q96AA3 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC4.44□□□□□ -1.7
RFT1Q96AA3 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.44□□□□□ -1.7
RFT1Q96AA3 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC4.44□□□□□ -1.7
RFT1Q96AA3 RPL23AP12-201ENST00000467573 473 ntBASIC4.44□□□□□ -1.7
RFT1Q96AA3 AC106806.2-201ENST00000509365 500 ntBASIC4.44□□□□□ -1.7
RFT1Q96AA3 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC4.44□□□□□ -1.7
RFT1Q96AA3 NDUFB4P12-201ENST00000513465 390 ntBASIC4.44□□□□□ -1.7
RFT1Q96AA3 RN7SKP70-201ENST00000516655 271 ntBASIC4.44□□□□□ -1.7
RFT1Q96AA3 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.44□□□□□ -1.7
RFT1Q96AA3 IGLVIV-64-201ENST00000518581 301 ntBASIC4.44□□□□□ -1.7
RFT1Q96AA3 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC4.44□□□□□ -1.7
RFT1Q96AA3 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
RFT1Q96AA3 AC005868.1-201ENST00000536421 331 ntBASIC4.44□□□□□ -1.7
RFT1Q96AA3 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.44□□□□□ -1.7
RFT1Q96AA3 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.44□□□□□ -1.7
RFT1Q96AA3 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC4.44□□□□□ -1.7
RFT1Q96AA3 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC4.44□□□□□ -1.7
RFT1Q96AA3 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC4.44□□□□□ -1.7
RFT1Q96AA3 NDUFA5P11-201ENST00000567995 343 ntBASIC4.44□□□□□ -1.7
RFT1Q96AA3 MYLK-221ENST00000583087 678 ntTSL 4 BASIC4.44□□□□□ -1.7
RFT1Q96AA3 AC123786.2-201ENST00000603459 275 ntBASIC4.44□□□□□ -1.7
RFT1Q96AA3 AC090525.3-201ENST00000605601 189 ntBASIC4.44□□□□□ -1.7
RFT1Q96AA3 MIR6778-201ENST00000617912 73 ntBASIC4.44□□□□□ -1.7
RFT1Q96AA3 AC005840.5-201ENST00000619166 599 ntBASIC4.44□□□□□ -1.7
RFT1Q96AA3 AC127024.6-201ENST00000621598 424 ntBASIC4.44□□□□□ -1.7
RFT1Q96AA3 AC067931.1-201ENST00000624190 671 ntBASIC4.44□□□□□ -1.7
RFT1Q96AA3 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC4.44□□□□□ -1.7
RFT1Q96AA3 AP000720.1-201ENST00000625091 483 ntBASIC4.44□□□□□ -1.7
RFT1Q96AA3 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC4.44□□□□□ -1.7
RFT1Q96AA3 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC4.44□□□□□ -1.7
RFT1Q96AA3 MIR1910-201ENST00000636955 80 ntBASIC4.44□□□□□ -1.7
RFT1Q96AA3 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
RFT1Q96AA3 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.44□□□□□ -1.7
RFT1Q96AA3 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
RFT1Q96AA3 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.44□□□□□ -1.7
RFT1Q96AA3 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
RFT1Q96AA3 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
RFT1Q96AA3 AC074029.4-201ENST00000624796 1859 ntBASIC4.43□□□□□ -1.7
RFT1Q96AA3 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
RFT1Q96AA3 LINC01109-201ENST00000603837 3081 ntBASIC4.43□□□□□ -1.7
RFT1Q96AA3 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
RFT1Q96AA3 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
RFT1Q96AA3 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
RFT1Q96AA3 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
RFT1Q96AA3 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
RFT1Q96AA3 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
RFT1Q96AA3 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
RFT1Q96AA3 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
RFT1Q96AA3 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
RFT1Q96AA3 RNA5SP90-201ENST00000364801 99 ntBASIC4.43□□□□□ -1.7
RFT1Q96AA3 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
RFT1Q96AA3 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
RFT1Q96AA3 MIR708-201ENST00000390708 88 ntBASIC4.43□□□□□ -1.7
RFT1Q96AA3 RNU6-796P-201ENST00000391086 107 ntBASIC4.43□□□□□ -1.7
RFT1Q96AA3 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC4.43□□□□□ -1.7
RFT1Q96AA3 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
RFT1Q96AA3 AL390774.1-201ENST00000411924 246 ntBASIC4.43□□□□□ -1.7
RFT1Q96AA3 AC013404.1-201ENST00000413068 249 ntBASIC4.43□□□□□ -1.7
RFT1Q96AA3 TRGV6-201ENST00000417928 299 ntBASIC4.43□□□□□ -1.7
RFT1Q96AA3 RPS12P5-201ENST00000423449 371 ntBASIC4.43□□□□□ -1.7
RFT1Q96AA3 GTF2IP2-201ENST00000424290 697 ntBASIC4.43□□□□□ -1.7
RFT1Q96AA3 FO393419.3-201ENST00000428741 282 ntBASIC4.43□□□□□ -1.7
RFT1Q96AA3 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.43□□□□□ -1.7
RFT1Q96AA3 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC4.43□□□□□ -1.7
RFT1Q96AA3 NMNAT1P2-201ENST00000435192 860 ntBASIC4.43□□□□□ -1.7
RFT1Q96AA3 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC4.43□□□□□ -1.7
RFT1Q96AA3 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.43□□□□□ -1.7
RFT1Q96AA3 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC4.43□□□□□ -1.7
RFT1Q96AA3 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
RFT1Q96AA3 EIF1P7-201ENST00000487533 337 ntBASIC4.43□□□□□ -1.7
RFT1Q96AA3 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC4.43□□□□□ -1.7
RFT1Q96AA3 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC4.43□□□□□ -1.7
RFT1Q96AA3 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC4.43□□□□□ -1.7
RFT1Q96AA3 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
RFT1Q96AA3 ASB8-215ENST00000540782 659 ntTSL 3 BASIC4.43□□□□□ -1.7
RFT1Q96AA3 CR383656.14-201ENST00000551951 406 ntBASIC4.43□□□□□ -1.7
RFT1Q96AA3 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.43□□□□□ -1.7
RFT1Q96AA3 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC4.43□□□□□ -1.7
RFT1Q96AA3 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
RFT1Q96AA3 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC4.43□□□□□ -1.7
RFT1Q96AA3 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.43□□□□□ -1.7
RFT1Q96AA3 AC018618.2-201ENST00000604770 446 ntBASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms